RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 FBXL12Q9NXK8 326 aa16.17■□□□□ 0.18
USB1-215ENST00000569252 WASF2Q9Y6W5 498 aa16.17■□□□□ 0.18
USB1-215ENST00000569252 SHROOM3Q8TF72 1996 aa16.17■□□□□ 0.18
USB1-215ENST00000569252 PMPCBO75439 489 aa16.16■□□□□ 0.18
USB1-215ENST00000569252 PIGNO95427 931 aa16.16■□□□□ 0.18
USB1-215ENST00000569252 CTSLP07711 333 aa16.16■□□□□ 0.18
USB1-215ENST00000569252 ETS1P14921 441 aa16.16■□□□□ 0.18
USB1-215ENST00000569252 ITGB7P26010 798 aa16.16■□□□□ 0.18
USB1-215ENST00000569252 CD68P34810 354 aaPredicted RBP16.16■□□□□ 0.18
USB1-215ENST00000569252 ADCY8P40145 1251 aa16.16■□□□□ 0.18
USB1-215ENST00000569252 SUOXP51687 545 aa16.16■□□□□ 0.18
USB1-215ENST00000569252 NIPAL4Q0D2K0 466 aa16.16■□□□□ 0.18
USB1-215ENST00000569252 TRIP13Q15645 432 aaPredicted RBP16.16■□□□□ 0.18
USB1-215ENST00000569252 PCSK7Q16549 785 aa16.16■□□□□ 0.18
USB1-215ENST00000569252 ERAP2Q6P179 960 aa16.16■□□□□ 0.18
USB1-215ENST00000569252 TTC27Q6P3X3 843 aa16.16■□□□□ 0.18
USB1-215ENST00000569252 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.16■□□□□ 0.18
USB1-215ENST00000569252 USP30Q70CQ3 517 aa16.16■□□□□ 0.18
USB1-215ENST00000569252 SPATA22Q8NHS9 363 aa16.16■□□□□ 0.18
USB1-215ENST00000569252 ARRDC2Q8TBH0 407 aa16.16■□□□□ 0.18
USB1-215ENST00000569252 SPACA7Q96KW9 195 aa16.16■□□□□ 0.18
USB1-215ENST00000569252 PCDH9Q9HC56 1237 aa16.16■□□□□ 0.18
USB1-215ENST00000569252 ITM2CQ9NQX7 267 aa16.16■□□□□ 0.18
USB1-215ENST00000569252 RAB6BQ9NRW1 208 aa16.16■□□□□ 0.18
USB1-215ENST00000569252 UBP1Q9NZI7 540 aa16.16■□□□□ 0.18
USB1-215ENST00000569252 DKK3Q9UBP4 350 aa16.16■□□□□ 0.18
USB1-215ENST00000569252 SARDHQ9UL12 918 aa16.16■□□□□ 0.18
USB1-215ENST00000569252 PCDHB9Q9Y5E1 797 aa16.16■□□□□ 0.18
USB1-215ENST00000569252 CCDC163A0A0D9SF12 145 aa16.15■□□□□ 0.18
USB1-215ENST00000569252 A0A1W2PP55 124 aa16.15■□□□□ 0.18
USB1-215ENST00000569252 C16orf96A6NNT2 1141 aa16.15■□□□□ 0.18
USB1-215ENST00000569252 F5H423 210 aaPredicted RBP16.15■□□□□ 0.18
USB1-215ENST00000569252 NEMP1O14524 444 aa16.15■□□□□ 0.18
USB1-215ENST00000569252 MAP3K13O43283 966 aa16.15■□□□□ 0.18
USB1-215ENST00000569252 ZSCAN5DPP0CG00 497 aa16.15■□□□□ 0.18
USB1-215ENST00000569252 SPINK2P20155 84 aa16.15■□□□□ 0.18
USB1-215ENST00000569252 PSMB4P28070 264 aa16.15■□□□□ 0.18
USB1-215ENST00000569252 HOXA6P31267 233 aa16.15■□□□□ 0.18
USB1-215ENST00000569252 RPL22P35268 128 aaKnown RBP16.15■□□□□ 0.18
USB1-215ENST00000569252 NEK3P51956 506 aa16.15■□□□□ 0.18
USB1-215ENST00000569252 BASP1P80723 227 aaKnown RBP16.15■□□□□ 0.18
USB1-215ENST00000569252 SARNPP82979 210 aaKnown RBP16.15■□□□□ 0.18
USB1-215ENST00000569252 SKOR1P84550 965 aa16.15■□□□□ 0.18
USB1-215ENST00000569252 CDK18Q07002 472 aa16.15■□□□□ 0.18
USB1-215ENST00000569252 C2orf54Q08AI8 447 aa16.15■□□□□ 0.18
USB1-215ENST00000569252 GPS1Q13098 491 aa16.15■□□□□ 0.18
USB1-215ENST00000569252 SLC14A2Q15849 920 aa16.15■□□□□ 0.18
USB1-215ENST00000569252 ERN2Q76MJ5 926 aaKnown RBP16.15■□□□□ 0.18
USB1-215ENST00000569252 ZNF572Q7Z3I7 529 aaPredicted RBP16.15■□□□□ 0.18
USB1-215ENST00000569252 KDELC2Q7Z4H8 507 aa16.15■□□□□ 0.18
USB1-215ENST00000569252 PCGF5Q86SE9 256 aa16.15■□□□□ 0.18
USB1-215ENST00000569252 WDR5BQ86VZ2 330 aa16.15■□□□□ 0.18
USB1-215ENST00000569252 TAB3Q8N5C8 712 aaPredicted RBP16.15■□□□□ 0.18
USB1-215ENST00000569252 MDGA1Q8NFP4 955 aa16.15■□□□□ 0.18
USB1-215ENST00000569252 RAB7BQ96AH8 199 aa16.15■□□□□ 0.18
USB1-215ENST00000569252 HDAC8Q9BY41 377 aa16.15■□□□□ 0.18
USB1-215ENST00000569252 SLC6A17Q9H1V8 727 aa16.15■□□□□ 0.18
USB1-215ENST00000569252 ASIC3Q9UHC3 531 aa16.15■□□□□ 0.18
USB1-215ENST00000569252 PHTF1Q9UMS5 762 aa16.15■□□□□ 0.18
USB1-215ENST00000569252 INVSQ9Y283 1065 aa16.15■□□□□ 0.18
USB1-215ENST00000569252 ZZEF1O43149 2961 aa16.15■□□□□ 0.18
USB1-215ENST00000569252 SPEGQ15772 3267 aa16.14■□□□□ 0.18
USB1-215ENST00000569252 WDFY3Q8IZQ1 3526 aa16.14■□□□□ 0.17
USB1-215ENST00000569252 MYO18AQ92614 2054 aaKnown RBP16.14■□□□□ 0.17
USB1-215ENST00000569252 ERI2A8K979 691 aaKnown RBP16.14■□□□□ 0.17
USB1-215ENST00000569252 NDC80O14777 642 aa16.14■□□□□ 0.17
USB1-215ENST00000569252 GIPC1O14908 333 aa16.14■□□□□ 0.17
USB1-215ENST00000569252 NDUFS2O75306 463 aa16.14■□□□□ 0.17
USB1-215ENST00000569252 GJB3O75712 270 aa16.14■□□□□ 0.17
USB1-215ENST00000569252 TOP3BO95985 862 aaKnown RBP16.14■□□□□ 0.17
USB1-215ENST00000569252 MT-CYBP00156 380 aaPredicted RBP16.14■□□□□ 0.17
USB1-215ENST00000569252 CPP00450 1065 aa16.14■□□□□ 0.17
USB1-215ENST00000569252 PMLP29590 882 aa16.14■□□□□ 0.17
USB1-215ENST00000569252 VPS41P49754 854 aa16.14■□□□□ 0.17
USB1-215ENST00000569252 TPMTP51580 245 aa16.14■□□□□ 0.17
USB1-215ENST00000569252 RPL26P61254 145 aaKnown RBP16.14■□□□□ 0.17
USB1-215ENST00000569252 LINC00523Q86TU6 105 aa16.14■□□□□ 0.17
USB1-215ENST00000569252 PRPF39Q86UA1 669 aaKnown RBP16.14■□□□□ 0.17
USB1-215ENST00000569252 RASSF3Q86WH2 238 aa16.14■□□□□ 0.17
USB1-215ENST00000569252 IPMKQ8NFU5 416 aa16.14■□□□□ 0.17
USB1-215ENST00000569252 OR14C36Q8NHC7 312 aa16.14■□□□□ 0.17
USB1-215ENST00000569252 SLCO2A1Q92959 643 aa16.14■□□□□ 0.17
USB1-215ENST00000569252 ZNF419Q96HQ0 510 aaPredicted RBP16.14■□□□□ 0.17
USB1-215ENST00000569252 TPSD1Q9BZJ3 242 aa16.14■□□□□ 0.17
USB1-215ENST00000569252 BTBD1Q9H0C5 482 aa16.14■□□□□ 0.17
USB1-215ENST00000569252 LRRC40Q9H9A6 602 aa16.14■□□□□ 0.17
USB1-215ENST00000569252 ETNK1Q9HBU6 452 aa16.14■□□□□ 0.17
USB1-215ENST00000569252 SGK2Q9HBY8 427 aa16.14■□□□□ 0.17
USB1-215ENST00000569252 CD248Q9HCU0 757 aa16.14■□□□□ 0.17
USB1-215ENST00000569252 FZD4Q9ULV1 537 aa16.14■□□□□ 0.17
USB1-215ENST00000569252 RPL26L1Q9UNX3 145 aaKnown RBP16.14■□□□□ 0.17
USB1-215ENST00000569252 CHKBQ9Y259 395 aa16.14■□□□□ 0.17
USB1-215ENST00000569252 UTP11Q9Y3A2 253 aaKnown RBP16.14■□□□□ 0.17
USB1-215ENST00000569252 AKAP13Q12802 2813 aa16.14■□□□□ 0.17
USB1-215ENST00000569252 FAM187AA6NFU0 413 aa16.13■□□□□ 0.17
USB1-215ENST00000569252 LRRC72A6NJI9 287 aa16.13■□□□□ 0.17
USB1-215ENST00000569252 AP3B1O00203 1094 aa16.13■□□□□ 0.17
USB1-215ENST00000569252 TM4SF5O14894 197 aa16.13■□□□□ 0.17
USB1-215ENST00000569252 SLC7A4O43246 635 aa16.13■□□□□ 0.17
USB1-215ENST00000569252 HTRA2O43464 458 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms