RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 CHSY3Q70JA7 882 aa14.75□□□□□ -0.05
HOXC11-202ENST00000546378 CDC26Q8NHZ8 85 aa14.75□□□□□ -0.05
HOXC11-202ENST00000546378 SLC35F5Q8WV83 523 aa14.75□□□□□ -0.05
HOXC11-202ENST00000546378 LRRC39Q96DD0 335 aa14.75□□□□□ -0.05
HOXC11-202ENST00000546378 MARCH7Q9H992 704 aa14.75□□□□□ -0.05
HOXC11-202ENST00000546378 PNMA8BQ9ULN7 279 aaPredicted RBP14.75□□□□□ -0.05
HOXC11-202ENST00000546378 SCN1AP35498 2009 aa14.75□□□□□ -0.05
HOXC11-202ENST00000546378 KNL1Q8NG31 2342 aa14.75□□□□□ -0.05
HOXC11-202ENST00000546378 ZBTB42B2RXF5 422 aa14.75□□□□□ -0.05
HOXC11-202ENST00000546378 GNGT2O14610 69 aa14.75□□□□□ -0.05
HOXC11-202ENST00000546378 KATNA1O75449 491 aa14.75□□□□□ -0.05
HOXC11-202ENST00000546378 OCM2P0CE71 109 aa14.75□□□□□ -0.05
HOXC11-202ENST00000546378 OCMP0CE72 109 aaPredicted RBP14.75□□□□□ -0.05
HOXC11-202ENST00000546378 ZFXP17010 805 aaPredicted RBP14.75□□□□□ -0.05
HOXC11-202ENST00000546378 GABRB3P28472 473 aa14.75□□□□□ -0.05
HOXC11-202ENST00000546378 RP9Q8TA86 221 aaKnown RBP14.75□□□□□ -0.05
HOXC11-202ENST00000546378 DNAJB3Q8WWF6 145 aa14.75□□□□□ -0.05
HOXC11-202ENST00000546378 SMIM14Q96QK8 99 aa14.75□□□□□ -0.05
HOXC11-202ENST00000546378 MLPHQ9BV36 600 aaPredicted RBP14.75□□□□□ -0.05
HOXC11-202ENST00000546378 FRMD8P1Q9BZ68 369 aaPredicted RBP14.75□□□□□ -0.05
HOXC11-202ENST00000546378 NT5MQ9NPB1 228 aa14.75□□□□□ -0.05
HOXC11-202ENST00000546378 RBM22Q9NW64 420 aaKnown RBP eCLIP14.75□□□□□ -0.05
HOXC11-202ENST00000546378 CROTQ9UKG9 612 aa14.75□□□□□ -0.05
HOXC11-202ENST00000546378 SHROOM3Q8TF72 1996 aa14.75□□□□□ -0.05
HOXC11-202ENST00000546378 TCAF2A6NFQ2 919 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 ITGB6P18564 788 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 EIF2B2P49770 351 aaKnown RBP14.74□□□□□ -0.05
HOXC11-202ENST00000546378 COL9A2Q14055 689 aaPredicted RBP14.74□□□□□ -0.05
HOXC11-202ENST00000546378 PLPPR4Q7Z2D5 763 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 PIWIL3Q7Z3Z3 882 aaKnown RBP14.74□□□□□ -0.05
HOXC11-202ENST00000546378 CUZD1Q86UP6 607 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 BEST2Q8NFU1 509 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 CDK15Q96Q40 435 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 EFHD1Q9BUP0 239 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 AP5M1Q9H0R1 490 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 CXorf21Q9HAI6 301 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 ITM2CQ9NQX7 267 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 NDFIP2Q9NV92 336 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 SCHIP1Q9P0W5 487 aaPredicted RBP14.74□□□□□ -0.05
HOXC11-202ENST00000546378 TNFSF13BQ9Y275 285 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 OTOFQ9HC10 1997 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 MOXD2PA6NHM9 499 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 MDM4O15151 490 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 NOBOXO60393 691 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 SH3BGRLO75368 114 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 ATE1O95260 518 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 SLC35E2BP0CK96 405 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 ATP6V1B2P21281 511 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 DUSP28Q4G0W2 176 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 GALNT18Q6P9A2 607 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 TLK2Q86UE8 772 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 CIR1Q86X95 450 aaPredicted RBP14.74□□□□□ -0.05
HOXC11-202ENST00000546378 MIB1Q86YT6 1006 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 HS3ST5Q8IZT8 346 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 ACOX2Q99424 681 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 PNPLA8Q9NP80 782 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 SACM1LQ9NTJ5 587 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 SLAMF8Q9P0V8 285 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 BCAP29Q9UHQ4 241 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 GJD2Q9UKL4 321 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 STAP1Q9ULZ2 295 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 TMCO1Q9UM00 188 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 VPS4AQ9UN37 437 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 MYBPHLA2RUH7 354 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 CYP4B1P13584 511 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 TPSB2P20231 275 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 TPSAB1Q15661 275 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 DPYSL2Q16555 572 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 TIGD2Q4W5G0 525 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 ANKRD34AQ69YU3 496 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 BNIPLQ7Z465 357 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 SETD3Q86TU7 594 aaPredicted RBP14.74□□□□□ -0.05
HOXC11-202ENST00000546378 ABI1Q8IZP0 508 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 PGAM4Q8N0Y7 254 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 SCAMP5Q8TAC9 235 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 PBXIP1Q96AQ6 731 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 SDCCAG3Q96C92 435 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 C3orf30Q96M34 536 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 FZD8Q9H461 694 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 SMOXQ9NWM0 555 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 RAD54BQ9Y620 910 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 CEPT1Q9Y6K0 416 aa14.74□□□□□ -0.05
HOXC11-202ENST00000546378 TRIM38O00635 465 aa14.73□□□□□ -0.05
HOXC11-202ENST00000546378 LRIG2O94898 1065 aa14.73□□□□□ -0.05
HOXC11-202ENST00000546378 H6PDO95479 791 aa14.73□□□□□ -0.05
HOXC11-202ENST00000546378 SNAP29O95721 258 aa14.73□□□□□ -0.05
HOXC11-202ENST00000546378 UGT1A1P22309 533 aa14.73□□□□□ -0.05
HOXC11-202ENST00000546378 UGT1A4P22310 534 aa14.73□□□□□ -0.05
HOXC11-202ENST00000546378 UGT1A3P35503 534 aa14.73□□□□□ -0.05
HOXC11-202ENST00000546378 UGT1A5P35504 534 aa14.73□□□□□ -0.05
HOXC11-202ENST00000546378 HARS2P49590 506 aaKnown RBP14.73□□□□□ -0.05
HOXC11-202ENST00000546378 TRIM25Q14258 630 aaKnown RBP14.73□□□□□ -0.05
HOXC11-202ENST00000546378 GRIK4Q16099 956 aa14.73□□□□□ -0.05
HOXC11-202ENST00000546378 CMPK2Q5EBM0 449 aa14.73□□□□□ -0.05
HOXC11-202ENST00000546378 STK32CQ86UX6 486 aa14.73□□□□□ -0.05
HOXC11-202ENST00000546378 APLFQ8IW19 511 aaPredicted RBP14.73□□□□□ -0.05
HOXC11-202ENST00000546378 ZC3H7AQ8IWR0 971 aaKnown RBP14.73□□□□□ -0.05
HOXC11-202ENST00000546378 PPM1MQ96MI6 270 aa14.73□□□□□ -0.05
HOXC11-202ENST00000546378 ZBTB26Q9HCK0 441 aa14.73□□□□□ -0.05
HOXC11-202ENST00000546378 ZCWPW2A0A1B0GU75 182 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms