RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 PI4KAP42356 2102 aa10.97□□□□□ -0.65
TPM1-217ENST00000559108 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.96□□□□□ -0.65
TPM1-217ENST00000559108 A0A1W2PQU0 124 aa10.96□□□□□ -0.65
TPM1-217ENST00000559108 METTL12A8MUP2 240 aa10.96□□□□□ -0.65
TPM1-217ENST00000559108 AURKAO14965 403 aa10.96□□□□□ -0.65
TPM1-217ENST00000559108 RAD51BO15315 384 aa10.96□□□□□ -0.65
TPM1-217ENST00000559108 SLC7A4O43246 635 aa10.96□□□□□ -0.65
TPM1-217ENST00000559108 MTSS1O43312 755 aa10.96□□□□□ -0.65
TPM1-217ENST00000559108 LATO43561 262 aa10.96□□□□□ -0.65
TPM1-217ENST00000559108 RNGTTO60942 597 aaKnown RBP10.96□□□□□ -0.65
TPM1-217ENST00000559108 PHF2O75151 1096 aa10.96□□□□□ -0.65
TPM1-217ENST00000559108 CPP00450 1065 aa10.96□□□□□ -0.65
TPM1-217ENST00000559108 AGTP01019 485 aa10.96□□□□□ -0.65
TPM1-217ENST00000559108 PIRTP0C851 137 aa10.96□□□□□ -0.65
TPM1-217ENST00000559108 MSNP26038 577 aaKnown RBP10.96□□□□□ -0.65
TPM1-217ENST00000559108 OXTRP30559 389 aa10.96□□□□□ -0.65
TPM1-217ENST00000559108 CASQ1P31415 396 aa10.96□□□□□ -0.65
TPM1-217ENST00000559108 COILP38432 576 aaPredicted RBP10.96□□□□□ -0.65
TPM1-217ENST00000559108 PTGIRP43119 386 aa10.96□□□□□ -0.65
TPM1-217ENST00000559108 WNT3AP56704 352 aa10.96□□□□□ -0.65
TPM1-217ENST00000559108 MRPS25P82663 173 aaKnown RBP10.96□□□□□ -0.65
TPM1-217ENST00000559108 MSLNQ13421 630 aaPredicted RBP10.96□□□□□ -0.65
TPM1-217ENST00000559108 TRIP13Q15645 432 aaPredicted RBP10.96□□□□□ -0.65
TPM1-217ENST00000559108 CNGA3Q16281 694 aa10.96□□□□□ -0.65
TPM1-217ENST00000559108 ZNF284Q2VY69 593 aa10.96□□□□□ -0.65
TPM1-217ENST00000559108 KIAA0895LQ68EN5 471 aa10.96□□□□□ -0.65
TPM1-217ENST00000559108 DENND5AQ6IQ26 1287 aa10.96□□□□□ -0.65
TPM1-217ENST00000559108 FBXL19Q6PCT2 694 aa10.96□□□□□ -0.65
TPM1-217ENST00000559108 TTC7BQ86TV6 843 aa10.96□□□□□ -0.65
TPM1-217ENST00000559108 ZSCAN30Q86W11 494 aa10.96□□□□□ -0.65
TPM1-217ENST00000559108 BBS5Q8N3I7 341 aa10.96□□□□□ -0.65
TPM1-217ENST00000559108 LPCAT1Q8NF37 534 aa10.96□□□□□ -0.65
TPM1-217ENST00000559108 IPMKQ8NFU5 416 aa10.96□□□□□ -0.65
TPM1-217ENST00000559108 OR2T34Q8NGX1 318 aa10.96□□□□□ -0.65
TPM1-217ENST00000559108 SPACA7Q96KW9 195 aa10.96□□□□□ -0.65
TPM1-217ENST00000559108 VAT1Q99536 393 aa10.96□□□□□ -0.65
TPM1-217ENST00000559108 PRRX2Q99811 253 aa10.96□□□□□ -0.65
TPM1-217ENST00000559108 KCNH6Q9H252 994 aa10.96□□□□□ -0.65
TPM1-217ENST00000559108 SGK2Q9HBY8 427 aa10.96□□□□□ -0.65
TPM1-217ENST00000559108 PCDH9Q9HC56 1237 aa10.96□□□□□ -0.65
TPM1-217ENST00000559108 FZD3Q9NPG1 666 aa10.96□□□□□ -0.65
TPM1-217ENST00000559108 TRHDEQ9UKU6 1024 aa10.96□□□□□ -0.65
TPM1-217ENST00000559108 ZNF148Q9UQR1 794 aa10.96□□□□□ -0.65
TPM1-217ENST00000559108 DRG1Q9Y295 367 aaKnown RBP10.96□□□□□ -0.65
TPM1-217ENST00000559108 COQ6Q9Y2Z9 468 aa10.96□□□□□ -0.65
TPM1-217ENST00000559108 HCN4Q9Y3Q4 1203 aa10.96□□□□□ -0.65
TPM1-217ENST00000559108 TBC1D3DA0A087WVF3 549 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 TBC1D3IA0A087WXS9 549 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 TBC1D3EA0A087X179 549 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 TBC1D3KA0A087X1G2 549 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 A0A0J9YYE9 177 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 LOC285095A0A1B0GVY8 99 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 TCRBV7S3A2A0A539 114 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 TBC1D3FA6NER0 549 aaPredicted RBP10.95□□□□□ -0.66
TPM1-217ENST00000559108 IGLON5A6NGN9 336 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 GOLGA8CPA6NN73 597 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 PATE3B3GLJ2 98 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 TBC1D3LB9A6J9 549 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 AP1G1O43747 822 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 MMP20O60882 483 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 OPHN1O60890 802 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 FSBPO95073 299 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 IFNB1P01574 187 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 TRBC1P01850 177 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 WNT1P04628 370 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 SERPINF2P08697 491 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 C1SP09871 688 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 TBC1D3HP0C7X1 549 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 TGM1P22735 817 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 CNR2P34972 360 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 HNF1BP35680 557 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 GRIA1P42261 906 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 MAPK8P45983 427 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 DHPSP49366 369 aaPredicted RBP10.95□□□□□ -0.66
TPM1-217ENST00000559108 BNC1Q01954 994 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 RAD51Q06609 339 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 SLC14A2Q15849 920 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 P3H1Q32P28 736 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 TMEM52BQ4KMG9 183 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 SIRPB2Q5JXA9 342 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 ARMC12Q5T9G4 340 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 TBC1D3GQ6DHY5 549 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 TBC1D3CQ6IPX1 549 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 BRAT1Q6PJG6 821 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 CEP68Q76N32 757 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 DPPA4Q7L190 304 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 ASCL5Q7RTU5 278 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 HSD11B1LQ7Z5J1 315 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 TBC1D3Q8IZP1 549 aaPredicted RBP10.95□□□□□ -0.66
TPM1-217ENST00000559108 CBARPQ8N350 705 aaPredicted RBP10.95□□□□□ -0.66
TPM1-217ENST00000559108 HCAR2Q8TDS4 363 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 MAGOHBQ96A72 148 aaKnown RBP10.95□□□□□ -0.66
TPM1-217ENST00000559108 PPP1R16AQ96I34 528 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 SLC6A18Q96N87 628 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 KLF6Q99612 283 aaPredicted RBP10.95□□□□□ -0.66
TPM1-217ENST00000559108 MYOCQ99972 504 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 FICDQ9BVA6 458 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 FRMD8P1Q9BZ68 369 aaPredicted RBP10.95□□□□□ -0.66
TPM1-217ENST00000559108 PARD6AQ9NPB6 346 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 FSCN3Q9NQT6 498 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms