RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 GANCQ8TET4 914 aa8.12□□□□□ -1.11
LINC01397-201ENST00000554808 GAB3Q8WWW8 586 aa8.12□□□□□ -1.11
LINC01397-201ENST00000554808 FOXJ1Q92949 421 aa8.12□□□□□ -1.11
LINC01397-201ENST00000554808 RBM15Q96T37 977 aaKnown RBP eCLIP8.12□□□□□ -1.11
LINC01397-201ENST00000554808 C19orf43Q9BQ61 176 aa8.12□□□□□ -1.11
LINC01397-201ENST00000554808 CEP41Q9BYV8 373 aa8.12□□□□□ -1.11
LINC01397-201ENST00000554808 FRMD8Q9BZ67 464 aaPredicted RBP8.12□□□□□ -1.11
LINC01397-201ENST00000554808 DDX47Q9H0S4 455 aaKnown RBP8.12□□□□□ -1.11
LINC01397-201ENST00000554808 RAB17Q9H0T7 212 aa8.12□□□□□ -1.11
LINC01397-201ENST00000554808 MTG2Q9H4K7 406 aa8.12□□□□□ -1.11
LINC01397-201ENST00000554808 HACD3Q9P035 362 aa8.12□□□□□ -1.11
LINC01397-201ENST00000554808 SARDHQ9UL12 918 aa8.12□□□□□ -1.11
LINC01397-201ENST00000554808 RAI2Q9Y5P3 530 aa8.12□□□□□ -1.11
LINC01397-201ENST00000554808 CACNA1AO00555 2505 aa8.12□□□□□ -1.11
LINC01397-201ENST00000554808 LOC285095A0A1B0GVY8 99 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 ANTXRLA6NF34 631 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 C16orf96A6NNT2 1141 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 ANKRD66B4E2M5 251 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 PSMD11O00231 422 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 FZD6O60353 706 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 RNASEH2AO75792 299 aaKnown RBP8.11□□□□□ -1.11
LINC01397-201ENST00000554808 PIGNO95427 931 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 AP2A1O95782 977 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 MT-CYBP00156 380 aaPredicted RBP8.11□□□□□ -1.11
LINC01397-201ENST00000554808 MMP2P08253 660 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 SP9P0CG40 484 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 TPSB2P20231 275 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 MAGEA6P43360 314 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 KCNJ1P48048 391 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 LMAN1P49257 510 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 ADPRHP54922 357 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 BASP1P80723 227 aaKnown RBP8.11□□□□□ -1.11
LINC01397-201ENST00000554808 SKOR1P84550 965 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 NIPAL4Q0D2K0 466 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 CNTN1Q12860 1018 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 TRAF2Q12933 501 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 ARHGEF7Q14155 803 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 TPSAB1Q15661 275 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 MAP7D1Q3KQU3 841 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 GLE1Q53GS7 698 aaKnown RBP8.11□□□□□ -1.11
LINC01397-201ENST00000554808 PIP5KL1Q5T9C9 394 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 AGBL4Q5VU57 503 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 TTC27Q6P3X3 843 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 KDELC1Q6UW63 502 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 PPP1R21Q6ZMI0 780 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 PARS2Q7L3T8 475 aaKnown RBP8.11□□□□□ -1.11
LINC01397-201ENST00000554808 TTC7BQ86TV6 843 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 PRPF39Q86UA1 669 aaKnown RBP8.11□□□□□ -1.11
LINC01397-201ENST00000554808 HOOK3Q86VS8 718 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 TRIM69Q86WT6 500 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 CAMK1DQ8IU85 385 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 AADATQ8N5Z0 425 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 ZBTB44Q8NCP5 570 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 OR2T34Q8NGX1 318 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 OR6K2Q8NGY2 324 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 FAM174AQ8TBP5 190 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 PDCD6IPQ8WUM4 868 aaKnown RBP8.11□□□□□ -1.11
LINC01397-201ENST00000554808 LRRN4Q8WUT4 740 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 RMDN1Q96DB5 314 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 SCRN2Q96FV2 425 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 LYSMD1Q96S90 227 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 C1QTNF7Q9BXJ2 289 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 FAM129AQ9BZQ8 928 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 CDH19Q9H159 772 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 SEMA4AQ9H3S1 761 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 TRABDQ9H4I3 376 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 ARNT2Q9HBZ2 717 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 MAGEE1Q9HCI5 957 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 RAB6BQ9NRW1 208 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 RAD18Q9NS91 495 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 WSB2Q9NYS7 404 aaPredicted RBP8.11□□□□□ -1.11
LINC01397-201ENST00000554808 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.11□□□□□ -1.11
LINC01397-201ENST00000554808 ASIC3Q9UHC3 531 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 UTP11Q9Y3A2 253 aaKnown RBP8.11□□□□□ -1.11
LINC01397-201ENST00000554808 PCDHB9Q9Y5E1 797 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 PCDHGC4Q9Y5F7 938 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 BPTFQ12830 3046 aa8.11□□□□□ -1.11
LINC01397-201ENST00000554808 WDR87Q6ZQQ6 2873 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 IGHV1OR15-9A0A0B4J2B8 117 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 A0A0J9YYE9 177 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 CAPN8A6NHC0 703 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 PDE2AO00408 941 aaPredicted RBP8.1□□□□□ -1.11
LINC01397-201ENST00000554808 NEMP1O14524 444 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 RIOK3O14730 519 aaKnown RBP8.1□□□□□ -1.11
LINC01397-201ENST00000554808 AREL1O15033 823 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 RNGTTO60942 597 aaKnown RBP8.1□□□□□ -1.11
LINC01397-201ENST00000554808 LILRB5O75023 590 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 PPFIA2O75334 1257 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 PMPCBO75439 489 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 RPP40O75818 363 aaKnown RBP8.1□□□□□ -1.11
LINC01397-201ENST00000554808 RHOBTB1O94844 696 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 SUN1O94901 812 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 SEMA4FO95754 770 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 TRBC1P01850 177 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 APRTP07741 180 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 VIPR1P32241 457 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 RPL22P35268 128 aaKnown RBP8.1□□□□□ -1.11
LINC01397-201ENST00000554808 MMP12P39900 470 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 WNT3AP56704 352 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 RPS21P63220 83 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms