RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 YES1P07947 543 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 ADORA2BP29275 332 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 YWHAZP63104 245 aaKnown RBP11.14□□□□□ -0.63
PBX1-212ENST00000540236 KBTBD6Q86V97 674 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 ERO1BQ86YB8 467 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 ZNF285Q96NJ3 590 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 NODALQ96S42 347 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 C1orf21Q9H246 121 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 ZBTB20Q9HC78 741 aaPredicted RBP11.14□□□□□ -0.63
PBX1-212ENST00000540236 RBAKQ9NYW8 714 aaPredicted RBP11.14□□□□□ -0.63
PBX1-212ENST00000540236 ZNF624Q9P2J8 865 aaPredicted RBP11.14□□□□□ -0.63
PBX1-212ENST00000540236 UBA6A0AVT1 1052 aaPredicted RBP11.14□□□□□ -0.63
PBX1-212ENST00000540236 EML1O00423 815 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 CNPP09543 421 aaKnown RBP11.14□□□□□ -0.63
PBX1-212ENST00000540236 RPS3P23396 243 aaKnown RBP eCLIP11.14□□□□□ -0.63
PBX1-212ENST00000540236 DDR2Q16832 855 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 ZNF720Q7Z2F6 126 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 TMEM8AQ9HCN3 771 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 RANGRFQ9HD47 186 aaPredicted RBP11.14□□□□□ -0.63
PBX1-212ENST00000540236 PCDHB2Q9Y5E7 798 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 CCDC154A6NI56 674 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 KELP23276 732 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 TGFBR1P36897 503 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 TSTA3Q13630 321 aaPredicted RBP11.14□□□□□ -0.63
PBX1-212ENST00000540236 MED22Q15528 200 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 DNAJB7Q7Z6W7 309 aaPredicted RBP11.14□□□□□ -0.63
PBX1-212ENST00000540236 MICALL2Q8IY33 904 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 ITCHQ96J02 903 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 APOL4Q9BPW4 351 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 NARFLQ9H6Q4 476 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 SMURF2Q9HAU4 748 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 RNF11Q9Y3C5 154 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 HEG1Q9ULI3 1381 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 TK2O00142 265 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 KMOO15229 486 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 SLITRK3O94933 977 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 LTKP29376 864 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 CASP7P55210 303 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 SIGIRRQ6IA17 410 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 GHDCQ8N2G8 530 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 ITPKCQ96DU7 683 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 SETDB2Q96T68 719 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 FAM105AQ9NUU6 356 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 TBC1D13Q9NVG8 400 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 PXDNQ92626 1479 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 KLHL18O94889 574 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 CCNYL3P0C7X3 344 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 GRIA1P42261 906 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 CXCR3P49682 368 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 DENND1BQ6P3S1 775 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 MILR1Q7Z6M3 343 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 ZNF366Q8N895 744 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 COLGALT1Q8NBJ5 622 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 OR9I1Q8NGQ6 314 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 NSMCE2Q96MF7 247 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 TARS2Q9BW92 718 aaKnown RBP11.14□□□□□ -0.63
PBX1-212ENST00000540236 TIGARQ9NQ88 270 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 NDFIP2Q9NV92 336 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 ING3Q9NXR8 418 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 NUFIP1Q9UHK0 495 aaKnown RBP11.14□□□□□ -0.63
PBX1-212ENST00000540236 PPIEQ9UNP9 301 aaKnown RBP11.14□□□□□ -0.63
PBX1-212ENST00000540236 BTBD19C9JJ37 291 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 AIREO43918 545 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 SULT1C4O75897 302 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 CD36P16671 472 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 RPS3AP61247 264 aaKnown RBP11.13□□□□□ -0.63
PBX1-212ENST00000540236 DOK7Q18PE1 504 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 CYB5RLQ6IPT4 315 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 INTS5Q6P9B9 1019 aaKnown RBP11.13□□□□□ -0.63
PBX1-212ENST00000540236 DPY19L3Q6ZPD9 716 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 TDRPQ86YL5 185 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 RASSF5Q8WWW0 418 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 SLC2A11Q9BYW1 496 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 EIF3KQ9UBQ5 218 aaKnown RBP11.13□□□□□ -0.63
PBX1-212ENST00000540236 C4AP0C0L4 1744 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 C4BP0C0L5 1744 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 PABPN1LA6NDY0 278 aaKnown RBP11.13□□□□□ -0.63
PBX1-212ENST00000540236 TGFB1I1O43294 461 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 CBLP22681 906 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 MRPS5P82675 430 aaKnown RBP11.13□□□□□ -0.63
PBX1-212ENST00000540236 NFE2L1Q14494 772 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 FAM98BQ52LJ0 330 aaKnown RBP11.13□□□□□ -0.63
PBX1-212ENST00000540236 MINDY2Q8NBR6 621 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 SLC22A8Q8TCC7 542 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 NACC2Q96BF6 587 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 KIAA1522Q9P206 1035 aaPredicted RBP11.13□□□□□ -0.63
PBX1-212ENST00000540236 TCEA3O75764 348 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 PDE9AO76083 593 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 METTL18O95568 372 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 TSPAN19P0C672 248 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 IL7P13232 177 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 SIX1Q15475 284 aaPredicted RBP11.13□□□□□ -0.63
PBX1-212ENST00000540236 ARHGEF16Q5VV41 709 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 LDHDQ86WU2 507 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 SLC45A3Q96JT2 553 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 FKBP14Q9NWM8 211 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 EIF3DO15371 548 aaKnown RBP eCLIP11.13□□□□□ -0.63
PBX1-212ENST00000540236 PAPSS1O43252 624 aaPredicted RBP11.13□□□□□ -0.63
PBX1-212ENST00000540236 NDUFB10O96000 172 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 OLIG2Q13516 323 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms