RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 CDH4P55283 916 aa11.97□□□□□ -0.49
SMAD3-206ENST00000558739 CHAF1BQ13112 559 aa11.97□□□□□ -0.49
SMAD3-206ENST00000558739 NR1D2Q14995 579 aa11.97□□□□□ -0.49
SMAD3-206ENST00000558739 C5orf22Q49AR2 442 aa11.97□□□□□ -0.49
SMAD3-206ENST00000558739 ZNF805Q5CZA5 627 aa11.97□□□□□ -0.49
SMAD3-206ENST00000558739 OTUD1Q5VV17 481 aaPredicted RBP11.97□□□□□ -0.49
SMAD3-206ENST00000558739 ANKRD40Q6AI12 368 aa11.97□□□□□ -0.49
SMAD3-206ENST00000558739 ZSCAN30Q86W11 494 aa11.97□□□□□ -0.49
SMAD3-206ENST00000558739 ZNF761Q86XN6 746 aaPredicted RBP11.97□□□□□ -0.49
SMAD3-206ENST00000558739 RYBPQ8N488 228 aaPredicted RBP11.97□□□□□ -0.49
SMAD3-206ENST00000558739 PCDH20Q8N6Y1 951 aaKnown RBP11.97□□□□□ -0.49
SMAD3-206ENST00000558739 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.97□□□□□ -0.49
SMAD3-206ENST00000558739 NETO2Q8NC67 525 aa11.97□□□□□ -0.49
SMAD3-206ENST00000558739 OR4D9Q8NGE8 314 aa11.97□□□□□ -0.49
SMAD3-206ENST00000558739 FAXDC2Q96IV6 333 aa11.97□□□□□ -0.49
SMAD3-206ENST00000558739 C5orf34Q96MH7 638 aa11.97□□□□□ -0.49
SMAD3-206ENST00000558739 WDR92Q96MX6 357 aa11.97□□□□□ -0.49
SMAD3-206ENST00000558739 KLHL32Q96NJ5 620 aa11.97□□□□□ -0.49
SMAD3-206ENST00000558739 APOOQ9BUR5 198 aa11.97□□□□□ -0.49
SMAD3-206ENST00000558739 SUDS3Q9H7L9 328 aaPredicted RBP11.97□□□□□ -0.49
SMAD3-206ENST00000558739 POPDC2Q9HBU9 364 aa11.97□□□□□ -0.49
SMAD3-206ENST00000558739 EXOC1Q9NV70 894 aa11.97□□□□□ -0.49
SMAD3-206ENST00000558739 MAP10Q9P2G4 905 aa11.97□□□□□ -0.49
SMAD3-206ENST00000558739 RPS6KL1Q9Y6S9 549 aa11.97□□□□□ -0.49
SMAD3-206ENST00000558739 DGKBQ9Y6T7 804 aa11.97□□□□□ -0.49
SMAD3-206ENST00000558739 MORC2Q9Y6X9 1032 aaPredicted RBP11.97□□□□□ -0.49
SMAD3-206ENST00000558739 JMJD1CQ15652 2540 aa11.97□□□□□ -0.49
SMAD3-206ENST00000558739 A0A1B0GTL3 188 aa11.96□□□□□ -0.49
SMAD3-206ENST00000558739 CDC14CA4D256 554 aa11.96□□□□□ -0.49
SMAD3-206ENST00000558739 A8MU76 341 aa11.96□□□□□ -0.49
SMAD3-206ENST00000558739 E5RJQ4 531 aa11.96□□□□□ -0.49
SMAD3-206ENST00000558739 KRIT1O00522 736 aa11.96□□□□□ -0.49
SMAD3-206ENST00000558739 GRAP2O75791 330 aa11.96□□□□□ -0.49
SMAD3-206ENST00000558739 ZNF28P17035 718 aa11.96□□□□□ -0.49
SMAD3-206ENST00000558739 HTR1BP28222 390 aa11.96□□□□□ -0.49
SMAD3-206ENST00000558739 GTF2H1P32780 548 aa11.96□□□□□ -0.49
SMAD3-206ENST00000558739 PEX5P50542 639 aa11.96□□□□□ -0.49
SMAD3-206ENST00000558739 RAB15P59190 212 aa11.96□□□□□ -0.49
SMAD3-206ENST00000558739 MC1RQ01726 317 aa11.96□□□□□ -0.49
SMAD3-206ENST00000558739 LRRC14Q15048 493 aa11.96□□□□□ -0.49
SMAD3-206ENST00000558739 CRTC2Q53ET0 693 aaPredicted RBP11.96□□□□□ -0.49
SMAD3-206ENST00000558739 SNAP47Q5SQN1 464 aa11.96□□□□□ -0.49
SMAD3-206ENST00000558739 ATXN7L2Q5T6C5 722 aaPredicted RBP11.96□□□□□ -0.49
SMAD3-206ENST00000558739 DENND1BQ6P3S1 775 aa11.96□□□□□ -0.49
SMAD3-206ENST00000558739 LEKR1Q6ZMV7 388 aa11.96□□□□□ -0.49
SMAD3-206ENST00000558739 C17orf82Q86X59 251 aaPredicted RBP11.96□□□□□ -0.49
SMAD3-206ENST00000558739 IRF2BP1Q8IU81 584 aa11.96□□□□□ -0.49
SMAD3-206ENST00000558739 CXorf40AQ8TE69 158 aa11.96□□□□□ -0.49
SMAD3-206ENST00000558739 RAB7BQ96AH8 199 aa11.96□□□□□ -0.49
SMAD3-206ENST00000558739 SPON2Q9BUD6 331 aa11.96□□□□□ -0.49
SMAD3-206ENST00000558739 MFRPQ9BY79 579 aa11.96□□□□□ -0.49
SMAD3-206ENST00000558739 CEP44Q9C0F1 390 aa11.96□□□□□ -0.49
SMAD3-206ENST00000558739 SLC12A6Q9UHW9 1150 aa11.96□□□□□ -0.49
SMAD3-206ENST00000558739 ITGB1BP2Q9UKP3 347 aa11.96□□□□□ -0.49
SMAD3-206ENST00000558739 MAPK8IP1Q9UQF2 711 aa11.96□□□□□ -0.49
SMAD3-206ENST00000558739 TRAF3IP3Q9Y228 551 aa11.96□□□□□ -0.49
SMAD3-206ENST00000558739 POLHQ9Y253 713 aa11.96□□□□□ -0.49
SMAD3-206ENST00000558739 SLC5A6Q9Y289 635 aa11.96□□□□□ -0.49
SMAD3-206ENST00000558739 TMEM184BQ9Y519 407 aaPredicted RBP11.96□□□□□ -0.49
SMAD3-206ENST00000558739 ST14Q9Y5Y6 855 aa11.96□□□□□ -0.49
SMAD3-206ENST00000558739 PCSK5Q92824 1860 aa11.95□□□□□ -0.5
SMAD3-206ENST00000558739 IGHV1OR21-1A0A087WYE8 117 aa11.95□□□□□ -0.5
SMAD3-206ENST00000558739 RHPN2P1A8MT19 583 aa11.95□□□□□ -0.5
SMAD3-206ENST00000558739 PPM1DO15297 605 aa11.95□□□□□ -0.5
SMAD3-206ENST00000558739 ECEL1O95672 775 aa11.95□□□□□ -0.5
SMAD3-206ENST00000558739 TNFP01375 233 aa11.95□□□□□ -0.5
SMAD3-206ENST00000558739 PRR29P0C7W0 189 aa11.95□□□□□ -0.5
SMAD3-206ENST00000558739 TIMP2P16035 220 aa11.95□□□□□ -0.5
SMAD3-206ENST00000558739 TFE3P19532 575 aaPredicted RBP11.95□□□□□ -0.5
SMAD3-206ENST00000558739 BMP6P22004 513 aa11.95□□□□□ -0.5
SMAD3-206ENST00000558739 DLSTP36957 453 aa11.95□□□□□ -0.5
SMAD3-206ENST00000558739 GPD2P43304 727 aa11.95□□□□□ -0.5
SMAD3-206ENST00000558739 NASPP49321 788 aaPredicted RBP11.95□□□□□ -0.5
SMAD3-206ENST00000558739 YWHAZP63104 245 aaKnown RBP11.95□□□□□ -0.5
SMAD3-206ENST00000558739 NME3Q13232 169 aa11.95□□□□□ -0.5
SMAD3-206ENST00000558739 TRA2AQ13595 282 aaKnown RBP eCLIP11.95□□□□□ -0.5
SMAD3-206ENST00000558739 NAA30Q147X3 362 aaPredicted RBP11.95□□□□□ -0.5
SMAD3-206ENST00000558739 CNGA2Q16280 664 aa11.95□□□□□ -0.5
SMAD3-206ENST00000558739 BEND5Q7L4P6 421 aa11.95□□□□□ -0.5
SMAD3-206ENST00000558739 NRROSQ86YC3 692 aa11.95□□□□□ -0.5
SMAD3-206ENST00000558739 DEFB106AQ8N104 65 aa11.95□□□□□ -0.5
SMAD3-206ENST00000558739 PELI3Q8N2H9 469 aa11.95□□□□□ -0.5
SMAD3-206ENST00000558739 LINC00301Q8NCQ3 95 aa11.95□□□□□ -0.5
SMAD3-206ENST00000558739 PTCD2Q8WV60 388 aaKnown RBP11.95□□□□□ -0.5
SMAD3-206ENST00000558739 EFHD1Q9BUP0 239 aa11.95□□□□□ -0.5
SMAD3-206ENST00000558739 C1QTNF7Q9BXJ2 289 aa11.95□□□□□ -0.5
SMAD3-206ENST00000558739 ZNF212Q9UDV6 495 aa11.95□□□□□ -0.5
SMAD3-206ENST00000558739 CROTQ9UKG9 612 aa11.95□□□□□ -0.5
SMAD3-206ENST00000558739 ZGRF1Q86YA3 2104 aa11.95□□□□□ -0.5
SMAD3-206ENST00000558739 TOR1BO14657 336 aa11.94□□□□□ -0.5
SMAD3-206ENST00000558739 SART1O43290 800 aaKnown RBP11.94□□□□□ -0.5
SMAD3-206ENST00000558739 CALUO43852 315 aaPredicted RBP11.94□□□□□ -0.5
SMAD3-206ENST00000558739 FGF1P05230 155 aa11.94□□□□□ -0.5
SMAD3-206ENST00000558739 PAEPP09466 180 aa11.94□□□□□ -0.5
SMAD3-206ENST00000558739 PSMC2P35998 433 aaKnown RBP11.94□□□□□ -0.5
SMAD3-206ENST00000558739 PGDP52209 483 aa11.94□□□□□ -0.5
SMAD3-206ENST00000558739 STK38Q15208 465 aa11.94□□□□□ -0.5
SMAD3-206ENST00000558739 TTC7BQ86TV6 843 aa11.94□□□□□ -0.5
SMAD3-206ENST00000558739 SLC34A3Q8N130 599 aa11.94□□□□□ -0.5
SMAD3-206ENST00000558739 OR56A4Q8NGH8 313 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms