RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 ATL2Q8NHH9 583 aa13.78□□□□□ -0.2
CNOT1-215ENST00000569020 WDR36Q8NI36 951 aaKnown RBP13.78□□□□□ -0.2
CNOT1-215ENST00000569020 SLC46A1Q96NT5 459 aa13.78□□□□□ -0.2
CNOT1-215ENST00000569020 GBP4Q96PP9 640 aa13.78□□□□□ -0.2
CNOT1-215ENST00000569020 TUBGCP5Q96RT8 1024 aa13.78□□□□□ -0.2
CNOT1-215ENST00000569020 APOOQ9BUR5 198 aa13.78□□□□□ -0.2
CNOT1-215ENST00000569020 EDEM3Q9BZQ6 932 aa13.78□□□□□ -0.2
CNOT1-215ENST00000569020 GULP1Q9UBP9 304 aa13.78□□□□□ -0.2
CNOT1-215ENST00000569020 KIF26BQ2KJY2 2108 aa13.78□□□□□ -0.2
CNOT1-215ENST00000569020 CAPN8A6NHC0 703 aa13.77□□□□□ -0.21
CNOT1-215ENST00000569020 ARHGAP42A6NI28 874 aa13.77□□□□□ -0.21
CNOT1-215ENST00000569020 LRRC10BA6NIK2 292 aa13.77□□□□□ -0.21
CNOT1-215ENST00000569020 EIF3CLB5ME19 914 aaKnown RBP13.77□□□□□ -0.21
CNOT1-215ENST00000569020 TNFAIP3P21580 790 aa13.77□□□□□ -0.21
CNOT1-215ENST00000569020 MLLT3P42568 568 aaPredicted RBP13.77□□□□□ -0.21
CNOT1-215ENST00000569020 FASNP49327 2511 aaKnown RBP13.77□□□□□ -0.21
CNOT1-215ENST00000569020 NFATC4Q14934 902 aa13.77□□□□□ -0.21
CNOT1-215ENST00000569020 AGERQ15109 404 aa13.77□□□□□ -0.21
CNOT1-215ENST00000569020 STX1AQ16623 288 aa13.77□□□□□ -0.21
CNOT1-215ENST00000569020 WSCD2Q2TBF2 565 aa13.77□□□□□ -0.21
CNOT1-215ENST00000569020 GKN2Q86XP6 184 aa13.77□□□□□ -0.21
CNOT1-215ENST00000569020 PAF1Q8N7H5 531 aa13.77□□□□□ -0.21
CNOT1-215ENST00000569020 TSACCQ96A04 125 aaPredicted RBP13.77□□□□□ -0.21
CNOT1-215ENST00000569020 CELF6Q96J87 481 aaKnown RBP13.77□□□□□ -0.21
CNOT1-215ENST00000569020 EIF3CQ99613 913 aaKnown RBP13.77□□□□□ -0.21
CNOT1-215ENST00000569020 LRRC19Q9H756 370 aa13.77□□□□□ -0.21
CNOT1-215ENST00000569020 PDFQ9HBH1 243 aa13.77□□□□□ -0.21
CNOT1-215ENST00000569020 CPNE5Q9HCH3 593 aa13.77□□□□□ -0.21
CNOT1-215ENST00000569020 PCDH12Q9NPG4 1184 aa13.77□□□□□ -0.21
CNOT1-215ENST00000569020 SIRPGQ9P1W8 387 aa13.77□□□□□ -0.21
CNOT1-215ENST00000569020 KLQ9UEF7 1012 aa13.77□□□□□ -0.21
CNOT1-215ENST00000569020 PTPRQQ9UMZ3 2332 aa13.77□□□□□ -0.21
CNOT1-215ENST00000569020 AP4E1Q9UPM8 1137 aa13.77□□□□□ -0.21
CNOT1-215ENST00000569020 CCDC187A0A096LP49 1063 aa13.76□□□□□ -0.21
CNOT1-215ENST00000569020 J3KR12 359 aa13.76□□□□□ -0.21
CNOT1-215ENST00000569020 EEF2KO00418 725 aaKnown RBP13.76□□□□□ -0.21
CNOT1-215ENST00000569020 DAPK3O43293 454 aa13.76□□□□□ -0.21
CNOT1-215ENST00000569020 PRAMEF11O60813 436 aa13.76□□□□□ -0.21
CNOT1-215ENST00000569020 PALMO75781 387 aa13.76□□□□□ -0.21
CNOT1-215ENST00000569020 TNFP01375 233 aa13.76□□□□□ -0.21
CNOT1-215ENST00000569020 PCCBP05166 539 aa13.76□□□□□ -0.21
CNOT1-215ENST00000569020 CELA2BP08218 269 aaPredicted RBP13.76□□□□□ -0.21
CNOT1-215ENST00000569020 PSMA2P25787 234 aa13.76□□□□□ -0.21
CNOT1-215ENST00000569020 SERPINA4P29622 427 aa13.76□□□□□ -0.21
CNOT1-215ENST00000569020 CSNK1DP48730 415 aa13.76□□□□□ -0.21
CNOT1-215ENST00000569020 LIG3P49916 1009 aa13.76□□□□□ -0.21
CNOT1-215ENST00000569020 SRP54P61011 504 aaKnown RBP13.76□□□□□ -0.21
CNOT1-215ENST00000569020 OGDHQ02218 1023 aa13.76□□□□□ -0.21
CNOT1-215ENST00000569020 CFHR1Q03591 330 aa13.76□□□□□ -0.21
CNOT1-215ENST00000569020 VAC14Q08AM6 782 aa13.76□□□□□ -0.21
CNOT1-215ENST00000569020 MTM1Q13496 603 aa13.76□□□□□ -0.21
CNOT1-215ENST00000569020 INPP5AQ14642 412 aa13.76□□□□□ -0.21
CNOT1-215ENST00000569020 ALG11Q2TAA5 492 aa13.76□□□□□ -0.21
CNOT1-215ENST00000569020 ERMARDQ5T6L9 678 aa13.76□□□□□ -0.21
CNOT1-215ENST00000569020 ZNF605Q86T29 641 aa13.76□□□□□ -0.21
CNOT1-215ENST00000569020 CAMK1DQ8IU85 385 aa13.76□□□□□ -0.21
CNOT1-215ENST00000569020 PCDH19Q8TAB3 1148 aa13.76□□□□□ -0.21
CNOT1-215ENST00000569020 PRR11Q96HE9 360 aaPredicted RBP13.76□□□□□ -0.21
CNOT1-215ENST00000569020 CINPQ9BW66 212 aaPredicted RBP13.76□□□□□ -0.21
CNOT1-215ENST00000569020 SLC39A8Q9C0K1 460 aa13.76□□□□□ -0.21
CNOT1-215ENST00000569020 DHX35Q9H5Z1 703 aaKnown RBP13.76□□□□□ -0.21
CNOT1-215ENST00000569020 ATP13A3Q9H7F0 1226 aa13.76□□□□□ -0.21
CNOT1-215ENST00000569020 SP110Q9HB58 689 aa13.76□□□□□ -0.21
CNOT1-215ENST00000569020 PARVAQ9NVD7 372 aa13.76□□□□□ -0.21
CNOT1-215ENST00000569020 GPATCH2LQ9NWQ4 482 aa13.76□□□□□ -0.21
CNOT1-215ENST00000569020 ATP8A1Q9Y2Q0 1164 aa13.76□□□□□ -0.21
CNOT1-215ENST00000569020 OR1A2Q9Y585 309 aa13.76□□□□□ -0.21
CNOT1-215ENST00000569020 BPTFQ12830 3046 aa13.75□□□□□ -0.21
CNOT1-215ENST00000569020 A0A1W2PNU3 283 aaPredicted RBP13.75□□□□□ -0.21
CNOT1-215ENST00000569020 CFAP69A5D8W1 941 aa13.75□□□□□ -0.21
CNOT1-215ENST00000569020 CDRT15L2A8MXV6 281 aa13.75□□□□□ -0.21
CNOT1-215ENST00000569020 NTN3O00634 580 aaPredicted RBP13.75□□□□□ -0.21
CNOT1-215ENST00000569020 BUB1BO60566 1050 aaPredicted RBP13.75□□□□□ -0.21
CNOT1-215ENST00000569020 RNF8O76064 485 aa13.75□□□□□ -0.21
CNOT1-215ENST00000569020 TNFSF15O95150 251 aa13.75□□□□□ -0.21
CNOT1-215ENST00000569020 MMP12P39900 470 aa13.75□□□□□ -0.21
CNOT1-215ENST00000569020 PAPOLAP51003 745 aaKnown RBP13.75□□□□□ -0.21
CNOT1-215ENST00000569020 POLR2LP62875 67 aaKnown RBP13.75□□□□□ -0.21
CNOT1-215ENST00000569020 PCSK4Q6UW60 755 aa13.75□□□□□ -0.21
CNOT1-215ENST00000569020 SRLQ86TD4 932 aa13.75□□□□□ -0.21
CNOT1-215ENST00000569020 ZNF843Q8N446 348 aa13.75□□□□□ -0.21
CNOT1-215ENST00000569020 OR6C4Q8NGE1 309 aa13.75□□□□□ -0.21
CNOT1-215ENST00000569020 CCDC74AQ96AQ1 378 aa13.75□□□□□ -0.21
CNOT1-215ENST00000569020 WBP1Q96G27 269 aa13.75□□□□□ -0.21
CNOT1-215ENST00000569020 LIN37Q96GY3 246 aaPredicted RBP13.75□□□□□ -0.21
CNOT1-215ENST00000569020 WDR92Q96MX6 357 aa13.75□□□□□ -0.21
CNOT1-215ENST00000569020 GFM1Q96RP9 751 aaKnown RBP13.75□□□□□ -0.21
CNOT1-215ENST00000569020 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.75□□□□□ -0.21
CNOT1-215ENST00000569020 GPR34Q9UPC5 381 aa13.75□□□□□ -0.21
CNOT1-215ENST00000569020 SMG1Q96Q15 3661 aaKnown RBP13.74□□□□□ -0.21
CNOT1-215ENST00000569020 TMCO5BA8MYB1 307 aa13.74□□□□□ -0.21
CNOT1-215ENST00000569020 TMX2-CTNND1H3BSU7 103 aa13.74□□□□□ -0.21
CNOT1-215ENST00000569020 CACNB4O00305 520 aaPredicted RBP13.74□□□□□ -0.21
CNOT1-215ENST00000569020 PRKCGP05129 697 aa13.74□□□□□ -0.21
CNOT1-215ENST00000569020 ITGA2BP08514 1039 aa13.74□□□□□ -0.21
CNOT1-215ENST00000569020 KELP23276 732 aa13.74□□□□□ -0.21
CNOT1-215ENST00000569020 RGRP47804 291 aa13.74□□□□□ -0.21
CNOT1-215ENST00000569020 PDX1P52945 283 aa13.74□□□□□ -0.21
CNOT1-215ENST00000569020 SKOR1P84550 965 aa13.74□□□□□ -0.21
CNOT1-215ENST00000569020 BCL2L1Q07817 233 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms