RNA–Protein interactions for RNA: ENST00000568673.5

TCF4-240, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-240ENST00000568673 ATXN1LP0C7T5 689 aaKnown RBP9.71□□□□□ -0.86
TCF4-240ENST00000568673 CCDC166P0CW27 439 aa9.71□□□□□ -0.86
TCF4-240ENST00000568673 OR1E1P30953 314 aa9.71□□□□□ -0.86
TCF4-240ENST00000568673 SLC26A3P40879 764 aa9.71□□□□□ -0.86
TCF4-240ENST00000568673 PFKPQ01813 784 aa9.71□□□□□ -0.86
TCF4-240ENST00000568673 SP3Q02447 781 aa9.71□□□□□ -0.86
TCF4-240ENST00000568673 MTA1Q13330 715 aa9.71□□□□□ -0.86
TCF4-240ENST00000568673 PDCD2Q16342 344 aaPredicted RBP9.71□□□□□ -0.86
TCF4-240ENST00000568673 MGAT5BQ3V5L5 792 aa9.71□□□□□ -0.86
TCF4-240ENST00000568673 SH2D4BQ5SQS7 431 aa9.71□□□□□ -0.86
TCF4-240ENST00000568673 HECTD2Q5U5R9 776 aa9.71□□□□□ -0.86
TCF4-240ENST00000568673 NXNQ6DKJ4 435 aa9.71□□□□□ -0.86
TCF4-240ENST00000568673 KLC3Q6P597 504 aa9.71□□□□□ -0.86
TCF4-240ENST00000568673 C16orf89Q6UX73 402 aa9.71□□□□□ -0.86
TCF4-240ENST00000568673 SNX32Q86XE0 403 aa9.71□□□□□ -0.86
TCF4-240ENST00000568673 ABI1Q8IZP0 508 aa9.71□□□□□ -0.86
TCF4-240ENST00000568673 SLC43A3Q8NBI5 491 aa9.71□□□□□ -0.86
TCF4-240ENST00000568673 CCDC124Q96CT7 223 aaKnown RBP9.71□□□□□ -0.86
TCF4-240ENST00000568673 B3GALT6Q96L58 329 aa9.71□□□□□ -0.86
TCF4-240ENST00000568673 POLR1EQ9GZS1 481 aaKnown RBP9.71□□□□□ -0.86
TCF4-240ENST00000568673 ELAC1Q9H777 363 aaKnown RBP9.71□□□□□ -0.86
TCF4-240ENST00000568673 COMMD8Q9NX08 183 aa9.71□□□□□ -0.86
TCF4-240ENST00000568673 PRPF19Q9UMS4 504 aaKnown RBP9.71□□□□□ -0.86
TCF4-240ENST00000568673 MTMR11A4FU01 709 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 NEMP2A6NFY4 417 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 LDB2O43679 373 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 BUD23O43709 281 aaKnown RBP9.7□□□□□ -0.86
TCF4-240ENST00000568673 EPOP01588 193 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 HMBSP08397 361 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 ETFBP38117 255 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 MAPKAPK2P49137 400 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 NUDT2P50583 147 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 ARSDP51689 593 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 KPNA1P52294 538 aaPredicted RBP9.7□□□□□ -0.86
TCF4-240ENST00000568673 PRAMEP78395 509 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 ACVR1Q04771 509 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 GALNT1Q10472 559 aaPredicted RBP9.7□□□□□ -0.86
TCF4-240ENST00000568673 SMARCB1Q12824 385 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 ILF2Q12905 390 aaKnown RBP9.7□□□□□ -0.86
TCF4-240ENST00000568673 HERC3Q15034 1050 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 TCHHL1Q5QJ38 904 aaPredicted RBP9.7□□□□□ -0.86
TCF4-240ENST00000568673 PPM1LQ5SGD2 360 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 TMEM198Q66K66 360 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 RSPO2Q6UXX9 243 aaPredicted RBP9.7□□□□□ -0.86
TCF4-240ENST00000568673 DHDDSQ86SQ9 333 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 RNF135Q8IUD6 432 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 DSELQ8IZU8 1212 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 CEP70Q8NHQ1 597 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 PEX13Q92968 403 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 SEPT5Q99719 369 aaPredicted RBP9.7□□□□□ -0.86
TCF4-240ENST00000568673 SEMA3CQ99985 751 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 TSEN34Q9BSV6 310 aaKnown RBP9.7□□□□□ -0.86
TCF4-240ENST00000568673 CRISPLD1Q9H336 500 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 EML4Q9HC35 981 aaKnown RBP9.7□□□□□ -0.86
TCF4-240ENST00000568673 ZBTB26Q9HCK0 441 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 STK39Q9UEW8 545 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 THSD7BQ9C0I4 1608 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 EIF4E1BA6NMX2 242 aaKnown RBP9.7□□□□□ -0.86
TCF4-240ENST00000568673 A8MT66 165 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 TMEM233B4DJY2 109 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 ENPP3O14638 875 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 TBC1D4O60343 1298 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 TLR5O60602 858 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 PRAMEF11O60813 436 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 ZDHHC11BP0C7U3 371 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 HNRNPLP14866 589 aaKnown RBP eCLIP9.7□□□□□ -0.862e-6■■■■□ 21.9
TCF4-240ENST00000568673 KCNA5P22460 613 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 ACVRL1P37023 503 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 SATB1Q01826 763 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 DSG1Q02413 1049 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 LAMB3Q13751 1172 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 CAPRIN2Q6IMN6 1127 aaKnown RBP9.7□□□□□ -0.86
TCF4-240ENST00000568673 IZUMO2Q6UXV1 221 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 RNF19BQ6ZMZ0 732 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 RNF111Q6ZNA4 994 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 KBTBD6Q86V97 674 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 CIR1Q86X95 450 aaPredicted RBP9.7□□□□□ -0.86
TCF4-240ENST00000568673 SLC22A9Q8IVM8 553 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 PNPLA1Q8N8W4 532 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 ANKRD49Q8WVL7 239 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 IFT43Q96FT9 208 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 FAR2Q96K12 515 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 CATSPER2Q96P56 530 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 SERPINI1Q99574 410 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 CCSER2Q9H7U1 834 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 VPS28Q9UK41 221 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 G3BP2Q9UN86 482 aaKnown RBP9.7□□□□□ -0.86
TCF4-240ENST00000568673 PCDHB7Q9Y5E2 793 aa9.7□□□□□ -0.86
TCF4-240ENST00000568673 SDHDO14521 159 aa9.69□□□□□ -0.86
TCF4-240ENST00000568673 WISP3O95389 354 aaPredicted RBP9.69□□□□□ -0.86
TCF4-240ENST00000568673 VNN2O95498 520 aa9.69□□□□□ -0.86
TCF4-240ENST00000568673 PENKP01210 267 aaPredicted RBP9.69□□□□□ -0.86
TCF4-240ENST00000568673 HLA-DPA1P20036 260 aa9.69□□□□□ -0.86
TCF4-240ENST00000568673 SULT2A1Q06520 285 aa9.69□□□□□ -0.86
TCF4-240ENST00000568673 DUSP4Q13115 394 aa9.69□□□□□ -0.86
TCF4-240ENST00000568673 NADSYN1Q6IA69 706 aa9.69□□□□□ -0.86
TCF4-240ENST00000568673 LRRC8DQ7L1W4 858 aa9.69□□□□□ -0.86
TCF4-240ENST00000568673 LDB1Q86U70 411 aaPredicted RBP9.69□□□□□ -0.86
TCF4-240ENST00000568673 EFCAB3Q8N7B9 438 aa9.69□□□□□ -0.86
TCF4-240ENST00000568673 UCMAQ8WVF2 138 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms