RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 ZNF572Q7Z3I7 529 aaPredicted RBP7.69□□□□□ -1.18
TDP1-214ENST00000556063 PRPF39Q86UA1 669 aaKnown RBP7.69□□□□□ -1.18
TDP1-214ENST00000556063 CTAGE6Q86UF2 777 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 FAM124AQ86V42 546 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 CTAGE4Q8IX94 777 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 MAML2Q8IZL2 1156 aaPredicted RBP7.69□□□□□ -1.18
TDP1-214ENST00000556063 TBC1D3Q8IZP1 549 aaPredicted RBP7.69□□□□□ -1.18
TDP1-214ENST00000556063 AADATQ8N5Z0 425 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 IPMKQ8NFU5 416 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 OR2T34Q8NGX1 318 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 SPATA22Q8NHS9 363 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 GAB3Q8WWW8 586 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 RLN3Q8WXF3 142 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 NELL1Q92832 810 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 FOXJ1Q92949 421 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 ARRDC3Q96B67 414 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 TOE1Q96GM8 510 aaKnown RBP7.69□□□□□ -1.18
TDP1-214ENST00000556063 LRRC40Q9H9A6 602 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 PREBQ9HCU5 417 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 RAB6BQ9NRW1 208 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 WSB2Q9NYS7 404 aaPredicted RBP7.69□□□□□ -1.18
TDP1-214ENST00000556063 UBP1Q9NZI7 540 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 ASIC3Q9UHC3 531 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 RAB23Q9ULC3 237 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 CHKBQ9Y259 395 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 HCN4Q9Y3Q4 1203 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 MRFAP1Q9Y605 127 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 KNL1Q8NG31 2342 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 MUC6Q6W4X9 2439 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 SPTBN5Q9NRC6 3674 aaKnown RBP7.68□□□□□ -1.18
TDP1-214ENST00000556063 PLXND1Q9Y4D7 1925 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 THADAQ6YHU6 1953 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 IGHV1OR15-9A0A0B4J2B8 117 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 LOC285095A0A1B0GVY8 99 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 FAM187AA6NFU0 413 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 FAM47DPA6NHR8 397 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 ANKRD66B4E2M5 251 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 F5H423 210 aaPredicted RBP7.68□□□□□ -1.18
TDP1-214ENST00000556063 RIOK3O14730 519 aaKnown RBP7.68□□□□□ -1.18
TDP1-214ENST00000556063 PLRG1O43660 514 aaKnown RBP7.68□□□□□ -1.18
TDP1-214ENST00000556063 FZD6O60353 706 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 GJB3O75712 270 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 RHOBTB1O94844 696 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 METTL18O95568 372 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 AP2A1O95782 977 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 MT-CYBP00156 380 aaPredicted RBP7.68□□□□□ -1.18
TDP1-214ENST00000556063 FGF1P05230 155 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 APRTP07741 180 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 MMP2P08253 660 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 ACSL1P33121 698 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 ADCY8P40145 1251 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 DPP6P42658 865 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 VPS41P49754 854 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 ADPRHP54922 357 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 RPS21P63220 83 aaKnown RBP7.68□□□□□ -1.18
TDP1-214ENST00000556063 BASP1P80723 227 aaKnown RBP7.68□□□□□ -1.18
TDP1-214ENST00000556063 RPL6Q02878 288 aaKnown RBP7.68□□□□□ -1.18
TDP1-214ENST00000556063 DMWDQ09019 674 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 SEMA5AQ13591 1074 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 ARHGEF7Q14155 803 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 SIM2Q14190 667 aaPredicted RBP7.68□□□□□ -1.18
TDP1-214ENST00000556063 SPDYCQ5MJ68 293 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 SYCP2LQ5T4T6 812 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 PIP5KL1Q5T9C9 394 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 AGBL4Q5VU57 503 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 KIAA1161Q6NSJ0 714 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 TTC27Q6P3X3 843 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 KDELC1Q6UW63 502 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 PPP1R21Q6ZMI0 780 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 KDELC2Q7Z4H8 507 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 PCGF5Q86SE9 256 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 ZBTB44Q8NCP5 570 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 BBOF1Q8ND07 529 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 LPCAT1Q8NF37 534 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 CADM4Q8NFZ8 388 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 CXorf40AQ8TE69 158 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 PIH1D2Q8WWB5 315 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 FAM131CQ96AQ9 280 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 TADA1Q96BN2 335 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 SCRN2Q96FV2 425 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 OXNAD1Q96HP4 312 aaPredicted RBP7.68□□□□□ -1.18
TDP1-214ENST00000556063 KRT12Q99456 494 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 MLPHQ9BV36 600 aaPredicted RBP7.68□□□□□ -1.18
TDP1-214ENST00000556063 FICDQ9BVA6 458 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 GPR174Q9BXC1 333 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 C1QTNF7Q9BXJ2 289 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 RAB17Q9H0T7 212 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 ETNK1Q9HBU6 452 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 PCDH12Q9NPG4 1184 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 EIF2B3Q9NR50 452 aaKnown RBP7.68□□□□□ -1.18
TDP1-214ENST00000556063 KCTD5Q9NXV2 234 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 HACD3Q9P035 362 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 PPIL1Q9Y3C6 166 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 FADS3Q9Y5Q0 445 aa7.68□□□□□ -1.18
TDP1-214ENST00000556063 PI4KAP42356 2102 aa7.67□□□□□ -1.18
TDP1-214ENST00000556063 UNC80Q8N2C7 3258 aa7.67□□□□□ -1.18
TDP1-214ENST00000556063 A0A0J9YYE9 177 aa7.67□□□□□ -1.18
TDP1-214ENST00000556063 PRR23AA6NEV1 266 aa7.67□□□□□ -1.18
TDP1-214ENST00000556063 CAPN8A6NHC0 703 aa7.67□□□□□ -1.18
TDP1-214ENST00000556063 MEI4A8MW99 385 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms