RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 PCDH19Q8TAB3 1148 aa13.13□□□□□ -0.31
NPAS3-209ENST00000551008 SPOCK2Q92563 424 aa13.13□□□□□ -0.31
NPAS3-209ENST00000551008 ZNF641Q96N77 438 aaPredicted RBP13.13□□□□□ -0.31
NPAS3-209ENST00000551008 DONSONQ9NYP3 566 aa13.13□□□□□ -0.31
NPAS3-209ENST00000551008 ATP8A1Q9Y2Q0 1164 aa13.13□□□□□ -0.31
NPAS3-209ENST00000551008 ZFC3H1O60293 1989 aaKnown RBP13.12□□□□□ -0.31
NPAS3-209ENST00000551008 TRABD2BA6NFA1 517 aa13.12□□□□□ -0.31
NPAS3-209ENST00000551008 K7ESM1 405 aa13.12□□□□□ -0.31
NPAS3-209ENST00000551008 SCAMP1O15126 338 aa13.12□□□□□ -0.31
NPAS3-209ENST00000551008 CASC3O15234 703 aaKnown RBP13.12□□□□□ -0.31
NPAS3-209ENST00000551008 HTRA2O43464 458 aaPredicted RBP13.12□□□□□ -0.31
NPAS3-209ENST00000551008 GCATO75600 419 aa13.12□□□□□ -0.31
NPAS3-209ENST00000551008 PROSCO94903 275 aa13.12□□□□□ -0.31
NPAS3-209ENST00000551008 CELA2BP08218 269 aaPredicted RBP13.12□□□□□ -0.31
NPAS3-209ENST00000551008 C1SP09871 688 aa13.12□□□□□ -0.31
NPAS3-209ENST00000551008 ARL4AP40617 200 aa13.12□□□□□ -0.31
NPAS3-209ENST00000551008 SUOXP51687 545 aa13.12□□□□□ -0.31
NPAS3-209ENST00000551008 CDH6P55285 790 aa13.12□□□□□ -0.31
NPAS3-209ENST00000551008 INSM1Q01101 510 aaPredicted RBP13.12□□□□□ -0.31
NPAS3-209ENST00000551008 NSUN2Q08J23 767 aaKnown RBP eCLIP13.12□□□□□ -0.314e-6■■■■□ 26.5
NPAS3-209ENST00000551008 GRM3Q14832 879 aa13.12□□□□□ -0.31
NPAS3-209ENST00000551008 PTPRRQ15256 657 aa13.12□□□□□ -0.31
NPAS3-209ENST00000551008 SKOR2Q2VWA4 1001 aaPredicted RBP13.12□□□□□ -0.31
NPAS3-209ENST00000551008 HES3Q5TGS1 186 aa13.12□□□□□ -0.31
NPAS3-209ENST00000551008 NCBP2-AS2Q69YL0 99 aa13.12□□□□□ -0.31
NPAS3-209ENST00000551008 BRAT1Q6PJG6 821 aa13.12□□□□□ -0.31
NPAS3-209ENST00000551008 TMPRSS12Q86WS5 348 aa13.12□□□□□ -0.31
NPAS3-209ENST00000551008 GALNT15Q8N3T1 639 aa13.12□□□□□ -0.31
NPAS3-209ENST00000551008 RNF214Q8ND24 703 aa13.12□□□□□ -0.31
NPAS3-209ENST00000551008 CXorf40AQ8TE69 158 aa13.12□□□□□ -0.31
NPAS3-209ENST00000551008 RFFLQ8WZ73 363 aa13.12□□□□□ -0.31
NPAS3-209ENST00000551008 APOLD1Q96LR9 279 aa13.12□□□□□ -0.31
NPAS3-209ENST00000551008 ZNF599Q96NL3 588 aa13.12□□□□□ -0.31
NPAS3-209ENST00000551008 MGME1Q9BQP7 344 aa13.12□□□□□ -0.31
NPAS3-209ENST00000551008 LRRC61Q9BV99 259 aa13.12□□□□□ -0.31
NPAS3-209ENST00000551008 CINPQ9BW66 212 aaPredicted RBP13.12□□□□□ -0.31
NPAS3-209ENST00000551008 CLPBQ9H078 707 aa13.12□□□□□ -0.31
NPAS3-209ENST00000551008 TSPY26PQ9H489 355 aa13.12□□□□□ -0.31
NPAS3-209ENST00000551008 ATP13A3Q9H7F0 1226 aa13.12□□□□□ -0.31
NPAS3-209ENST00000551008 NLGN3Q9NZ94 848 aa13.12□□□□□ -0.31
NPAS3-209ENST00000551008 DKK4Q9UBT3 224 aa13.12□□□□□ -0.31
NPAS3-209ENST00000551008 SEPT3Q9UH03 358 aa13.12□□□□□ -0.31
NPAS3-209ENST00000551008 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.12□□□□□ -0.31
NPAS3-209ENST00000551008 PTPRQQ9UMZ3 2332 aa13.11□□□□□ -0.31
NPAS3-209ENST00000551008 SSU72P8A0A1W2PR75 194 aa13.11□□□□□ -0.31
NPAS3-209ENST00000551008 MYO1FO00160 1098 aa13.11□□□□□ -0.31
NPAS3-209ENST00000551008 MFAP3LO75121 409 aa13.11□□□□□ -0.31
NPAS3-209ENST00000551008 MAP3K6O95382 1288 aa13.11□□□□□ -0.31
NPAS3-209ENST00000551008 JUNDP17535 347 aa13.11□□□□□ -0.31
NPAS3-209ENST00000551008 SERPINA4P29622 427 aa13.11□□□□□ -0.31
NPAS3-209ENST00000551008 LIG3P49916 1009 aa13.11□□□□□ -0.31
NPAS3-209ENST00000551008 MAXP61244 160 aa13.11□□□□□ -0.31
NPAS3-209ENST00000551008 AP1S1P61966 158 aa13.11□□□□□ -0.31
NPAS3-209ENST00000551008 HNRNPKP61978 463 aaKnown RBP eCLIP13.11□□□□□ -0.31
NPAS3-209ENST00000551008 ELP6Q0PNE2 266 aa13.11□□□□□ -0.31
NPAS3-209ENST00000551008 TRAF2Q12933 501 aa13.11□□□□□ -0.31
NPAS3-209ENST00000551008 TBX2Q13207 712 aaPredicted RBP13.11□□□□□ -0.31
NPAS3-209ENST00000551008 LIPIQ6XZB0 460 aa13.11□□□□□ -0.31
NPAS3-209ENST00000551008 MACC1Q6ZN28 852 aa13.11□□□□□ -0.31
NPAS3-209ENST00000551008 PHACTR4Q8IZ21 702 aa13.11□□□□□ -0.31
NPAS3-209ENST00000551008 PQLC3Q8N755 202 aa13.11□□□□□ -0.31
NPAS3-209ENST00000551008 FAM181AQ8N9Y4 354 aa13.11□□□□□ -0.31
NPAS3-209ENST00000551008 PLA2G15Q8NCC3 412 aa13.11□□□□□ -0.31
NPAS3-209ENST00000551008 OR8K1Q8NGG5 319 aa13.11□□□□□ -0.31
NPAS3-209ENST00000551008 FAF2Q96CS3 445 aa13.11□□□□□ -0.31
NPAS3-209ENST00000551008 SMIM14Q96QK8 99 aa13.11□□□□□ -0.31
NPAS3-209ENST00000551008 NOD2Q9HC29 1040 aa13.11□□□□□ -0.31
NPAS3-209ENST00000551008 ABHD10Q9NUJ1 306 aa13.11□□□□□ -0.31
NPAS3-209ENST00000551008 SPTLC3Q9NUV7 552 aa13.11□□□□□ -0.31
NPAS3-209ENST00000551008 RCOR3Q9P2K3 495 aaPredicted RBP13.11□□□□□ -0.31
NPAS3-209ENST00000551008 PCDHGC4Q9Y5F7 938 aa13.11□□□□□ -0.31
NPAS3-209ENST00000551008 AQP9O43315 295 aa13.1□□□□□ -0.31
NPAS3-209ENST00000551008 CKMT1AP12532 417 aa13.1□□□□□ -0.31
NPAS3-209ENST00000551008 GJC1P36383 396 aa13.1□□□□□ -0.31
NPAS3-209ENST00000551008 SCNN1BP51168 640 aa13.1□□□□□ -0.31
NPAS3-209ENST00000551008 ADKP55263 362 aaKnown RBP13.1□□□□□ -0.31
NPAS3-209ENST00000551008 YPEL5P62699 121 aa13.1□□□□□ -0.31
NPAS3-209ENST00000551008 BCL2L1Q07817 233 aa13.1□□□□□ -0.31
NPAS3-209ENST00000551008 GALNT2Q10471 571 aa13.1□□□□□ -0.31
NPAS3-209ENST00000551008 SLC10A2Q12908 348 aaPredicted RBP13.1□□□□□ -0.31
NPAS3-209ENST00000551008 ILKQ13418 452 aa13.1□□□□□ -0.31
NPAS3-209ENST00000551008 C1orf61Q13536 156 aa13.1□□□□□ -0.31
NPAS3-209ENST00000551008 TRIM14Q14142 442 aa13.1□□□□□ -0.31
NPAS3-209ENST00000551008 PAFAH1B3Q15102 231 aaKnown RBP13.1□□□□□ -0.31
NPAS3-209ENST00000551008 ALG11Q2TAA5 492 aa13.1□□□□□ -0.31
NPAS3-209ENST00000551008 FAM182AQ5T1J6 154 aa13.1□□□□□ -0.31
NPAS3-209ENST00000551008 DPPA4Q7L190 304 aa13.1□□□□□ -0.31
NPAS3-209ENST00000551008 CBARPQ8N350 705 aaPredicted RBP13.1□□□□□ -0.31
NPAS3-209ENST00000551008 TEX26Q8N6G2 289 aa13.1□□□□□ -0.31
NPAS3-209ENST00000551008 LRRN4Q8WUT4 740 aa13.1□□□□□ -0.31
NPAS3-209ENST00000551008 MAML1Q92585 1016 aa13.1□□□□□ -0.31
NPAS3-209ENST00000551008 NUDCD1Q96RS6 583 aa13.1□□□□□ -0.31
NPAS3-209ENST00000551008 CCDC86Q9H6F5 360 aaKnown RBP13.1□□□□□ -0.31
NPAS3-209ENST00000551008 CTTNBP2NLQ9P2B4 639 aa13.1□□□□□ -0.31
NPAS3-209ENST00000551008 UVRAGQ9P2Y5 699 aa13.1□□□□□ -0.31
NPAS3-209ENST00000551008 B4GALT6Q9UBX8 382 aa13.1□□□□□ -0.31
NPAS3-209ENST00000551008 CSNK1G3Q9Y6M4 447 aa13.1□□□□□ -0.31
NPAS3-209ENST00000551008 SCN8AQ9UQD0 1980 aa13.1□□□□□ -0.31
NPAS3-209ENST00000551008 LOC400499M0QZD8 3231 aa13.1□□□□□ -0.31
NPAS3-209ENST00000551008 CACNA1GO43497 2377 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms