RNA–Protein interactions for RNA: ENST00000553636.1

CCNK-202, Transcript of cyclin K, humanhuman

TSL 2

Gene CCNK, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-202ENST00000553636 ZFYVE27Q5T4F4 411 aa11.7□□□□□ -0.54
CCNK-202ENST00000553636 ZNF548Q8NEK5 533 aaPredicted RBP11.7□□□□□ -0.54
CCNK-202ENST00000553636 OR4C6Q8NH72 309 aa11.7□□□□□ -0.54
CCNK-202ENST00000553636 CENPTQ96BT3 561 aa11.7□□□□□ -0.54
CCNK-202ENST00000553636 IFT43Q96FT9 208 aa11.7□□□□□ -0.54
CCNK-202ENST00000553636 NSMCE3Q96MG7 304 aa11.7□□□□□ -0.54
CCNK-202ENST00000553636 RCOR3Q9P2K3 495 aaPredicted RBP11.7□□□□□ -0.54
CCNK-202ENST00000553636 PCDHGA1Q9Y5H4 931 aa11.7□□□□□ -0.54
CCNK-202ENST00000553636 PEX11BO96011 259 aa11.69□□□□□ -0.54
CCNK-202ENST00000553636 CSF2P04141 144 aa11.69□□□□□ -0.54
CCNK-202ENST00000553636 GIMD1P0DJR0 217 aa11.69□□□□□ -0.54
CCNK-202ENST00000553636 ALPPL2P10696 532 aa11.69□□□□□ -0.54
CCNK-202ENST00000553636 MYF5P13349 255 aa11.69□□□□□ -0.54
CCNK-202ENST00000553636 JUNDP17535 347 aa11.69□□□□□ -0.54
CCNK-202ENST00000553636 CKMT2P17540 419 aa11.69□□□□□ -0.54
CCNK-202ENST00000553636 HSPA9P38646 679 aaKnown RBP11.69□□□□□ -0.54
CCNK-202ENST00000553636 ARSEP51690 589 aa11.69□□□□□ -0.54
CCNK-202ENST00000553636 MAXP61244 160 aa11.69□□□□□ -0.54
CCNK-202ENST00000553636 NSUN2Q08J23 767 aaKnown RBP eCLIP11.69□□□□□ -0.54
CCNK-202ENST00000553636 RALGDSQ12967 914 aa11.69□□□□□ -0.54
CCNK-202ENST00000553636 EIF2B5Q13144 721 aaKnown RBP11.69□□□□□ -0.54
CCNK-202ENST00000553636 ZNF211Q13398 564 aaPredicted RBP11.69□□□□□ -0.54
CCNK-202ENST00000553636 MESDQ14696 234 aa11.69□□□□□ -0.54
CCNK-202ENST00000553636 LRRC14Q15048 493 aa11.69□□□□□ -0.54
CCNK-202ENST00000553636 SMAD1Q15797 465 aaKnown RBP11.69□□□□□ -0.54
CCNK-202ENST00000553636 NCBP2-AS2Q69YL0 99 aa11.69□□□□□ -0.54
CCNK-202ENST00000553636 RBFAQ8N0V3 343 aa11.69□□□□□ -0.54
CCNK-202ENST00000553636 BBS5Q8N3I7 341 aa11.69□□□□□ -0.54
CCNK-202ENST00000553636 PGBD5Q8N414 524 aa11.69□□□□□ -0.54
CCNK-202ENST00000553636 KCTD6Q8NC69 237 aa11.69□□□□□ -0.54
CCNK-202ENST00000553636 PCDH19Q8TAB3 1148 aa11.69□□□□□ -0.54
CCNK-202ENST00000553636 FAM71BQ8TC56 605 aa11.69□□□□□ -0.54
CCNK-202ENST00000553636 PDCD6IPQ8WUM4 868 aaKnown RBP11.69□□□□□ -0.54
CCNK-202ENST00000553636 NSMCE1Q8WV22 266 aa11.69□□□□□ -0.54
CCNK-202ENST00000553636 ECHDC3Q96DC8 303 aa11.69□□□□□ -0.54
CCNK-202ENST00000553636 CCDC42Q96M95 316 aa11.69□□□□□ -0.54
CCNK-202ENST00000553636 NHEJ1Q9H9Q4 299 aaPredicted RBP11.69□□□□□ -0.54
CCNK-202ENST00000553636 SCUBE2Q9NQ36 999 aa11.69□□□□□ -0.54
CCNK-202ENST00000553636 KLF15Q9UIH9 416 aa11.69□□□□□ -0.54
CCNK-202ENST00000553636 LRP4O75096 1905 aa11.68□□□□□ -0.54
CCNK-202ENST00000553636 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.68□□□□□ -0.54
CCNK-202ENST00000553636 NEMP2A6NFY4 417 aa11.68□□□□□ -0.54
CCNK-202ENST00000553636 A8MX80 341 aa11.68□□□□□ -0.54
CCNK-202ENST00000553636 K7ESM1 405 aa11.68□□□□□ -0.54
CCNK-202ENST00000553636 CPP00450 1065 aa11.68□□□□□ -0.54
CCNK-202ENST00000553636 PCCBP05166 539 aa11.68□□□□□ -0.54
CCNK-202ENST00000553636 KRT7P08729 469 aa11.68□□□□□ -0.54
CCNK-202ENST00000553636 C1SP09871 688 aa11.68□□□□□ -0.54
CCNK-202ENST00000553636 ELFN1P0C7U0 828 aa11.68□□□□□ -0.54
CCNK-202ENST00000553636 CR2P20023 1033 aa11.68□□□□□ -0.54
CCNK-202ENST00000553636 MAN1A1P33908 653 aa11.68□□□□□ -0.54
CCNK-202ENST00000553636 MMP13P45452 471 aa11.68□□□□□ -0.54
CCNK-202ENST00000553636 YPEL5P62699 121 aa11.68□□□□□ -0.54
CCNK-202ENST00000553636 PTK2BQ14289 1009 aa11.68□□□□□ -0.54
CCNK-202ENST00000553636 PAFAH1B3Q15102 231 aaKnown RBP11.68□□□□□ -0.54
CCNK-202ENST00000553636 WSCD2Q2TBF2 565 aa11.68□□□□□ -0.54
CCNK-202ENST00000553636 ANKRD20A8PQ5CZ79 823 aa11.68□□□□□ -0.54
CCNK-202ENST00000553636 HES3Q5TGS1 186 aa11.68□□□□□ -0.54
CCNK-202ENST00000553636 MARC1Q5VT66 337 aa11.68□□□□□ -0.54
CCNK-202ENST00000553636 MACC1Q6ZN28 852 aa11.68□□□□□ -0.54
CCNK-202ENST00000553636 CNGA4Q8IV77 575 aa11.68□□□□□ -0.54
CCNK-202ENST00000553636 PHACTR4Q8IZ21 702 aa11.68□□□□□ -0.54
CCNK-202ENST00000553636 SLC35G2Q8TBE7 412 aa11.68□□□□□ -0.54
CCNK-202ENST00000553636 MDM1Q8TC05 714 aa11.68□□□□□ -0.54
CCNK-202ENST00000553636 LMX1AQ8TE12 382 aa11.68□□□□□ -0.54
CCNK-202ENST00000553636 APOLD1Q96LR9 279 aa11.68□□□□□ -0.54
CCNK-202ENST00000553636 NUDCD1Q96RS6 583 aa11.68□□□□□ -0.54
CCNK-202ENST00000553636 MGME1Q9BQP7 344 aa11.68□□□□□ -0.54
CCNK-202ENST00000553636 ZNF670Q9BS34 389 aa11.68□□□□□ -0.54
CCNK-202ENST00000553636 TRIM5Q9C035 493 aa11.68□□□□□ -0.54
CCNK-202ENST00000553636 TCEAL2Q9H3H9 227 aaPredicted RBP11.68□□□□□ -0.54
CCNK-202ENST00000553636 NOD2Q9HC29 1040 aa11.68□□□□□ -0.54
CCNK-202ENST00000553636 NT5MQ9NPB1 228 aa11.68□□□□□ -0.54
CCNK-202ENST00000553636 NLGN3Q9NZ94 848 aa11.68□□□□□ -0.54
CCNK-202ENST00000553636 APOBEC3BQ9UH17 382 aaKnown RBP11.68□□□□□ -0.54
CCNK-202ENST00000553636 LCMT1Q9UIC8 334 aa11.68□□□□□ -0.54
CCNK-202ENST00000553636 PNMA8BQ9ULN7 279 aaPredicted RBP11.68□□□□□ -0.54
CCNK-202ENST00000553636 PCDHGC4Q9Y5F7 938 aa11.68□□□□□ -0.54
CCNK-202ENST00000553636 MYLKQ15746 1914 aa11.68□□□□□ -0.54
CCNK-202ENST00000553636 AKR1B15C9JRZ8 316 aaPredicted RBP11.67□□□□□ -0.54
CCNK-202ENST00000553636 TRAFD1O14545 582 aaPredicted RBP11.67□□□□□ -0.54
CCNK-202ENST00000553636 SCAMP1O15126 338 aa11.67□□□□□ -0.54
CCNK-202ENST00000553636 AQP9O43315 295 aa11.67□□□□□ -0.54
CCNK-202ENST00000553636 SOCS5O75159 536 aa11.67□□□□□ -0.54
CCNK-202ENST00000553636 RECQL5O94762 991 aaPredicted RBP11.67□□□□□ -0.54
CCNK-202ENST00000553636 CDK4P11802 303 aa11.67□□□□□ -0.54
CCNK-202ENST00000553636 JUPP14923 745 aa11.67□□□□□ -0.54
CCNK-202ENST00000553636 ACP1P24666 158 aa11.67□□□□□ -0.54
CCNK-202ENST00000553636 HNF1BP35680 557 aa11.67□□□□□ -0.54
CCNK-202ENST00000553636 GARSP41250 739 aaKnown RBP11.67□□□□□ -0.54
CCNK-202ENST00000553636 POLR2LP62875 67 aaKnown RBP11.67□□□□□ -0.54
CCNK-202ENST00000553636 ITKQ08881 620 aa11.67□□□□□ -0.54
CCNK-202ENST00000553636 GALNT2Q10471 571 aa11.67□□□□□ -0.54
CCNK-202ENST00000553636 TRAF2Q12933 501 aa11.67□□□□□ -0.54
CCNK-202ENST00000553636 ILKQ13418 452 aa11.67□□□□□ -0.54
CCNK-202ENST00000553636 C1orf61Q13536 156 aa11.67□□□□□ -0.54
CCNK-202ENST00000553636 INPP5AQ14642 412 aa11.67□□□□□ -0.54
CCNK-202ENST00000553636 PDK2Q15119 407 aa11.67□□□□□ -0.54
CCNK-202ENST00000553636 TCEA2Q15560 299 aa11.67□□□□□ -0.54
CCNK-202ENST00000553636 DEFB133Q30KQ1 61 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms