RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 EIF3CQ99613 913 aaKnown RBP25.51■■□□□ 1.67
NME3-202ENST00000561637 SEMA4CQ9C0C4 833 aa25.51■■□□□ 1.67
NME3-202ENST00000561637 SP110Q9HB58 689 aa25.51■■□□□ 1.67
NME3-202ENST00000561637 IPO11Q9UI26 975 aaKnown RBP25.51■■□□□ 1.67
NME3-202ENST00000561637 NENFQ9UMX5 172 aa25.51■■□□□ 1.67
NME3-202ENST00000561637 U3KQA8 63 aa25.51■■□□□ 1.67
NME3-202ENST00000561637 ANKRD36A6QL64 1941 aa25.5■■□□□ 1.67
NME3-202ENST00000561637 PYCARD-AS1I3L0S3 204 aa25.5■■□□□ 1.67
NME3-202ENST00000561637 ERVH48-1M5A8F1 160 aa25.5■■□□□ 1.67
NME3-202ENST00000561637 PALMO75781 387 aa25.5■■□□□ 1.67
NME3-202ENST00000561637 CYP1A2P05177 515 aa25.5■■□□□ 1.67
NME3-202ENST00000561637 NME1P15531 152 aaKnown RBP25.5■■□□□ 1.67
NME3-202ENST00000561637 RABIFP47224 123 aa25.5■■□□□ 1.67
NME3-202ENST00000561637 SLC25A11Q02978 314 aaKnown RBP25.5■■□□□ 1.67
NME3-202ENST00000561637 IRF4Q15306 451 aa25.5■■□□□ 1.67
NME3-202ENST00000561637 TMEM52BQ4KMG9 183 aa25.5■■□□□ 1.67
NME3-202ENST00000561637 TAF1BQ53T94 588 aaPredicted RBP25.5■■□□□ 1.67
NME3-202ENST00000561637 POLNQ7Z5Q5 900 aa25.5■■□□□ 1.67
NME3-202ENST00000561637 PARGQ86W56 976 aa25.5■■□□□ 1.67
NME3-202ENST00000561637 PSTKQ8IV42 348 aaKnown RBP25.5■■□□□ 1.67
NME3-202ENST00000561637 CACTIN-AS1Q8N1I8 211 aa25.5■■□□□ 1.67
NME3-202ENST00000561637 DENND6BQ8NEG7 585 aa25.5■■□□□ 1.67
NME3-202ENST00000561637 ZNF548Q8NEK5 533 aaPredicted RBP25.5■■□□□ 1.67
NME3-202ENST00000561637 CSPG4P5Q96PW8 444 aa25.5■■□□□ 1.67
NME3-202ENST00000561637 LGMNQ99538 433 aa25.5■■□□□ 1.67
NME3-202ENST00000561637 PCDH18Q9HCL0 1135 aa25.5■■□□□ 1.67
NME3-202ENST00000561637 ANAPC7Q9UJX3 599 aa25.5■■□□□ 1.67
NME3-202ENST00000561637 LUC7L2Q9Y383 392 aaKnown RBP25.5■■□□□ 1.67
NME3-202ENST00000561637 PCDHB1Q9Y5F3 818 aa25.5■■□□□ 1.67
NME3-202ENST00000561637 H3BRJ5 948 aa25.49■■□□□ 1.67
NME3-202ENST00000561637 TM7SF2O76062 418 aa25.49■■□□□ 1.67
NME3-202ENST00000561637 CSF2P04141 144 aa25.49■■□□□ 1.67
NME3-202ENST00000561637 HCAR3P49019 387 aa25.49■■□□□ 1.67
NME3-202ENST00000561637 SLC10A7Q0GE19 358 aa25.49■■□□□ 1.67
NME3-202ENST00000561637 UGP2Q16851 508 aa25.49■■□□□ 1.67
NME3-202ENST00000561637 CINPQ9BW66 212 aaPredicted RBP25.49■■□□□ 1.67
NME3-202ENST00000561637 PACSIN1Q9BY11 444 aa25.49■■□□□ 1.67
NME3-202ENST00000561637 CPNE5Q9HCH3 593 aa25.49■■□□□ 1.67
NME3-202ENST00000561637 BZW2Q9Y6E2 419 aaKnown RBP25.49■■□□□ 1.67
NME3-202ENST00000561637 K7ESM1 405 aa25.48■■□□□ 1.67
NME3-202ENST00000561637 PEX11BO96011 259 aa25.48■■□□□ 1.67
NME3-202ENST00000561637 CD48P09326 243 aa25.48■■□□□ 1.67
NME3-202ENST00000561637 XPAP23025 273 aaPredicted RBP25.48■■□□□ 1.67
NME3-202ENST00000561637 ACP1P24666 158 aa25.48■■□□□ 1.67
NME3-202ENST00000561637 EIF4A3P38919 411 aaKnown RBP25.48■■□□□ 1.67
NME3-202ENST00000561637 MMRN1Q13201 1228 aa25.48■■□□□ 1.67
NME3-202ENST00000561637 CCDC122Q5T0U0 273 aa25.48■■□□□ 1.67
NME3-202ENST00000561637 ALKBH5Q6P6C2 394 aaKnown RBP25.48■■□□□ 1.67
NME3-202ENST00000561637 DCP2Q8IU60 420 aaKnown RBP25.48■■□□□ 1.67
NME3-202ENST00000561637 IFT43Q96FT9 208 aa25.48■■□□□ 1.67
NME3-202ENST00000561637 APOLD1Q96LR9 279 aa25.48■■□□□ 1.67
NME3-202ENST00000561637 RIOK3O14730 519 aaKnown RBP25.47■■□□□ 1.67
NME3-202ENST00000561637 C6P13671 934 aa25.47■■□□□ 1.67
NME3-202ENST00000561637 JUNDP17535 347 aa25.47■■□□□ 1.67
NME3-202ENST00000561637 MMP12P39900 470 aa25.47■■□□□ 1.67
NME3-202ENST00000561637 DAB2P98082 770 aa25.47■■□□□ 1.67
NME3-202ENST00000561637 IL10RBQ08334 325 aa25.47■■□□□ 1.67
NME3-202ENST00000561637 C1orf61Q13536 156 aa25.47■■□□□ 1.67
NME3-202ENST00000561637 TCEA2Q15560 299 aa25.47■■□□□ 1.67
NME3-202ENST00000561637 WSCD2Q2TBF2 565 aa25.47■■□□□ 1.67
NME3-202ENST00000561637 KCTD16Q68DU8 428 aa25.47■■□□□ 1.67
NME3-202ENST00000561637 ZSCAN30Q86W11 494 aa25.47■■□□□ 1.67
NME3-202ENST00000561637 PGBD5Q8N414 524 aa25.47■■□□□ 1.67
NME3-202ENST00000561637 FAM174AQ8TBP5 190 aa25.47■■□□□ 1.67
NME3-202ENST00000561637 DONSONQ9NYP3 566 aa25.47■■□□□ 1.67
NME3-202ENST00000561637 SCAMP1O15126 338 aa25.46■■□□□ 1.67
NME3-202ENST00000561637 GCATO75600 419 aa25.46■■□□□ 1.67
NME3-202ENST00000561637 MT-CO3P00414 261 aa25.46■■□□□ 1.67
NME3-202ENST00000561637 CELA2BP08218 269 aaPredicted RBP25.46■■□□□ 1.67
NME3-202ENST00000561637 GJC1P36383 396 aa25.46■■□□□ 1.67
NME3-202ENST00000561637 CSNK1DP48730 415 aa25.46■■□□□ 1.67
NME3-202ENST00000561637 LIG3P49916 1009 aa25.46■■□□□ 1.67
NME3-202ENST00000561637 HNRNPKP61978 463 aaKnown RBP eCLIP25.46■■□□□ 1.67
NME3-202ENST00000561637 RALGDSQ12967 914 aa25.46■■□□□ 1.67
NME3-202ENST00000561637 PIGHQ14442 188 aaPredicted RBP25.46■■□□□ 1.67
NME3-202ENST00000561637 DEFB133Q30KQ1 61 aa25.46■■□□□ 1.67
NME3-202ENST00000561637 ATP13A4Q4VNC1 1196 aa25.46■■□□□ 1.67
NME3-202ENST00000561637 BOLA3Q53S33 107 aa25.46■■□□□ 1.67
NME3-202ENST00000561637 ARHGAP40Q5TG30 622 aa25.46■■□□□ 1.67
NME3-202ENST00000561637 NIPA2Q8N8Q9 360 aa25.46■■□□□ 1.67
NME3-202ENST00000561637 ZNF248Q8NDW4 579 aa25.46■■□□□ 1.67
NME3-202ENST00000561637 LMX1AQ8TE12 382 aa25.46■■□□□ 1.67
NME3-202ENST00000561637 NLGN3Q9NZ94 848 aa25.46■■□□□ 1.67
NME3-202ENST00000561637 ATP8A1Q9Y2Q0 1164 aa25.46■■□□□ 1.67
NME3-202ENST00000561637 CAPN8A6NHC0 703 aa25.45■■□□□ 1.66
NME3-202ENST00000561637 CASC3O15234 703 aaKnown RBP25.45■■□□□ 1.66
NME3-202ENST00000561637 ARL4AP40617 200 aa25.45■■□□□ 1.66
NME3-202ENST00000561637 SCNN1BP51168 640 aa25.45■■□□□ 1.66
NME3-202ENST00000561637 LY6DQ14210 128 aa25.45■■□□□ 1.66
NME3-202ENST00000561637 LBRQ14739 615 aaKnown RBP25.45■■□□□ 1.66
NME3-202ENST00000561637 TMCO4Q5TGY1 634 aa25.45■■□□□ 1.66
NME3-202ENST00000561637 TMCO3Q6UWJ1 677 aa25.45■■□□□ 1.66
NME3-202ENST00000561637 ECHDC3Q96DC8 303 aa25.45■■□□□ 1.66
NME3-202ENST00000561637 HIC2Q96JB3 615 aa25.45■■□□□ 1.66
NME3-202ENST00000561637 ZNF641Q96N77 438 aaPredicted RBP25.45■■□□□ 1.66
NME3-202ENST00000561637 TUBGCP5Q96RT8 1024 aa25.45■■□□□ 1.66
NME3-202ENST00000561637 ATP13A3Q9H7F0 1226 aa25.45■■□□□ 1.66
NME3-202ENST00000561637 IP6K2Q9UHH9 426 aa25.45■■□□□ 1.66
NME3-202ENST00000561637 A8MX80 341 aa25.44■■□□□ 1.66
NME3-202ENST00000561637 AQP9O43315 295 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms