RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 SIGLEC16A6NMB1 481 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 FAM170BA6NMN3 283 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 KBTBD13C9JR72 458 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 ZNF701M0R085 212 aaPredicted RBP6.24□□□□□ -1.41
TDP1-215ENST00000556498 SNAP23O00161 211 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 TAF4O00268 1085 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 O00370 1275 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 PLK4O00444 970 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 DNALI1O14645 258 aaPredicted RBP6.24□□□□□ -1.41
TDP1-215ENST00000556498 ATP2A1O14983 1001 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 SYN3O14994 580 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 PMM2O15305 246 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 GSC2O15499 205 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 ADCY6O43306 1168 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 DCTN3O75935 186 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 CABYRO75952 493 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 IPO13O94829 963 aaKnown RBP6.24□□□□□ -1.41
TDP1-215ENST00000556498 HEXIM1O94992 359 aaKnown RBP6.24□□□□□ -1.41
TDP1-215ENST00000556498 RPP14O95059 124 aaKnown RBP6.24□□□□□ -1.41
TDP1-215ENST00000556498 GGPS1O95749 300 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 IGLV1-40P01703 118 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 PLEKP08567 350 aaPredicted RBP6.24□□□□□ -1.41
TDP1-215ENST00000556498 ACAA1P09110 424 aaPredicted RBP6.24□□□□□ -1.41
TDP1-215ENST00000556498 UBTFL1P0CB47 393 aaPredicted RBP6.24□□□□□ -1.41
TDP1-215ENST00000556498 SAGP10523 405 aaPredicted RBP6.24□□□□□ -1.41
TDP1-215ENST00000556498 NR2F1P10589 423 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 TXNP10599 105 aaKnown RBP6.24□□□□□ -1.41
TDP1-215ENST00000556498 APEHP13798 732 aaKnown RBP6.24□□□□□ -1.41
TDP1-215ENST00000556498 S100PP25815 95 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 HOXC8P31273 242 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 IL6STP40189 918 aaPredicted RBP6.24□□□□□ -1.41
TDP1-215ENST00000556498 GPR3P46089 330 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 SERPINB9P50453 376 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 NKX2-5P52952 324 aaPredicted RBP6.24□□□□□ -1.41
TDP1-215ENST00000556498 HUNKP57058 714 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 BNC1Q01954 994 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 SPIRE1Q08AE8 756 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 STX5Q13190 355 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 DMP1Q13316 513 aaPredicted RBP6.24□□□□□ -1.41
TDP1-215ENST00000556498 PPIL2Q13356 520 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 SNAPC2Q13487 334 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 DHCR24Q15392 516 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 STX1AQ16623 288 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 PTPN21Q16825 1174 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 TXNRD1Q16881 649 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 RSPO4Q2I0M5 234 aaPredicted RBP6.24□□□□□ -1.41
TDP1-215ENST00000556498 ESCO2Q56NI9 601 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 PXDC1Q5TGL8 231 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 AGAP7PQ5VUJ5 663 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 KIAA1211LQ6NV74 962 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 JMJD6Q6NYC1 403 aaPredicted RBP6.24□□□□□ -1.41
TDP1-215ENST00000556498 C5orf46Q6UWT4 87 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 ARSKQ6UWY0 536 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 LMBR1LQ6UX01 489 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 CCNI2Q6ZMN8 369 aaPredicted RBP6.24□□□□□ -1.41
TDP1-215ENST00000556498 RNF207Q6ZRF8 634 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 SPATC1Q76KD6 591 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 C16orf59Q7L2K0 433 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 ZNF765Q7L2R6 523 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 RABEPKQ7Z6M1 372 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 PLEKHH3Q7Z736 793 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 DSG4Q86SJ6 1040 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 TTC7BQ86TV6 843 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 SLC51AQ86UW1 340 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 TMEM200AQ86VY9 491 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 HORMAD1Q86X24 394 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 RALGPS2Q86X27 583 aaPredicted RBP6.24□□□□□ -1.41
TDP1-215ENST00000556498 THNSL2Q86YJ6 484 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 TDRPQ86YL5 185 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 ADGRG2Q8IZP9 1017 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 CENPSQ8N2Z9 138 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 SLC43A2Q8N370 569 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 SYNPOQ8N3V7 929 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 SLC25A41Q8N5S1 370 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 DTX3Q8N9I9 347 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 SNX31Q8N9S9 440 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 RNASE11Q8TAA1 199 aaKnown RBP6.24□□□□□ -1.41
TDP1-215ENST00000556498 RNF141Q8WVD5 230 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 DNAJA4Q8WW22 397 aaPredicted RBP6.24□□□□□ -1.41
TDP1-215ENST00000556498 METTL21AQ8WXB1 218 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 PRCCQ92733 491 aaPredicted RBP6.24□□□□□ -1.41
TDP1-215ENST00000556498 YIPF5Q969M3 257 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 DMRTA2Q96SC8 542 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 SPXQ9BT56 116 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 TARS2Q9BW92 718 aaKnown RBP6.24□□□□□ -1.41
TDP1-215ENST00000556498 SLC19A3Q9BZV2 496 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 BLZF1Q9H2G9 400 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 C11orf49Q9H6J7 331 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 LRRC40Q9H9A6 602 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 UNKLQ9H9P5 680 aaKnown RBP6.24□□□□□ -1.41
TDP1-215ENST00000556498 AGO4Q9HCK5 861 aaKnown RBP6.24□□□□□ -1.41
TDP1-215ENST00000556498 NT5MQ9NPB1 228 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 IL26Q9NPH9 171 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.24□□□□□ -1.41
TDP1-215ENST00000556498 AGPAT5Q9NUQ2 364 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 FGFR1OP2Q9NVK5 253 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.24□□□□□ -1.41
TDP1-215ENST00000556498 SLC39A10Q9ULF5 831 aa6.24□□□□□ -1.41
TDP1-215ENST00000556498 RUVBL2Q9Y230 463 aaKnown RBP6.24□□□□□ -1.41
TDP1-215ENST00000556498 SLC22A14Q9Y267 594 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms