RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 FAXCQ5TGI0 409 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 LRRC31Q6UY01 552 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 TMPRSS9Q7Z410 1059 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 TTC7BQ86TV6 843 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 ZSWIM9Q86XI8 627 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 JAMLQ86YT9 394 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 HID1Q8IV36 788 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 TP53INP2Q8IXH6 220 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 PHACTR4Q8IZ21 702 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 SDR16C5Q8N3Y7 309 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 OXR1Q8N573 874 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 PLA2G15Q8NCC3 412 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 ZNF248Q8NDW4 579 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 CCL4L1Q8NHW4 92 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 PCDH19Q8TAB3 1148 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 RXFP2Q8WXD0 754 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 TTC9Q92623 222 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 EXTL1Q92935 676 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 ARHGEF2Q92974 986 aaKnown RBP6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 NT5C3BQ969T7 300 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 CCDC74AQ96AQ1 378 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 C18orf8Q96DM3 657 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 FEM1CQ96JP0 617 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 SMIM14Q96QK8 99 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 PCDHB18PQ96TA0 734 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 IL12RB2Q99665 862 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 CCDC3Q9BQI4 270 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 C11orf70Q9BRQ4 267 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 NOL6Q9H6R4 1146 aaKnown RBP6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 NLRC4Q9NPP4 1024 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 MRPL40Q9NQ50 206 aaKnown RBP6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 ASNSD1Q9NWL6 643 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 OR12D3Q9UGF7 316 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 APOBEC3BQ9UH17 382 aaKnown RBP6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 RWDD2AQ9UIY3 292 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 HOOK1Q9UJC3 728 aaKnown RBP6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 TMEM59LQ9UK28 342 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 NEU3Q9UQ49 428 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 DAAM1Q9Y4D1 1078 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 PTPN13Q12923 2485 aa6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 UBR5O95071 2799 aaPredicted RBP6.93□□□□□ -1.3
PRPF40B-214ENST00000551320 DOCK4Q8N1I0 1966 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 TEX51A0A1B0GUA7 166 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 A0A1W2PQM1 296 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 ILVBLA1L0T0 632 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 TGFBR3LH3BV60 316 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 FPGTO14772 594 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 SLC28A2O43868 658 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 BUB1BO60566 1050 aaPredicted RBP6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 MAGEC1O60732 1142 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 TMCC1O94876 653 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 LRIG2O94898 1065 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 GNA14O95837 355 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 PCCBP05166 539 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 THBS1P07996 1170 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 FAM87AP0C7U9 286 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 ALPPL2P10696 532 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 ADRA1BP35368 520 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 EIF4A3P38919 411 aaKnown RBP6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 RGRP47804 291 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 EIF1AXP47813 144 aaKnown RBP6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 THOP1P52888 689 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 OXCT1P55809 520 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 TMPRSS3P57727 454 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 PFN3P60673 137 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 HNRNPKP61978 463 aaKnown RBP eCLIP6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 NOMO3P69849 1222 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 OVGP1Q12889 678 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 NFATC3Q12968 1075 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 NR0B2Q15466 257 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 TPD52L1Q16890 204 aaPredicted RBP6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 ALG11Q2TAA5 492 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 WSCD2Q2TBF2 565 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 MYLK3Q32MK0 819 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 VWA3BQ502W6 1294 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 BRMS1LQ5PSV4 323 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 KLHDC7AQ5VTJ3 777 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 SCYL2Q6P3W7 929 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 KYAT3Q6YP21 454 aaKnown RBP6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 ARHGAP36Q6ZRI8 547 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 SETD3Q86TU7 594 aaPredicted RBP6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 NLRP14Q86W24 1093 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 PARGQ86W56 976 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 ZFAND4Q86XD8 727 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 TREML1Q86YW5 311 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 TP53I13Q8NBR0 393 aaPredicted RBP6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 TMEM35BQ8NCS4 154 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 PMEPA1Q969W9 287 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 CENPTQ96BT3 561 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 HMCESQ96FZ2 354 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 CELF6Q96J87 481 aaKnown RBP6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 ZNF578Q96N58 590 aaPredicted RBP6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 SLC46A1Q96NT5 459 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 TUBGCP2Q9BSJ2 902 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 TRIM62Q9BVG3 475 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 ZYG11BQ9C0D3 744 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 VPS16Q9H269 839 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 NDST4Q9H3R1 872 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 GPR27Q9NS67 375 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 PADI4Q9UM07 663 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms