RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 AKAP7Q9P0M2 348 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-220ENST00000544550 MARCH2Q9P0N8 246 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 PISDQ9UG56 409 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 DUSP13Q9UII6 198 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 STOML2Q9UJZ1 356 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 NUDT5Q9UKK9 219 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 LOXL2Q9Y4K0 774 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 NME7Q9Y5B8 376 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 ITIH6Q6UXX5 1313 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 PIEZO2Q9H5I5 2752 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 USP9XQ93008 2570 aaPredicted RBP4.19□□□□□ -1.74
SNHG1-220ENST00000544550 ANAPC1Q9H1A4 1944 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 NBPF19A0A087WUL8 3843 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 PRAMEF33A0A0G2JMD5 474 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 TMEM82A0PJX8 343 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 PMS2P1A4D2B8 440 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 GOLGA8IPA6NC78 632 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 VWA3AA6NCI4 1184 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 GOLGA8JA6NMD2 632 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 EFCAB7A8K855 629 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 D6RAR5 112 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 MUSKO15146 869 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 FGF10O15520 208 aaPredicted RBP4.19□□□□□ -1.74
SNHG1-220ENST00000544550 JAK2O60674 1132 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 PRAMEF10O60809 474 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 NEBLO76041 1014 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 BEST1O76090 585 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 CNTN5O94779 1100 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 CSF2P04141 144 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 PRKCGP05129 697 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 KRT7P08729 469 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 GSTM1P09488 218 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 GAP43P17677 238 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 ENDOUP21128 410 aaKnown RBP4.19□□□□□ -1.74
SNHG1-220ENST00000544550 CD70P32970 193 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 DRD3P35462 400 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 UBA7P41226 1012 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 CSKP41240 450 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 RABIFP47224 123 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 MASP1P48740 699 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 KIF11P52732 1056 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 COPB1P53618 953 aaKnown RBP4.19□□□□□ -1.74
SNHG1-220ENST00000544550 HMGN5P82970 282 aaKnown RBP4.19□□□□□ -1.74
SNHG1-220ENST00000544550 GUCY1B3Q02153 619 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 TEKQ02763 1124 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 IL17AQ16552 155 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 C21orf62-AS1Q17RA5 79 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 POM121L1PQ3SYA9 428 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 TM4SF20Q53R12 229 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 RILPL1Q5EBL4 403 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 ZNF667Q5HYK9 610 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 RNF187Q5TA31 235 aaPredicted RBP4.19□□□□□ -1.74
SNHG1-220ENST00000544550 ARL6IP4Q66PJ3 421 aaKnown RBP4.19□□□□□ -1.74
SNHG1-220ENST00000544550 CRTC1Q6UUV9 634 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 KYAT3Q6YP21 454 aaKnown RBP4.19□□□□□ -1.74
SNHG1-220ENST00000544550 CLEC20AQ6ZU45 233 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 TIPARPQ7Z3E1 657 aaKnown RBP4.19□□□□□ -1.74
SNHG1-220ENST00000544550 ZSCAN30Q86W11 494 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 UNC93AQ86WB7 457 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 SFR1Q86XK3 245 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 CREG2Q8IUH2 290 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 SRRM1Q8IYB3 904 aaKnown RBP4.19□□□□□ -1.74
SNHG1-220ENST00000544550 CRYBG2Q8N1P7 616 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 NECAB1Q8N987 351 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 FBXO18Q8NFZ0 1043 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 FIBINQ8TAL6 211 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 APOBEC4Q8WW27 367 aaKnown RBP4.19□□□□□ -1.74
SNHG1-220ENST00000544550 OR8D1Q8WZ84 308 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 LARP4BQ92615 738 aaKnown RBP4.19□□□□□ -1.74
SNHG1-220ENST00000544550 RAD54LQ92698 747 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 PTPRN2Q92932 1015 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 TBATAQ96M53 351 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 DDX50Q9BQ39 737 aaKnown RBP4.19□□□□□ -1.74
SNHG1-220ENST00000544550 CBWD1Q9BRT8 395 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 EFHD1Q9BUP0 239 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 BOCQ9BWV1 1114 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 STRA6Q9BX79 667 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 CDH19Q9H159 772 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 PCIF1Q9H4Z3 704 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 NMUR1Q9HB89 426 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 TRIM39Q9HCM9 518 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 PRDM8Q9NQV8 689 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 ZNF71Q9NQZ8 489 aaPredicted RBP4.19□□□□□ -1.74
SNHG1-220ENST00000544550 OLFML3Q9NRN5 406 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 DONSONQ9NYP3 566 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 SPASTQ9UBP0 616 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 ERVW-1Q9UQF0 538 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 HBS1LQ9Y450 684 aaKnown RBP4.19□□□□□ -1.74
SNHG1-220ENST00000544550 CEP83Q9Y592 693 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 NPFFR2Q9Y5X5 522 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 HS3ST3A1Q9Y663 406 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 TMEM131Q92545 1883 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 PTPN13Q12923 2485 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 ATMQ13315 3056 aa4.19□□□□□ -1.74
SNHG1-220ENST00000544550 TEX15Q9BXT5 2789 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 SPTY2D1-AS1A0A0U1RR47 76 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 SSU72P8A0A1W2PR75 194 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 HHLA1C9JL84 531 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 ALOX15BO15296 676 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 SLC31A1O15431 190 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms