RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 MRNIPQ6NTE8 343 aa3.71□□□□□ -1.82
ATXN3-248ENST00000558190 LEMD2Q8NC56 503 aa3.71□□□□□ -1.82
ATXN3-248ENST00000558190 ITPKCQ96DU7 683 aa3.71□□□□□ -1.82
ATXN3-248ENST00000558190 EMILIN2Q9BXX0 1053 aa3.71□□□□□ -1.82
ATXN3-248ENST00000558190 A0A1W2PPW3 197 aa3.71□□□□□ -1.82
ATXN3-248ENST00000558190 A8MX80 341 aa3.71□□□□□ -1.82
ATXN3-248ENST00000558190 KPNA5O15131 536 aa3.71□□□□□ -1.82
ATXN3-248ENST00000558190 GLRA3O75311 464 aa3.71□□□□□ -1.82
ATXN3-248ENST00000558190 CD4P01730 458 aa3.71□□□□□ -1.82
ATXN3-248ENST00000558190 C16orf86Q6ZW13 317 aa3.71□□□□□ -1.82
ATXN3-248ENST00000558190 ARPINQ7Z6K5 226 aa3.71□□□□□ -1.82
ATXN3-248ENST00000558190 FOPNLQ96NB1 174 aa3.71□□□□□ -1.82
ATXN3-248ENST00000558190 SLC30A2Q9BRI3 323 aa3.71□□□□□ -1.82
ATXN3-248ENST00000558190 TBC1D17Q9HA65 648 aa3.71□□□□□ -1.82
ATXN3-248ENST00000558190 LOC100509620A0A075B734 347 aa3.71□□□□□ -1.82
ATXN3-248ENST00000558190 TBX3O15119 743 aa3.71□□□□□ -1.82
ATXN3-248ENST00000558190 FADS2O95864 444 aaKnown RBP3.71□□□□□ -1.82
ATXN3-248ENST00000558190 C2P06681 752 aa3.71□□□□□ -1.82
ATXN3-248ENST00000558190 CSF1RP07333 972 aa3.71□□□□□ -1.82
ATXN3-248ENST00000558190 SLC7A2P52569 658 aa3.71□□□□□ -1.82
ATXN3-248ENST00000558190 CMTR2Q8IYT2 770 aaKnown RBP3.71□□□□□ -1.82
ATXN3-248ENST00000558190 TCTEX1D2Q8WW35 142 aa3.71□□□□□ -1.82
ATXN3-248ENST00000558190 GFM1Q96RP9 751 aaKnown RBP3.71□□□□□ -1.82
ATXN3-248ENST00000558190 FEM1AQ9BSK4 669 aa3.71□□□□□ -1.82
ATXN3-248ENST00000558190 NDUFAF4Q9P032 175 aa3.71□□□□□ -1.82
ATXN3-248ENST00000558190 ERBB3P21860 1342 aa3.71□□□□□ -1.82
ATXN3-248ENST00000558190 SPESP1Q6UW49 350 aa3.71□□□□□ -1.82
ATXN3-248ENST00000558190 SLC41A1Q8IVJ1 513 aa3.71□□□□□ -1.82
ATXN3-248ENST00000558190 ACMSDQ8TDX5 336 aa3.71□□□□□ -1.82
ATXN3-248ENST00000558190 CELF6Q96J87 481 aaKnown RBP3.71□□□□□ -1.82
ATXN3-248ENST00000558190 PPM1MQ96MI6 270 aa3.71□□□□□ -1.82
ATXN3-248ENST00000558190 SPATA33Q96N06 139 aa3.71□□□□□ -1.82
ATXN3-248ENST00000558190 MXRA8Q9BRK3 442 aa3.71□□□□□ -1.82
ATXN3-248ENST00000558190 PAK6Q9NQU5 681 aaPredicted RBP3.71□□□□□ -1.82
ATXN3-248ENST00000558190 FAM234BA2RU67 622 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 CD3EAPO15446 510 aaKnown RBP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 OIP5O43482 229 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 S100A2P29034 98 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 ACADSBP45954 432 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 CLK2P49760 499 aaKnown RBP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 RPL26P61254 145 aaKnown RBP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 CUL2Q13617 745 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 ASRGL1Q7L266 308 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 SRFBP1Q8NEF9 429 aaKnown RBP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 ZNF350Q9GZX5 532 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 TMEM8AQ9HCN3 771 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 RPS6KA6Q9UK32 745 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 MAGEB1P43366 347 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 PPP3CAQ08209 521 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 ELP6Q0PNE2 266 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 AP5B1Q2VPB7 878 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 CCDC157Q569K6 752 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 FCRL3Q96P31 734 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 DDX4Q9NQI0 724 aaKnown RBP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 LATS2Q9NRM7 1088 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 TOPORSQ9NS56 1045 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 ANKEF1Q9NU02 776 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 MED11Q9P086 117 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 I3L521 148 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 AZIN1O14977 448 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 OGTO15294 1046 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 CDRT1O95170 752 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 PSMA3P25788 255 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 ZNF177Q13360 481 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 IER5Q5VY09 327 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 CHST15Q7LFX5 561 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 GALNT12Q8IXK2 581 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 MMTAG2Q9BU76 263 aaKnown RBP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 SEZ6LQ9BYH1 1024 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 DHX33Q9H6R0 707 aaKnown RBP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 ZDHHC18Q9NUE0 388 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 PCDHB8Q9UN66 801 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 HOXD13P35453 343 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 CDH8P55286 799 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 AP3B2Q13367 1082 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 GRIK4Q16099 956 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 TIMM50Q3ZCQ8 353 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 UGT3A1Q6NUS8 523 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 LRRC57Q8N9N7 239 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 OR56A4Q8NGH8 313 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 S100PBPQ96BU1 408 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 TMEM185BQ9H7F4 350 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 ADAM28Q9UKQ2 775 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 KPNA3O00505 521 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 VPS26AO75436 327 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 FXR2P51116 673 aaKnown RBP eCLIP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 ALDH3A2P51648 485 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 C1DQ13901 141 aaKnown RBP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 SHROOM1Q2M3G4 852 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 LRRC66Q68CR7 880 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 ARSKQ6UWY0 536 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 FAM160B2Q86V87 743 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 ABHD11Q8NFV4 315 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 HTR3CQ8WXA8 447 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 NCSTNQ92542 709 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 GAL3ST3Q96A11 431 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 PIGUQ9H490 435 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 ZMAT5Q9UDW3 170 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms