RNA–Protein interactions for RNA: ENST00000562038.1

LINC01963-201, Transcript of long intergenic non-protein coding RNA 1963, humanhuman

BASIC

Gene LINC01963, Length 3,148 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01963-201ENST00000562038 DTLQ9NZJ0 730 aa5.69□□□□□ -1.5
LINC01963-201ENST00000562038 PCYOX1Q9UHG3 505 aa5.69□□□□□ -1.5
LINC01963-201ENST00000562038 XPO7Q9UIA9 1087 aaKnown RBP5.69□□□□□ -1.5
LINC01963-201ENST00000562038 PCDHGB3Q9Y5G1 929 aa5.69□□□□□ -1.5
LINC01963-201ENST00000562038 LRRK1Q38SD2 2015 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 LOC285095A0A1B0GVY8 99 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 TBC1D3BA6NDS4 549 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 LRRC72A6NJI9 287 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 SYNCRIPO60506 623 aaKnown RBP5.68□□□□□ -1.5
LINC01963-201ENST00000562038 PALMO75781 387 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 ANXA9O76027 345 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 CNTN5O94779 1100 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 HLA-DPA1P20036 260 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 CHRNA3P32297 505 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 PAPOLAP51003 745 aaKnown RBP5.68□□□□□ -1.5
LINC01963-201ENST00000562038 IFRD2Q12894 506 aaPredicted RBP5.68□□□□□ -1.5
LINC01963-201ENST00000562038 RPS6KA1Q15418 735 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 SIX1Q15475 284 aaPredicted RBP5.68□□□□□ -1.5
LINC01963-201ENST00000562038 CST6Q15828 149 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 CA9Q16790 459 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 C2orf27AQ580R0 203 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 DBX2Q6ZNG2 339 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 PRR23CQ6ZRP0 262 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 NLRP9Q7RTR0 991 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 HOOK3Q86VS8 718 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 SLC13A5Q86YT5 568 aaPredicted RBP5.68□□□□□ -1.5
LINC01963-201ENST00000562038 NPWQ8N729 165 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 RPLP0P6Q8NHW5 317 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 TFB1MQ8WVM0 346 aaKnown RBP5.68□□□□□ -1.5
LINC01963-201ENST00000562038 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.68□□□□□ -1.5
LINC01963-201ENST00000562038 PRCCQ92733 491 aaPredicted RBP5.68□□□□□ -1.5
LINC01963-201ENST00000562038 HMCESQ96FZ2 354 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 MRGPRX1Q96LB2 322 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 TEKT5Q96M29 485 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 BRINP2Q9C0B6 783 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 NCKIPSDQ9NZQ3 722 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 IPO11Q9UI26 975 aaKnown RBP5.68□□□□□ -1.5
LINC01963-201ENST00000562038 VPS28Q9UK41 221 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 AAR2Q9Y312 384 aaKnown RBP5.68□□□□□ -1.5
LINC01963-201ENST00000562038 METTL12A8MUP2 240 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 H7C0S8 307 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 TNFRSF10CO14798 259 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 GRAP2O75791 330 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 TMCC1O94876 653 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 IL33O95760 270 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 SERPINA4P29622 427 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 RXRGP48443 463 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 VAC14Q08AM6 782 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 BRD3Q15059 726 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 FNDC3BQ53EP0 1204 aaKnown RBP5.68□□□□□ -1.5
LINC01963-201ENST00000562038 FSCBQ5H9T9 825 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 PIP5KL1Q5T9C9 394 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 SH3PXD2AQ5TCZ1 1133 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 NAPEPLDQ6IQ20 393 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 LVRNQ6Q4G3 990 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 XKR5Q6UX68 686 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 LINC00523Q86TU6 105 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 MCUQ8NE86 351 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 VPS35Q96QK1 796 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 C1QTNF2Q9BXJ5 285 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 TLR10Q9BXR5 811 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 MAK16Q9BXY0 300 aaKnown RBP5.68□□□□□ -1.5
LINC01963-201ENST00000562038 MAGEE1Q9HCI5 957 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 SPATA6Q9NWH7 488 aaPredicted RBP5.68□□□□□ -1.5
LINC01963-201ENST00000562038 SALL4Q9UJQ4 1053 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 GMEB2Q9UKD1 530 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 SNX12Q9UMY4 172 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 NEU2Q9Y3R4 380 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 DNMT3AQ9Y6K1 912 aaPredicted RBP5.68□□□□□ -1.5
LINC01963-201ENST00000562038 CSNK1G3Q9Y6M4 447 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 VCANP13611 3396 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 SGK1O00141 431 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 SCAMP3O14828 347 aaKnown RBP5.68□□□□□ -1.5
LINC01963-201ENST00000562038 INSIG1O15503 277 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 ATMINO43313 823 aaPredicted RBP5.68□□□□□ -1.5
LINC01963-201ENST00000562038 MFSD11O43934 449 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 KCNK5O95279 499 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 FGF1P05230 155 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 CD27P26842 260 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 ADRA1AP35348 466 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 MMP13P45452 471 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 GEMP55040 296 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 RACK1P63244 317 aaKnown RBP5.68□□□□□ -1.5
LINC01963-201ENST00000562038 SKOR1P84550 965 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 ACVR1Q04771 509 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 ZNF211Q13398 564 aaPredicted RBP5.68□□□□□ -1.5
LINC01963-201ENST00000562038 SEMA5AQ13591 1074 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 DHX34Q14147 1143 aaKnown RBP5.68□□□□□ -1.5
LINC01963-201ENST00000562038 MESDQ14696 234 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 UBXN2BQ14CS0 331 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 PARP6Q2NL67 630 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 GRAMD1BQ3KR37 738 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 TEX44Q53QW1 395 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 AGBL4Q5VU57 503 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 KCTD11Q693B1 232 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 RFWD3Q6PCD5 774 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 GDPD4Q6W3E5 623 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 ERN2Q76MJ5 926 aaKnown RBP5.68□□□□□ -1.5
LINC01963-201ENST00000562038 APCDD1Q8J025 514 aa5.68□□□□□ -1.5
LINC01963-201ENST00000562038 AVL9Q8NBF6 648 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms