RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 CCR10P46092 362 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 NPY4RP50391 375 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 SCNN1GP51170 649 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 CSE1LP55060 971 aaKnown RBP4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 FAM189BP81408 668 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 MRPS5P82675 430 aaKnown RBP4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 GRAPQ13588 217 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 IL11RAQ14626 422 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 HIST2H2ACQ16777 129 aaPredicted RBP4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 LETM2Q2VYF4 491 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 IGSF11Q5DX21 431 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 ARL13AQ5H913 290 aaPredicted RBP4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 MPP7Q5T2T1 576 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 KRT79Q5XKE5 535 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 CNSTQ6PJW8 725 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 KIRREL2Q6UWL6 708 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 GLB1LQ6UWU2 654 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 CFAP77Q6ZQR2 320 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 CATSPER4Q7RTX7 472 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 MDGA2Q7Z553 956 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 LMNTD2Q8IXW0 634 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 MMP21Q8N119 569 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 C10orf53Q8N6V4 93 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 XXYLT1Q8NBI6 393 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 MCUQ8NE86 351 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 GDPD5Q8WTR4 605 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 NSMCE1Q8WV22 266 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 SGCDQ92629 289 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 PABPC5Q96DU9 382 aaKnown RBP4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 CCDC114Q96M63 670 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 SORCS2Q96PQ0 1159 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 OR2A14Q96R47 310 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 GAD1Q99259 594 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 PI4K2AQ9BTU6 479 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 ABHD14AQ9BUJ0 271 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 ACAT2Q9BWD1 397 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 ADGRE3Q9BY15 652 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 FUT8Q9BYC5 575 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 FAM129AQ9BZQ8 928 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 TRIM2Q9C040 744 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 MMADHCQ9H3L0 296 aaPredicted RBP4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 Q9N2J8 555 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 AKIP1Q9NQ31 210 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 MBNL1Q9NR56 388 aaKnown RBP4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 PSD3Q9NYI0 1048 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 NLKQ9UBE8 527 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 CNOT8Q9UFF9 292 aaKnown RBP4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 TMCC3Q9ULS5 477 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 AAR2Q9Y312 384 aaKnown RBP4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 CLDN16Q9Y5I7 305 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 ZNF142P52746 1687 aaPredicted RBP4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 MYO3AQ8NEV4 1616 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 RNF17Q9BXT8 1623 aaKnown RBP4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 ALKQ9UM73 1620 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 DIP2CQ9Y2E4 1556 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 XDHP47989 1333 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 ZNF644Q9H582 1327 aaPredicted RBP4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 LOC102723996A0A087X1L8 192 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 TMEM247A6NEH6 219 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 LRRC72A6NJI9 287 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 PSMD14O00487 310 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 PROM1O43490 865 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 STX6O43752 255 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 EXOC3O60645 756 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 SLC22A3O75751 556 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 NKX2-2O95096 273 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 HLA-DQA2P01906 255 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 TFP02787 698 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 TPOP07202 933 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 ADH4P08319 380 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 RFPL3SP0C7P2 107 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 FCGR2AP12318 317 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 IL7RP16871 459 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 ERCC2P18074 760 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 HLA-DPA1P20036 260 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 TGM2P21980 687 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 SP100P23497 879 aaPredicted RBP4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 DDX6P26196 483 aaKnown RBP eCLIP4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 MC5RP33032 325 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 VPS41P49754 854 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 CCR3P51677 355 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 CFHR3Q02985 330 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 YWHAHQ04917 246 aaPredicted RBP4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 SCN1BQ07699 218 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 ACSM2AQ08AH3 577 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 COASYQ13057 564 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 CRHR2Q13324 411 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 BMPR2Q13873 1038 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 KCNB1Q14721 858 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 TNIP1Q15025 636 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 COL28A1Q2UY09 1125 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 PCGF3Q3KNV8 242 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 GLE1Q53GS7 698 aaKnown RBP4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 CXorf66Q5JRM2 361 aaPredicted RBP4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 ACSM2BQ68CK6 577 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 RBPMS2Q6ZRY4 209 aaKnown RBP4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 ERN2Q76MJ5 926 aaKnown RBP4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 TDRPQ86YL5 185 aa4.05□□□□□ -1.76
SFSWAP-211ENST00000542813 SFTPA1Q8IWL2 248 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms