RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 UNC119BA6NIH7 251 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 AGAP14A8MT82 685 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 GTPBP1O00178 669 aaKnown RBP5.33□□□□□ -1.56
SRP54-211ENST00000556445 PODXLO00592 558 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 CHMP2AO43633 222 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 SRGAP2O75044 1071 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 SLC22A3O75751 556 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 DDNO94850 711 aaPredicted RBP5.33□□□□□ -1.56
SRP54-211ENST00000556445 SPDEFO95238 335 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 GCNT3O95395 438 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 GYPCP04921 128 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 UQCRHP07919 91 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 SRGAP2BP0DMP2 458 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 ARP10275 920 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 EPB41P11171 864 aaKnown RBP5.33□□□□□ -1.56
SRP54-211ENST00000556445 DDCP20711 480 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 GCSHP23434 173 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 MLH1P40692 756 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 CSE1LP55060 971 aaKnown RBP5.33□□□□□ -1.56
SRP54-211ENST00000556445 PSMC5P62195 406 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 RBP5P82980 135 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 CYP4A11Q02928 519 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 TARDBPQ13148 414 aaKnown RBP eCLIP5.33□□□□□ -1.56
SRP54-211ENST00000556445 NOGQ13253 232 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 SNAPC2Q13487 334 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 SLC12A1Q13621 1099 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 CTTNQ14247 550 aaKnown RBP5.33□□□□□ -1.56
SRP54-211ENST00000556445 PPA1Q15181 289 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 STXBP2Q15833 593 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 SMN1Q16637 294 aaKnown RBP5.33□□□□□ -1.56
SRP54-211ENST00000556445 ZCWPW2Q504Y3 356 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 B3GNTL1Q67FW5 361 aaPredicted RBP5.33□□□□□ -1.56
SRP54-211ENST00000556445 NFRKBQ6P4R8 1299 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 C1orf186Q6ZWK4 172 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 NUP54Q7Z3B4 507 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 R3HCC1LQ7Z5L2 792 aaKnown RBP5.33□□□□□ -1.56
SRP54-211ENST00000556445 SFR1Q86XK3 245 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 TMEM139Q8IV31 216 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 C17orf53Q8N3J3 647 aaPredicted RBP5.33□□□□□ -1.56
SRP54-211ENST00000556445 NEK11Q8NG66 645 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 SPATA18Q8TC71 538 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 AFG1LQ8WV93 481 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 HDAC10Q969S8 669 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 MTFMTQ96DP5 389 aaKnown RBP5.33□□□□□ -1.56
SRP54-211ENST00000556445 SLC35A4Q96G79 324 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 FEM1CQ96JP0 617 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 INPP4AQ96PE3 977 aaPredicted RBP5.33□□□□□ -1.56
SRP54-211ENST00000556445 TAAR1Q96RJ0 339 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 TWNKQ96RR1 684 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 MAP7D2Q96T17 732 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 P2RX7Q99572 595 aaKnown RBP5.33□□□□□ -1.56
SRP54-211ENST00000556445 REEP2Q9BRK0 252 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 LXNQ9BS40 222 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 DDX23Q9BUQ8 820 aaKnown RBP5.33□□□□□ -1.56
SRP54-211ENST00000556445 HAUS4Q9H6D7 363 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 SYNCQ9H7C4 482 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 TMEM206Q9H813 350 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 MRPL44Q9H9J2 332 aaKnown RBP5.33□□□□□ -1.56
SRP54-211ENST00000556445 SERHLQ9NQF3 203 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 NECTIN3Q9NQS3 549 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 SYBUQ9NX95 663 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 RGL1Q9NZL6 768 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 EXOC7Q9UPT5 735 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 TMEM5Q9Y2B1 443 aa5.33□□□□□ -1.56
SRP54-211ENST00000556445 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.33□□□□□ -1.56
SRP54-211ENST00000556445 A0A1B0GTW7 788 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 TTC26A0AVF1 554 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 GLTPD2A6NH11 291 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 LRRC14BA6NHZ5 514 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 CLCA1A8K7I4 914 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 TMEM110-MUSTN1A8MSY1 372 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 KIAA0355O15063 1070 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 KRT86O43790 486 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 KIF5CO60282 957 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 QDPRP09417 244 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 CSH1P0DML2 217 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 CSH2P0DML3 217 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 TGM1P22735 817 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 NR2F2P24468 414 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 HNRNPH3P31942 346 aaKnown RBP5.32□□□□□ -1.56
SRP54-211ENST00000556445 ICAM3P32942 547 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 EPHX2P34913 555 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 NNMTP40261 264 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 HADHAP40939 763 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 PNLIPRP1P54315 467 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 PRKAA2P54646 552 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 PSMC6P62333 389 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 IL1RL1Q01638 556 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 MC1RQ01726 317 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 TAP1Q03518 808 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 OCA2Q04671 838 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 SCAPQ12770 1279 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 BFSP1Q12934 665 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 CHAF1BQ13112 559 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 PPIL2Q13356 520 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 TP53BP2Q13625 1128 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 BAATQ14032 418 aaPredicted RBP5.32□□□□□ -1.56
SRP54-211ENST00000556445 VGLL4Q14135 290 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 SEMA3AQ14563 771 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 HECTD2Q5U5R9 776 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms