RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 ATXN2Q99700 1313 aaKnown RBP11.3□□□□□ -0.6
RPAP1-204ENST00000562303 MYO3AQ8NEV4 1616 aa11.3□□□□□ -0.6
RPAP1-204ENST00000562303 GRM6O15303 877 aa11.3□□□□□ -0.6
RPAP1-204ENST00000562303 ATP6V1G2O95670 118 aa11.3□□□□□ -0.6
RPAP1-204ENST00000562303 GIMD1P0DJR0 217 aa11.3□□□□□ -0.6
RPAP1-204ENST00000562303 TSPAN8P19075 237 aa11.3□□□□□ -0.6
RPAP1-204ENST00000562303 NAA20P61599 178 aa11.3□□□□□ -0.6
RPAP1-204ENST00000562303 SPIBQ01892 262 aa11.3□□□□□ -0.6
RPAP1-204ENST00000562303 TAPT1Q6NXT6 567 aa11.3□□□□□ -0.6
RPAP1-204ENST00000562303 MZT2BQ6NZ67 158 aa11.3□□□□□ -0.6
RPAP1-204ENST00000562303 BPIFB6Q8NFQ5 453 aa11.3□□□□□ -0.6
RPAP1-204ENST00000562303 OR4A15Q8NGL6 344 aa11.3□□□□□ -0.6
RPAP1-204ENST00000562303 TEX47Q8TBZ9 253 aa11.3□□□□□ -0.6
RPAP1-204ENST00000562303 C5orf34Q96MH7 638 aa11.3□□□□□ -0.6
RPAP1-204ENST00000562303 KCNS3Q9BQ31 491 aa11.3□□□□□ -0.6
RPAP1-204ENST00000562303 CRISPLD1Q9H336 500 aa11.3□□□□□ -0.6
RPAP1-204ENST00000562303 UBE2QL1A1L167 161 aa11.3□□□□□ -0.6
RPAP1-204ENST00000562303 CLDN5O00501 218 aa11.3□□□□□ -0.6
RPAP1-204ENST00000562303 KHDRBS3O75525 346 aaKnown RBP11.3□□□□□ -0.6
RPAP1-204ENST00000562303 LRATO95237 230 aa11.3□□□□□ -0.6
RPAP1-204ENST00000562303 CLUP10909 449 aa11.3□□□□□ -0.6
RPAP1-204ENST00000562303 MC4RP32245 332 aa11.3□□□□□ -0.6
RPAP1-204ENST00000562303 IFI35P80217 286 aaPredicted RBP11.3□□□□□ -0.6
RPAP1-204ENST00000562303 MRPS22P82650 360 aaKnown RBP11.3□□□□□ -0.6
RPAP1-204ENST00000562303 TOP3AQ13472 1001 aaPredicted RBP11.3□□□□□ -0.6
RPAP1-204ENST00000562303 NR1D2Q14995 579 aa11.3□□□□□ -0.6
RPAP1-204ENST00000562303 VSIG10LQ86VR7 867 aa11.3□□□□□ -0.6
RPAP1-204ENST00000562303 BEND7Q8N7W2 519 aaPredicted RBP11.3□□□□□ -0.6
RPAP1-204ENST00000562303 OR6K2Q8NGY2 324 aa11.3□□□□□ -0.6
RPAP1-204ENST00000562303 DNAJB14Q8TBM8 379 aa11.3□□□□□ -0.6
RPAP1-204ENST00000562303 METTL21AQ8WXB1 218 aa11.3□□□□□ -0.6
RPAP1-204ENST00000562303 TRAPPC9Q96Q05 1148 aa11.3□□□□□ -0.6
RPAP1-204ENST00000562303 ZNF607Q96SK3 696 aa11.3□□□□□ -0.6
RPAP1-204ENST00000562303 ACO2Q99798 780 aaKnown RBP11.3□□□□□ -0.6
RPAP1-204ENST00000562303 PHF11Q9UIL8 331 aa11.3□□□□□ -0.6
RPAP1-204ENST00000562303 GMPPBQ9Y5P6 360 aa11.3□□□□□ -0.6
RPAP1-204ENST00000562303 OR6C75A6NL08 312 aa11.3□□□□□ -0.6
RPAP1-204ENST00000562303 MFN2O95140 757 aa11.3□□□□□ -0.6
RPAP1-204ENST00000562303 CPSF6Q16630 551 aaKnown RBP eCLIP11.3□□□□□ -0.6
RPAP1-204ENST00000562303 CHSY3Q70JA7 882 aa11.3□□□□□ -0.6
RPAP1-204ENST00000562303 HIPK1Q86Z02 1210 aa11.3□□□□□ -0.6
RPAP1-204ENST00000562303 MPP4Q96JB8 637 aa11.3□□□□□ -0.6
RPAP1-204ENST00000562303 COQ7Q99807 217 aa11.3□□□□□ -0.6
RPAP1-204ENST00000562303 TTPALQ9BTX7 342 aa11.3□□□□□ -0.6
RPAP1-204ENST00000562303 C3orf14Q9HBI5 128 aa11.3□□□□□ -0.6
RPAP1-204ENST00000562303 PRDM8Q9NQV8 689 aa11.3□□□□□ -0.6
RPAP1-204ENST00000562303 PHPT1Q9NRX4 125 aaPredicted RBP11.3□□□□□ -0.6
RPAP1-204ENST00000562303 TBC1D30Q9Y2I9 924 aa11.3□□□□□ -0.6
RPAP1-204ENST00000562303 MTF2Q9Y483 593 aaPredicted RBP11.3□□□□□ -0.6
RPAP1-204ENST00000562303 TCRBV5S4A2TA0A5A2 114 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 CCL16O15467 120 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 LYNP07948 512 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 HGFP14210 728 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 CES1P23141 567 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 WASP42768 502 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 GLUD2P49448 558 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 SUZ12Q15022 739 aaKnown RBP11.29□□□□□ -0.6
RPAP1-204ENST00000562303 LEMD2Q8NC56 503 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 LINGO1Q96FE5 620 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 ZFRQ96KR1 1074 aaKnown RBP11.29□□□□□ -0.6
RPAP1-204ENST00000562303 PANX1Q96RD7 426 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 MMADHCQ9H3L0 296 aaPredicted RBP11.29□□□□□ -0.6
RPAP1-204ENST00000562303 DDX20Q9UHI6 824 aaKnown RBP11.29□□□□□ -0.6
RPAP1-204ENST00000562303 PRKAB1Q9Y478 270 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 PTCH2Q9Y6C5 1203 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 INO80Q9ULG1 1556 aaPredicted RBP11.29□□□□□ -0.6
RPAP1-204ENST00000562303 MAGEB3O15480 346 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 GMFGO60234 142 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 SNRPB2P08579 225 aaKnown RBP11.29□□□□□ -0.6
RPAP1-204ENST00000562303 GRIA4P48058 902 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 PSMD8P48556 350 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 TAS2R41P59536 307 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 RAB10P61026 200 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 EPS8Q12929 822 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 NTRK3Q16288 839 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 ANXA8L1Q5VT79 327 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 TRIM40Q6P9F5 258 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 POMZP3Q6PJE2 187 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 TXNDC11Q6PKC3 985 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 PLPPR4Q7Z2D5 763 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 GPR180Q86V85 440 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 RBFAQ8N0V3 343 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 AADATQ8N5Z0 425 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 KCTD4Q8WVF5 259 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 PPCDCQ96CD2 204 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 MYO19Q96H55 970 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 QKIQ96PU8 341 aaKnown RBP eCLIP11.29□□□□□ -0.6
RPAP1-204ENST00000562303 KCNK4Q9NYG8 393 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 FAM92AA1XBS5 289 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.29□□□□□ -0.6
RPAP1-204ENST00000562303 GOT1P17174 413 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 LAG3P18627 525 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 ALAS2P22557 587 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 MYL9P24844 172 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 TNFSF9P41273 254 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 SSR2P43308 183 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 CDK18Q07002 472 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 ACAP2Q15057 778 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 NRF1Q16656 503 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 TNS2Q63HR2 1409 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms