RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 MZT2BQ6NZ67 158 aa6.86□□□□□ -1.31
TRAV11-201ENST00000539512 LCTLQ6UWM7 567 aa6.86□□□□□ -1.31
TRAV11-201ENST00000539512 SF3B5Q9BWJ5 86 aaKnown RBP6.86□□□□□ -1.31
TRAV11-201ENST00000539512 KIF9Q9HAQ2 790 aa6.86□□□□□ -1.31
TRAV11-201ENST00000539512 MAGEE1Q9HCI5 957 aa6.86□□□□□ -1.31
TRAV11-201ENST00000539512 DLGAP2Q9P1A6 1054 aa6.86□□□□□ -1.31
TRAV11-201ENST00000539512 INTS6Q9UL03 887 aaKnown RBP6.86□□□□□ -1.31
TRAV11-201ENST00000539512 FZD10Q9ULW2 581 aa6.86□□□□□ -1.31
TRAV11-201ENST00000539512 CAPN7Q9Y6W3 813 aa6.86□□□□□ -1.31
TRAV11-201ENST00000539512 PIAS3Q9Y6X2 628 aa6.86□□□□□ -1.31
TRAV11-201ENST00000539512 NPIPB11E5RHQ5 1161 aa6.85□□□□□ -1.31
TRAV11-201ENST00000539512 GTPBP1O00178 669 aaKnown RBP6.85□□□□□ -1.31
TRAV11-201ENST00000539512 NDUFB4O95168 129 aa6.85□□□□□ -1.31
TRAV11-201ENST00000539512 IPO7O95373 1038 aaKnown RBP6.85□□□□□ -1.31
TRAV11-201ENST00000539512 CRYABP02511 175 aaKnown RBP6.85□□□□□ -1.31
TRAV11-201ENST00000539512 LAMP2P13473 410 aa6.85□□□□□ -1.31
TRAV11-201ENST00000539512 NR4A2P43354 598 aa6.85□□□□□ -1.31
TRAV11-201ENST00000539512 NEDD9Q14511 834 aa6.85□□□□□ -1.31
TRAV11-201ENST00000539512 MED22Q15528 200 aa6.85□□□□□ -1.31
TRAV11-201ENST00000539512 DAB2IPQ5VWQ8 1189 aa6.85□□□□□ -1.31
TRAV11-201ENST00000539512 TMEM154Q6P9G4 183 aa6.85□□□□□ -1.31
TRAV11-201ENST00000539512 TMEM116Q8NCL8 245 aa6.85□□□□□ -1.31
TRAV11-201ENST00000539512 FCRL4Q96PJ5 515 aa6.85□□□□□ -1.31
TRAV11-201ENST00000539512 BARD1Q99728 777 aaKnown RBP6.85□□□□□ -1.31
TRAV11-201ENST00000539512 SH2D4AQ9H788 454 aa6.85□□□□□ -1.31
TRAV11-201ENST00000539512 FBRSL1Q9HCM7 1045 aaKnown RBP6.85□□□□□ -1.31
TRAV11-201ENST00000539512 RRP7BPQ9NSQ0 103 aa6.85□□□□□ -1.31
TRAV11-201ENST00000539512 TMEM51Q9NW97 253 aa6.85□□□□□ -1.31
TRAV11-201ENST00000539512 IL36RNQ9UBH0 155 aa6.85□□□□□ -1.31
TRAV11-201ENST00000539512 LSM4Q9Y4Z0 139 aaKnown RBP6.85□□□□□ -1.31
TRAV11-201ENST00000539512 LYVE1Q9Y5Y7 322 aa6.85□□□□□ -1.31
TRAV11-201ENST00000539512 A0A0U1RQF3 1178 aa6.84□□□□□ -1.31
TRAV11-201ENST00000539512 FAM237BA0A1B0GVD1 139 aa6.84□□□□□ -1.31
TRAV11-201ENST00000539512 OVOL3O00110 214 aa6.84□□□□□ -1.31
TRAV11-201ENST00000539512 BMP15O95972 392 aa6.84□□□□□ -1.31
TRAV11-201ENST00000539512 NAGAP17050 411 aa6.84□□□□□ -1.31
TRAV11-201ENST00000539512 CHATP28329 748 aa6.84□□□□□ -1.31
TRAV11-201ENST00000539512 ICAM3P32942 547 aa6.84□□□□□ -1.31
TRAV11-201ENST00000539512 PBX3P40426 434 aa6.84□□□□□ -1.31
TRAV11-201ENST00000539512 DRAP1Q14919 205 aaPredicted RBP6.84□□□□□ -1.31
TRAV11-201ENST00000539512 SOWAHAQ2M3V2 549 aa6.84□□□□□ -1.31
TRAV11-201ENST00000539512 SNX30Q5VWJ9 437 aa6.84□□□□□ -1.31
TRAV11-201ENST00000539512 IKBIPQ70UQ0 350 aa6.84□□□□□ -1.31
TRAV11-201ENST00000539512 ZNF367Q7RTV3 350 aa6.84□□□□□ -1.31
TRAV11-201ENST00000539512 SCCPDHQ8NBX0 429 aa6.84□□□□□ -1.31
TRAV11-201ENST00000539512 BEST2Q8NFU1 509 aa6.84□□□□□ -1.31
TRAV11-201ENST00000539512 VOPP1Q96AW1 172 aa6.84□□□□□ -1.31
TRAV11-201ENST00000539512 PABPC5Q96DU9 382 aaKnown RBP6.84□□□□□ -1.31
TRAV11-201ENST00000539512 MAP7D2Q96T17 732 aa6.84□□□□□ -1.31
TRAV11-201ENST00000539512 TREX2Q9BQ50 279 aaPredicted RBP6.84□□□□□ -1.31
TRAV11-201ENST00000539512 SDF4Q9BRK5 362 aa6.84□□□□□ -1.31
TRAV11-201ENST00000539512 C1QTNF7Q9BXJ2 289 aa6.84□□□□□ -1.31
TRAV11-201ENST00000539512 PLAC1Q9HBJ0 212 aa6.84□□□□□ -1.31
TRAV11-201ENST00000539512 MAP3K20Q9NYL2 800 aaKnown RBP6.84□□□□□ -1.31
TRAV11-201ENST00000539512 CISD1Q9NZ45 108 aaKnown RBP6.84□□□□□ -1.31
TRAV11-201ENST00000539512 A0A1W2PRG0 241 aa6.83□□□□□ -1.32
TRAV11-201ENST00000539512 TGFB1I1O43294 461 aa6.83□□□□□ -1.32
TRAV11-201ENST00000539512 LDB2O43679 373 aa6.83□□□□□ -1.32
TRAV11-201ENST00000539512 TNFRSF1BP20333 461 aa6.83□□□□□ -1.32
TRAV11-201ENST00000539512 SORDQ00796 357 aa6.83□□□□□ -1.32
TRAV11-201ENST00000539512 ROR2Q01974 943 aaKnown RBP6.83□□□□□ -1.32
TRAV11-201ENST00000539512 CSTF3Q12996 717 aaKnown RBP6.83□□□□□ -1.32
TRAV11-201ENST00000539512 GRIK3Q13003 919 aa6.83□□□□□ -1.32
TRAV11-201ENST00000539512 FGFBP1Q14512 234 aa6.83□□□□□ -1.32
TRAV11-201ENST00000539512 FNBP1LQ5T0N5 605 aa6.83□□□□□ -1.32
TRAV11-201ENST00000539512 GPATCH4Q5T3I0 446 aaKnown RBP6.83□□□□□ -1.32
TRAV11-201ENST00000539512 ZNF425Q6IV72 752 aa6.83□□□□□ -1.32
TRAV11-201ENST00000539512 NEK10Q6ZWH5 1172 aa6.83□□□□□ -1.32
TRAV11-201ENST00000539512 PSPC1Q8WXF1 523 aaKnown RBP6.83□□□□□ -1.32
TRAV11-201ENST00000539512 ARHGEF2Q92974 986 aaKnown RBP6.83□□□□□ -1.32
TRAV11-201ENST00000539512 NCAPGQ9BPX3 1015 aa6.83□□□□□ -1.32
TRAV11-201ENST00000539512 MSTO1Q9BUK6 570 aa6.83□□□□□ -1.32
TRAV11-201ENST00000539512 FTOQ9C0B1 505 aaKnown RBP eCLIP6.83□□□□□ -1.32
TRAV11-201ENST00000539512 MUC13Q9H3R2 512 aa6.83□□□□□ -1.32
TRAV11-201ENST00000539512 SYNCQ9H7C4 482 aa6.83□□□□□ -1.32
TRAV11-201ENST00000539512 KAT14Q9H8E8 782 aa6.83□□□□□ -1.32
TRAV11-201ENST00000539512 HCFC1R1Q9NWW0 138 aa6.83□□□□□ -1.32
TRAV11-201ENST00000539512 CORO1CQ9ULV4 474 aaPredicted RBP6.83□□□□□ -1.32
TRAV11-201ENST00000539512 ERVK-11Q9UQG0 969 aa6.83□□□□□ -1.32
TRAV11-201ENST00000539512 LIPT2A6NK58 231 aa6.82□□□□□ -1.32
TRAV11-201ENST00000539512 OR6C75A6NL08 312 aa6.82□□□□□ -1.32
TRAV11-201ENST00000539512 AKR1B15C9JRZ8 316 aaPredicted RBP6.82□□□□□ -1.32
TRAV11-201ENST00000539512 TNFRSF13BO14836 293 aaPredicted RBP6.82□□□□□ -1.32
TRAV11-201ENST00000539512 SPRY3O43610 288 aa6.82□□□□□ -1.32
TRAV11-201ENST00000539512 EIF2S1P05198 315 aaKnown RBP6.82□□□□□ -1.32
TRAV11-201ENST00000539512 MMP2P08253 660 aa6.82□□□□□ -1.32
TRAV11-201ENST00000539512 CDH2P19022 906 aaPredicted RBP6.82□□□□□ -1.32
TRAV11-201ENST00000539512 ITGAXP20702 1163 aa6.82□□□□□ -1.32
TRAV11-201ENST00000539512 GPTP24298 496 aa6.82□□□□□ -1.32
TRAV11-201ENST00000539512 THPOP40225 353 aa6.82□□□□□ -1.32
TRAV11-201ENST00000539512 MLH1P40692 756 aa6.82□□□□□ -1.32
TRAV11-201ENST00000539512 PIP4K2AP48426 406 aaPredicted RBP6.82□□□□□ -1.32
TRAV11-201ENST00000539512 CXCR3P49682 368 aa6.82□□□□□ -1.32
TRAV11-201ENST00000539512 DRG2P55039 364 aaKnown RBP6.82□□□□□ -1.32
TRAV11-201ENST00000539512 PRAMEP78395 509 aa6.82□□□□□ -1.32
TRAV11-201ENST00000539512 OLIG2Q13516 323 aa6.82□□□□□ -1.32
TRAV11-201ENST00000539512 CRYMQ14894 314 aa6.82□□□□□ -1.32
TRAV11-201ENST00000539512 COL28A1Q2UY09 1125 aa6.82□□□□□ -1.32
TRAV11-201ENST00000539512 SLC45A4Q5BKX6 768 aa6.82□□□□□ -1.32
TRAV11-201ENST00000539512 TTI2Q6NXR4 508 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms