RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	HSPA9	P38646	679 aa	Known RBP	6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	RGR	P47804	291 aa		6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	ACADVL	P49748	655 aa		6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	LIG3	P49916	1009 aa		6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	THOP1	P52888	689 aa		6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	CDH6	P55285	790 aa		6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	AP1S1	P61966	158 aa		6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	E2F1	Q01094	437 aa		6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	SLC25A11	Q02978	314 aa	Known RBP	6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	SLC10A7	Q0GE19	358 aa		6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	EIF2B5	Q13144	721 aa	Known RBP	6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	LRRC14	Q15048	493 aa		6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	PDK2	Q15119	407 aa		6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	ASTE1	Q2TB18	679 aa	Predicted RBP	6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	WSCD2	Q2TBF2	565 aa		6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	PROX2	Q3B8N5	592 aa		6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	ATP13A4	Q4VNC1	1196 aa		6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	FAXC	Q5TGI0	409 aa		6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	PARG	Q86W56	976 aa		6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	MARCH9	Q86YJ5	346 aa		6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	VSTM4	Q8IW00	320 aa		6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	MAP7D3	Q8IWC1	876 aa		6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	BBS5	Q8N3I7	341 aa		6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	EFCAB3	Q8N7B9	438 aa		6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	PDCD7	Q8N8D1	485 aa	Known RBP	6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	ZNF564	Q8TBZ8	553 aa	Predicted RBP	6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	FAM71B	Q8TC56	605 aa		6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	NSMCE1	Q8WV22	266 aa		6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	BTN2A2	Q8WVV5	523 aa		6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	PSKH2	Q96QS6	385 aa		6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	DEF6	Q9H4E7	631 aa		6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	CCDC86	Q9H6F5	360 aa	Known RBP	6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	MBNL1	Q9NR56	388 aa	Known RBP	6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	NLGN3	Q9NZ94	848 aa		6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	RCOR3	Q9P2K3	495 aa	Predicted RBP	6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	UVRAG	Q9P2Y5	699 aa		6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	LCMT1	Q9UIC8	334 aa		6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	KLF15	Q9UIH9	416 aa		6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	NENF	Q9UMX5	172 aa		6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	ATP8A1	Q9Y2Q0	1164 aa		6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	COQ6	Q9Y2Z9	468 aa		6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	CSNK1G3	Q9Y6M4	447 aa		6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635	DMXL2	Q8TDJ6	3036 aa		6.97	□□□□□ -1.29
SF3B3-209	ENST00000567635		A0A1W2PQ67	120 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	TTC24	A2A3L6	582 aa	Predicted RBP	6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	CFAP69	A5D8W1	941 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	FAM149A	A5PLN7	773 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	GOLGA6L3	A6NEY3	463 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635		K7ESM1	405 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	TAF4	O00268	1085 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	TRAFD1	O14545	582 aa	Predicted RBP	6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	MUSK	O15146	869 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	AQP9	O43315	295 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	LZTS3	O60299	673 aa	Predicted RBP	6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	NEBL	O76041	1014 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	PROSC	O94903	275 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	PEX11B	O96011	259 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	PRKCG	P05129	697 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	KRT7	P08729	469 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	TMEM253	P0C7T8	217 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	GIMD1	P0DJR0	217 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	CKMT1A	P12532	417 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	C6	P13671	934 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	SERPINB6	P35237	376 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	IGFALS	P35858	605 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	MMP12	P39900	470 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	PEX5	P50542	639 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	DUSP3	P51452	185 aa	Predicted RBP	6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	ARSE	P51690	589 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	ADK	P55263	362 aa	Known RBP	6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	DAB2	P98082	770 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	SEMG2	Q02383	582 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	PPARD	Q03181	441 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	MMRN1	Q13201	1228 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	CAMK2B	Q13554	666 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	DPYSL3	Q14195	570 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	ZNF235	Q14590	738 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	INPP5A	Q14642	412 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	AGER	Q15109	404 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	IRF4	Q15306	451 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	ANKRD20A8P	Q5CZ79	823 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	RALGPS1	Q5JS13	557 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	TPRG1L	Q5T0D9	272 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	MARC1	Q5VT66	337 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	LIPI	Q6XZB0	460 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	KDM7A	Q6ZMT4	941 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	ZSWIM9	Q86XI8	627 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	CACTIN-AS1	Q8N1I8	211 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	FAM181A	Q8N9Y4	354 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	TP53I13	Q8NBR0	393 aa	Predicted RBP	6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	RNF214	Q8ND24	703 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	ZNF548	Q8NEK5	533 aa	Predicted RBP	6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	SLC35G2	Q8TBE7	412 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	ECHDC3	Q96DC8	303 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	APOLD1	Q96LR9	279 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	CCDC42	Q96M95	316 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	NSMCE3	Q96MG7	304 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	NUDCD1	Q96RS6	583 aa		6.96	□□□□□ -1.3
SF3B3-209	ENST00000567635	CHP1	Q99653	195 aa		6.96	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms