RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 PPP3CCP48454 512 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 LIG4P49917 911 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 ZNF132P52740 706 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 PDX1P52945 283 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 NXPH1P58417 271 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 GNG11P61952 73 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 YBX1P67809 324 aaKnown RBP6.86□□□□□ -1.31
CCDC60-205ENST00000546345 IRX1P78414 480 aaPredicted RBP6.86□□□□□ -1.31
CCDC60-205ENST00000546345 MYL7Q01449 175 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 KYAT1Q16773 422 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 SKIDA1Q1XH10 827 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 ZC3H12BQ5HYM0 836 aaKnown RBP6.86□□□□□ -1.31
CCDC60-205ENST00000546345 C3orf38Q5JPI3 329 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 FAM209AQ5JX71 171 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 SNX30Q5VWJ9 437 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 SPECC1LQ69YQ0 1117 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 PAQR3Q6TCH7 311 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 C11orf57Q6ZUT1 292 aaPredicted RBP6.86□□□□□ -1.31
CCDC60-205ENST00000546345 CLEC14AQ86T13 490 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 CTAGE6Q86UF2 777 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 CNGA4Q8IV77 575 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 CTAGE4Q8IX94 777 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 DIS3L2Q8IYB7 885 aaKnown RBP6.86□□□□□ -1.31
CCDC60-205ENST00000546345 LSMEM2Q8N112 164 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 CNPY4Q8N129 248 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 TMEM86AQ8N2M4 240 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 ZNF366Q8N895 744 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 ZSWIM2Q8NEG5 633 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 OR2T3Q8NH03 318 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 HTR3CQ8WXA8 447 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 BICD1Q96G01 975 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 PIWIL1Q96J94 861 aaKnown RBP6.86□□□□□ -1.31
CCDC60-205ENST00000546345 CABS1Q96KC9 395 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 C8orf48Q96LL4 319 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 FIZ1Q96SL8 496 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 MMS19Q96T76 1030 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 SLC38A3Q99624 504 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 SEMA3CQ99985 751 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 BATF3Q9NR55 127 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 GDAP2Q9NXN4 497 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 MARCH2Q9P0N8 246 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 VPS18Q9P253 973 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 KLHL14Q9P2G3 628 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 CLEC4EQ9ULY5 219 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 SH3BP1Q9Y3L3 701 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 NPFFR2Q9Y5X5 522 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 TRPM6Q9BX84 2022 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 TNRC6AQ8NDV7 1962 aaKnown RBP6.86□□□□□ -1.31
CCDC60-205ENST00000546345 NF1P21359 2839 aa6.86□□□□□ -1.31
CCDC60-205ENST00000546345 HRKO00198 91 aa6.85□□□□□ -1.31
CCDC60-205ENST00000546345 YKT6O15498 198 aa6.85□□□□□ -1.31
CCDC60-205ENST00000546345 SDC3O75056 442 aa6.85□□□□□ -1.31
CCDC60-205ENST00000546345 DBHP09172 617 aa6.85□□□□□ -1.31
CCDC60-205ENST00000546345 EPB41P11171 864 aaKnown RBP6.85□□□□□ -1.31
CCDC60-205ENST00000546345 NEFHP12036 1026 aa6.85□□□□□ -1.31
CCDC60-205ENST00000546345 LCP1P13796 627 aa6.85□□□□□ -1.31
CCDC60-205ENST00000546345 PCSK1P29120 753 aa6.85□□□□□ -1.31
CCDC60-205ENST00000546345 SLC8A1P32418 973 aa6.85□□□□□ -1.31
CCDC60-205ENST00000546345 BCL6P41182 706 aa6.85□□□□□ -1.31
CCDC60-205ENST00000546345 PNPLA4P41247 253 aa6.85□□□□□ -1.31
CCDC60-205ENST00000546345 RXRGP48443 463 aa6.85□□□□□ -1.31
CCDC60-205ENST00000546345 TUBP50607 506 aa6.85□□□□□ -1.31
CCDC60-205ENST00000546345 BCAT1P54687 386 aa6.85□□□□□ -1.31
CCDC60-205ENST00000546345 CDH8P55286 799 aa6.85□□□□□ -1.31
CCDC60-205ENST00000546345 C21orf59P57076 290 aa6.85□□□□□ -1.31
CCDC60-205ENST00000546345 RPS14P62263 151 aaKnown RBP6.85□□□□□ -1.31
CCDC60-205ENST00000546345 ASIC1P78348 528 aa6.85□□□□□ -1.31
CCDC60-205ENST00000546345 LSAMPQ13449 338 aa6.85□□□□□ -1.31
CCDC60-205ENST00000546345 CASP8Q14790 479 aa6.85□□□□□ -1.31
CCDC60-205ENST00000546345 CRYMQ14894 314 aa6.85□□□□□ -1.31
CCDC60-205ENST00000546345 CLCA4Q14CN2 919 aa6.85□□□□□ -1.31
CCDC60-205ENST00000546345 ZNF648Q5T619 568 aaPredicted RBP6.85□□□□□ -1.31
CCDC60-205ENST00000546345 FOXB2Q5VYV0 432 aa6.85□□□□□ -1.31
CCDC60-205ENST00000546345 KIAA0895LQ68EN5 471 aa6.85□□□□□ -1.31
CCDC60-205ENST00000546345 C4orf50Q6ZRC1 276 aa6.85□□□□□ -1.31
CCDC60-205ENST00000546345 SYDE1Q6ZW31 735 aaPredicted RBP6.85□□□□□ -1.31
CCDC60-205ENST00000546345 HTR3DQ70Z44 454 aa6.85□□□□□ -1.31
CCDC60-205ENST00000546345 TMTC1Q8IUR5 882 aa6.85□□□□□ -1.31
CCDC60-205ENST00000546345 APLFQ8IW19 511 aaPredicted RBP6.85□□□□□ -1.31
CCDC60-205ENST00000546345 ZC3H3Q8IXZ2 948 aaKnown RBP6.85□□□□□ -1.31
CCDC60-205ENST00000546345 LILRB2Q8N423 598 aa6.85□□□□□ -1.31
CCDC60-205ENST00000546345 C4orf32Q8N8J7 132 aa6.85□□□□□ -1.31
CCDC60-205ENST00000546345 IGSF22Q8N9C0 903 aa6.85□□□□□ -1.31
CCDC60-205ENST00000546345 PLEKHO2Q8TD55 490 aa6.85□□□□□ -1.31
CCDC60-205ENST00000546345 THAP3Q8WTV1 239 aaPredicted RBP6.85□□□□□ -1.31
CCDC60-205ENST00000546345 SLC46A1Q96NT5 459 aa6.85□□□□□ -1.31
CCDC60-205ENST00000546345 SLITRK1Q96PX8 696 aa6.85□□□□□ -1.31
CCDC60-205ENST00000546345 XPO6Q96QU8 1125 aaKnown RBP6.85□□□□□ -1.31
CCDC60-205ENST00000546345 DHRS4Q9BTZ2 278 aa6.85□□□□□ -1.31
CCDC60-205ENST00000546345 ZNF518BQ9C0D4 1074 aa6.85□□□□□ -1.31
CCDC60-205ENST00000546345 TMEM245Q9H330 911 aa6.85□□□□□ -1.31
CCDC60-205ENST00000546345 ZNF768Q9H5H4 540 aaKnown RBP6.85□□□□□ -1.31
CCDC60-205ENST00000546345 ACTR5Q9H9F9 607 aaPredicted RBP6.85□□□□□ -1.31
CCDC60-205ENST00000546345 GPR27Q9NS67 375 aa6.85□□□□□ -1.31
CCDC60-205ENST00000546345 ZNHIT6Q9NWK9 470 aaKnown RBP6.85□□□□□ -1.31
CCDC60-205ENST00000546345 SIRT5Q9NXA8 310 aa6.85□□□□□ -1.31
CCDC60-205ENST00000546345 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.85□□□□□ -1.31
CCDC60-205ENST00000546345 SNX9Q9Y5X1 595 aa6.85□□□□□ -1.31
CCDC60-205ENST00000546345 NAV3Q8IVL0 2385 aa6.84□□□□□ -1.31
CCDC60-205ENST00000546345 FBN3Q75N90 2809 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms