RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 RPL38P63173 70 aaKnown RBP6.91□□□□□ -1.3
SYNE2-216ENST00000555002 SLC26A11Q86WA9 606 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 KBTBD8Q8NFY9 601 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 NKX2-3Q8TAU0 364 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 NAT14Q8WUY8 206 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 CEP295NLQ96MC4 621 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 RIPK2O43353 540 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 GAS2O43903 313 aaKnown RBP6.91□□□□□ -1.3
SYNE2-216ENST00000555002 UGT2B17O75795 530 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 RECQL5O94762 991 aaPredicted RBP6.91□□□□□ -1.3
SYNE2-216ENST00000555002 PIRTP0C851 137 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 CRADDP78560 199 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 CHAF1BQ13112 559 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 HSDL2Q6YN16 418 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 LINC00116Q8NCU8 138 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 ING5Q8WYH8 240 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 AP2M1Q96CW1 435 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 POLR3HQ9Y535 204 aaPredicted RBP6.91□□□□□ -1.3
SYNE2-216ENST00000555002 ADGRL3Q9HAR2 1447 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 CPSF4LA6NMK7 179 aaKnown RBP6.91□□□□□ -1.3
SYNE2-216ENST00000555002 KCNK1O00180 336 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 CYB5AP00167 134 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 SDHAF4Q5VUM1 108 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 C16orf86Q6ZW13 317 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 TMEM199Q8N511 208 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 HELQQ8TDG4 1101 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 ACER1Q8TDN7 264 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 NSUN4Q96CB9 384 aaKnown RBP6.91□□□□□ -1.3
SYNE2-216ENST00000555002 ZFRQ96KR1 1074 aaKnown RBP6.91□□□□□ -1.3
SYNE2-216ENST00000555002 ABCB9Q9NP78 766 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 BARX2Q9UMQ3 279 aaPredicted RBP6.91□□□□□ -1.3
SYNE2-216ENST00000555002 GRIP1Q9Y3R0 1128 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 MYPNQ86TC9 1320 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 MAGEB16A2A368 324 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 RGSL1A5PLK6 1076 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 LOC110117498-PIK3R3F6TDL0 507 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 TEX46H3BTG2 121 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 FOXN3O00409 490 aaPredicted RBP6.91□□□□□ -1.3
SYNE2-216ENST00000555002 CCL16O15467 120 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 DNTTP04053 509 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 FAUP35544 74 aaKnown RBP6.91□□□□□ -1.3
SYNE2-216ENST00000555002 WASP42768 502 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 MAGEA12P43365 314 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 NUP54Q7Z3B4 507 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 WDR49Q8IV35 697 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 PEX5LQ8IYB4 626 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 GHDCQ8N2G8 530 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 MEIOBQ8N635 442 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 CLHC1Q8NHS4 586 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 PIK3R3Q92569 461 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 CERS4Q9HA82 394 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 FBXO6Q9NRD1 293 aaPredicted RBP6.91□□□□□ -1.3
SYNE2-216ENST00000555002 DMTF1Q9Y222 760 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 MRPS33Q9Y291 106 aaKnown RBP6.91□□□□□ -1.3
SYNE2-216ENST00000555002 TFECO14948 347 aaPredicted RBP6.91□□□□□ -1.3
SYNE2-216ENST00000555002 CBFA2T3O75081 653 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 LINC00032P0C843 101 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 SRCP12931 536 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 SLC6A2P23975 617 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 AQP1P29972 269 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 IL18Q14116 193 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 SF1Q15637 639 aaKnown RBP6.91□□□□□ -1.3
SYNE2-216ENST00000555002 TTC7BQ86TV6 843 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 CCDC36Q8IYA8 594 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 OR7A2PQ8NGA2 310 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 GPR152Q8TDT2 470 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 DNAJA4Q8WW22 397 aaPredicted RBP6.91□□□□□ -1.3
SYNE2-216ENST00000555002 HTR3CQ8WXA8 447 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 ZNF558Q96NG5 402 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 CIDEBQ9UHD4 219 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 PTPRKQ15262 1439 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 NPEPPSL1A6NEC2 478 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 HMGCRP04035 888 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 ELFN1P0C7U0 828 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 FDPSP14324 419 aaKnown RBP6.91□□□□□ -1.3
SYNE2-216ENST00000555002 NAMPTP43490 491 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 ZC3H12AQ5D1E8 599 aaKnown RBP6.91□□□□□ -1.3
SYNE2-216ENST00000555002 STYK1Q6J9G0 422 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 RTL4Q6ZR62 310 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 APTXQ7Z2E3 356 aaKnown RBP6.91□□□□□ -1.3
SYNE2-216ENST00000555002 SPATA6LQ8N4H0 392 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 FIBCD1Q8N539 461 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 OR8D1Q8WZ84 308 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 ENY2Q9NPA8 101 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 LACTBL1A8MY62 500 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 DCXO43602 365 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 SLC37A4O43826 429 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 ZNF16P17020 682 aaPredicted RBP6.91□□□□□ -1.3
SYNE2-216ENST00000555002 SSR2P43308 183 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 PGDP52209 483 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 MRPS22P82650 360 aaKnown RBP6.91□□□□□ -1.3
SYNE2-216ENST00000555002 TEAD4Q15561 434 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 GXYLT1Q4G148 440 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 ZCCHC23Q6ZST2 131 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 ADGRG6Q86SQ4 1221 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 ZNF280BQ86YH2 543 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 TRAPPC9Q96Q05 1148 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 C2orf49Q9BVC5 232 aaPredicted RBP6.91□□□□□ -1.3
SYNE2-216ENST00000555002 TSPAN16Q9UKR8 245 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 CDH7Q9ULB5 785 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms