RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 HTR1BP28222 390 aa14.28□□□□□ -0.12
SNX6-210ENST00000557341 RGRP47804 291 aa14.28□□□□□ -0.12
SNX6-210ENST00000557341 CSNK1DP48730 415 aa14.28□□□□□ -0.12
SNX6-210ENST00000557341 RPIAP49247 311 aa14.28□□□□□ -0.12
SNX6-210ENST00000557341 PEX5P50542 639 aa14.28□□□□□ -0.12
SNX6-210ENST00000557341 BLKP51451 505 aa14.28□□□□□ -0.12
SNX6-210ENST00000557341 IL10RBQ08334 325 aa14.28□□□□□ -0.12
SNX6-210ENST00000557341 AGERQ15109 404 aa14.28□□□□□ -0.12
SNX6-210ENST00000557341 WSCD2Q2TBF2 565 aa14.28□□□□□ -0.12
SNX6-210ENST00000557341 TDRD12Q587J7 1177 aaKnown RBP14.28□□□□□ -0.12
SNX6-210ENST00000557341 FIGNQ5HY92 759 aa14.28□□□□□ -0.12
SNX6-210ENST00000557341 FAXCQ5TGI0 409 aa14.28□□□□□ -0.12
SNX6-210ENST00000557341 AFMIDQ63HM1 303 aa14.28□□□□□ -0.12
SNX6-210ENST00000557341 EFL1Q7Z2Z2 1120 aaKnown RBP14.28□□□□□ -0.12
SNX6-210ENST00000557341 SRLQ86TD4 932 aa14.28□□□□□ -0.12
SNX6-210ENST00000557341 PAF1Q8N7H5 531 aa14.28□□□□□ -0.12
SNX6-210ENST00000557341 FGF11Q92914 225 aa14.28□□□□□ -0.12
SNX6-210ENST00000557341 CRELD1Q96HD1 420 aa14.28□□□□□ -0.12
SNX6-210ENST00000557341 NAP1L5Q96NT1 182 aaPredicted RBP14.28□□□□□ -0.12
SNX6-210ENST00000557341 BOCQ9BWV1 1114 aa14.28□□□□□ -0.12
SNX6-210ENST00000557341 MYO1AQ9UBC5 1043 aa14.28□□□□□ -0.12
SNX6-210ENST00000557341 PNMA8BQ9ULN7 279 aaPredicted RBP14.28□□□□□ -0.12
SNX6-210ENST00000557341 ATMQ13315 3056 aa14.28□□□□□ -0.12
SNX6-210ENST00000557341 KALRNO60229 2985 aa14.27□□□□□ -0.12
SNX6-210ENST00000557341 TMEM110-MUSTN1A8MSY1 372 aa14.27□□□□□ -0.13
SNX6-210ENST00000557341 H3BRJ5 948 aa14.27□□□□□ -0.13
SNX6-210ENST00000557341 BUB1BO60566 1050 aaPredicted RBP14.27□□□□□ -0.13
SNX6-210ENST00000557341 USP12O75317 370 aa14.27□□□□□ -0.13
SNX6-210ENST00000557341 TSHRP16473 764 aa14.27□□□□□ -0.13
SNX6-210ENST00000557341 ITPKBP27987 946 aa14.27□□□□□ -0.13
SNX6-210ENST00000557341 PCK1P35558 622 aa14.27□□□□□ -0.13
SNX6-210ENST00000557341 ARL4AP40617 200 aa14.27□□□□□ -0.13
SNX6-210ENST00000557341 HCAR3P49019 387 aa14.27□□□□□ -0.13
SNX6-210ENST00000557341 LIG3P49916 1009 aa14.27□□□□□ -0.13
SNX6-210ENST00000557341 HK3P52790 923 aa14.27□□□□□ -0.13
SNX6-210ENST00000557341 ADKP55263 362 aaKnown RBP14.27□□□□□ -0.13
SNX6-210ENST00000557341 GABREP78334 506 aa14.27□□□□□ -0.13
SNX6-210ENST00000557341 BCL2L1Q07817 233 aa14.27□□□□□ -0.13
SNX6-210ENST00000557341 C1orf61Q13536 156 aa14.27□□□□□ -0.13
SNX6-210ENST00000557341 COL9A2Q14055 689 aaPredicted RBP14.27□□□□□ -0.13
SNX6-210ENST00000557341 DPYSQ14117 519 aa14.27□□□□□ -0.13
SNX6-210ENST00000557341 NFATC4Q14934 902 aa14.27□□□□□ -0.13
SNX6-210ENST00000557341 ACAP1Q15027 740 aa14.27□□□□□ -0.13
SNX6-210ENST00000557341 ELOCQ15369 112 aa14.27□□□□□ -0.13
SNX6-210ENST00000557341 SMTNL2Q2TAL5 461 aa14.27□□□□□ -0.13
SNX6-210ENST00000557341 ZSWIM9Q86XI8 627 aa14.27□□□□□ -0.13
SNX6-210ENST00000557341 CAMK1DQ8IU85 385 aa14.27□□□□□ -0.13
SNX6-210ENST00000557341 SLC35F3Q8IY50 421 aa14.27□□□□□ -0.13
SNX6-210ENST00000557341 FSTL5Q8N475 847 aaPredicted RBP14.27□□□□□ -0.13
SNX6-210ENST00000557341 LZTR1Q8N653 840 aa14.27□□□□□ -0.13
SNX6-210ENST00000557341 ATL2Q8NHH9 583 aa14.27□□□□□ -0.13
SNX6-210ENST00000557341 NAT6Q93015 286 aa14.27□□□□□ -0.13
SNX6-210ENST00000557341 ECHDC3Q96DC8 303 aa14.27□□□□□ -0.13
SNX6-210ENST00000557341 ISCUQ9H1K1 167 aa14.27□□□□□ -0.13
SNX6-210ENST00000557341 CWC15Q9P013 229 aaKnown RBP14.27□□□□□ -0.13
SNX6-210ENST00000557341 DOLKQ9UPQ8 538 aa14.27□□□□□ -0.13
SNX6-210ENST00000557341 MGAQ8IWI9 3026 aa14.26□□□□□ -0.13
SNX6-210ENST00000557341 CFAP69A5D8W1 941 aa14.26□□□□□ -0.13
SNX6-210ENST00000557341 MUSKO15146 869 aa14.26□□□□□ -0.13
SNX6-210ENST00000557341 TCEA3O75764 348 aa14.26□□□□□ -0.13
SNX6-210ENST00000557341 RASGRP1O95267 797 aa14.26□□□□□ -0.13
SNX6-210ENST00000557341 PRKCGP05129 697 aa14.26□□□□□ -0.13
SNX6-210ENST00000557341 MPOP05164 745 aa14.26□□□□□ -0.13
SNX6-210ENST00000557341 PCCBP05166 539 aa14.26□□□□□ -0.13
SNX6-210ENST00000557341 ALPIP09923 528 aa14.26□□□□□ -0.13
SNX6-210ENST00000557341 ELFN1P0C7U0 828 aa14.26□□□□□ -0.13
SNX6-210ENST00000557341 SKILP12757 684 aa14.26□□□□□ -0.13
SNX6-210ENST00000557341 CTSEP14091 401 aa14.26□□□□□ -0.13
SNX6-210ENST00000557341 TGM2P21980 687 aa14.26□□□□□ -0.13
SNX6-210ENST00000557341 RENBPP51606 427 aa14.26□□□□□ -0.13
SNX6-210ENST00000557341 PCBP4P57723 403 aaKnown RBP14.26□□□□□ -0.13
SNX6-210ENST00000557341 AP1S1P61966 158 aa14.26□□□□□ -0.13
SNX6-210ENST00000557341 TPM4P67936 248 aa14.26□□□□□ -0.13
SNX6-210ENST00000557341 NSUN2Q08J23 767 aaKnown RBP eCLIP14.26□□□□□ -0.13
SNX6-210ENST00000557341 MTM1Q13496 603 aa14.26□□□□□ -0.13
SNX6-210ENST00000557341 INPP5AQ14642 412 aa14.26□□□□□ -0.13
SNX6-210ENST00000557341 IQCB1Q15051 598 aa14.26□□□□□ -0.13
SNX6-210ENST00000557341 DPYSL2Q16555 572 aa14.26□□□□□ -0.13
SNX6-210ENST00000557341 ISXQ2M1V0 245 aa14.26□□□□□ -0.13
SNX6-210ENST00000557341 ALG11Q2TAA5 492 aa14.26□□□□□ -0.13
SNX6-210ENST00000557341 SOWAHCQ53LP3 525 aaPredicted RBP14.26□□□□□ -0.13
SNX6-210ENST00000557341 TMCO4Q5TGY1 634 aa14.26□□□□□ -0.13
SNX6-210ENST00000557341 ESRP1Q6NXG1 681 aaKnown RBP14.26□□□□□ -0.13
SNX6-210ENST00000557341 RBM44Q6ZP01 1051 aaKnown RBP14.26□□□□□ -0.13
SNX6-210ENST00000557341 ARHGAP36Q6ZRI8 547 aa14.26□□□□□ -0.13
SNX6-210ENST00000557341 HID1Q8IV36 788 aa14.26□□□□□ -0.13
SNX6-210ENST00000557341 LSMEM2Q8N112 164 aa14.26□□□□□ -0.13
SNX6-210ENST00000557341 TPCN2Q8NHX9 752 aa14.26□□□□□ -0.13
SNX6-210ENST00000557341 ZNF578Q96N58 590 aaPredicted RBP14.26□□□□□ -0.13
SNX6-210ENST00000557341 ZNF599Q96NL3 588 aa14.26□□□□□ -0.13
SNX6-210ENST00000557341 PSKH2Q96QS6 385 aa14.26□□□□□ -0.13
SNX6-210ENST00000557341 LGMNQ99538 433 aa14.26□□□□□ -0.13
SNX6-210ENST00000557341 FUCA2Q9BTY2 467 aa14.26□□□□□ -0.13
SNX6-210ENST00000557341 CLPBQ9H078 707 aa14.26□□□□□ -0.13
SNX6-210ENST00000557341 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.26□□□□□ -0.13
SNX6-210ENST00000557341 SEPT3Q9UH03 358 aa14.26□□□□□ -0.13
SNX6-210ENST00000557341 OR1A2Q9Y585 309 aa14.26□□□□□ -0.13
SNX6-210ENST00000557341 GCN1Q92616 2671 aaKnown RBP14.26□□□□□ -0.13
SNX6-210ENST00000557341 FASNP49327 2511 aaKnown RBP14.25□□□□□ -0.13
SNX6-210ENST00000557341 UNC13CQ8NB66 2214 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms