RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 POLR2LP62875 67 aaKnown RBP7.29□□□□□ -1.24
MSH6-209ENST00000538136 NKX3-2P78367 333 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 CLDN10P78369 228 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 PDE1CQ14123 709 aaPredicted RBP7.29□□□□□ -1.24
MSH6-209ENST00000538136 ZNF470Q6ECI4 717 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 TIGD7Q6NT04 549 aaPredicted RBP7.29□□□□□ -1.24
MSH6-209ENST00000538136 CENPUQ71F23 418 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 PARGQ86W56 976 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 RASSF3Q86WH2 238 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 FAM129CQ86XR2 697 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 BEND7Q8N7W2 519 aaPredicted RBP7.29□□□□□ -1.24
MSH6-209ENST00000538136 FBXO25Q8TCJ0 367 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 MYO19Q96H55 970 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 PCDH9Q9HC56 1237 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 CHRAC1Q9NRG0 131 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 SLC17A6Q9P2U8 582 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 TMEM59LQ9UK28 342 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 CLCA2Q9UQC9 943 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 TDRD6O60522 2096 aaKnown RBP7.29□□□□□ -1.24
MSH6-209ENST00000538136 MDC1Q14676 2089 aaKnown RBP7.29□□□□□ -1.24
MSH6-209ENST00000538136 ATG13O75143 517 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 RPP40O75818 363 aaKnown RBP7.29□□□□□ -1.24
MSH6-209ENST00000538136 ANXA9O76027 345 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 SRP72O76094 671 aaKnown RBP7.29□□□□□ -1.24
MSH6-209ENST00000538136 POP4O95707 220 aaKnown RBP7.29□□□□□ -1.24
MSH6-209ENST00000538136 PRNPP04156 253 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 MCM3P25205 808 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 ARHGAP25P42331 645 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 ARL4CP56559 192 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 LMNB2Q03252 620 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 LRRC32Q14392 662 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 CST6Q15828 149 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 CARD16Q5EG05 197 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 LYSMD3Q7Z3D4 306 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 SUV39H2Q9H5I1 410 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 ZFYVE1Q9HBF4 777 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 FBXO6Q9NRD1 293 aaPredicted RBP7.29□□□□□ -1.24
MSH6-209ENST00000538136 B4GALT6Q9UBX8 382 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 ZNF510Q9Y2H8 683 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 PCDHA3Q9Y5H8 950 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 DIDO1Q9BTC0 2240 aaKnown RBP7.29□□□□□ -1.24
MSH6-209ENST00000538136 hCG_1818297A0A087WSY0 165 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 GSAPA4D1B5 854 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 CFAP99D6REC4 459 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 SPAG7O75391 227 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 OAS1P00973 400 aaKnown RBP7.29□□□□□ -1.24
MSH6-209ENST00000538136 BMP1P13497 986 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 EPB42P16452 691 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 PRKCHP24723 683 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 HOXD9P28356 352 aaPredicted RBP7.29□□□□□ -1.24
MSH6-209ENST00000538136 SOX11P35716 441 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 MSH2P43246 934 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 GEMIN4P57678 1058 aaKnown RBP7.29□□□□□ -1.24
MSH6-209ENST00000538136 NFATC2Q13469 925 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 USP10Q14694 798 aaKnown RBP7.29□□□□□ -1.24
MSH6-209ENST00000538136 ZNF776Q68DI1 518 aaPredicted RBP7.29□□□□□ -1.24
MSH6-209ENST00000538136 NAPEPLDQ6IQ20 393 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 ARMC6Q6NXE6 501 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 OTOAQ7RTW8 1153 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 CYP2U1Q7Z449 544 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 UNC5BQ8IZJ1 945 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 ZNF567Q8N184 647 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 CXorf38Q8TB03 319 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 HDAC11Q96DB2 347 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 CLIP3Q96DZ5 547 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 MFSD3Q96ES6 412 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 MED8Q96G25 268 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 RIOK2Q9BVS4 552 aaKnown RBP7.29□□□□□ -1.24
MSH6-209ENST00000538136 SOHLH2Q9NX45 425 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 ARHGEF38Q9NXL2 777 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 IRAK3Q9Y616 596 aa7.29□□□□□ -1.24
MSH6-209ENST00000538136 PFDN6O15212 129 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 FGF10O15520 208 aaPredicted RBP7.28□□□□□ -1.24
MSH6-209ENST00000538136 PJA2O43164 708 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 PSTPIP1O43586 416 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 PRSS56P0CW18 603 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 ZNF8P17098 575 aaPredicted RBP7.28□□□□□ -1.24
MSH6-209ENST00000538136 ITPKAP23677 461 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 TYK2P29597 1187 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 RPL22P35268 128 aaKnown RBP7.28□□□□□ -1.24
MSH6-209ENST00000538136 GARSP41250 739 aaKnown RBP7.28□□□□□ -1.24
MSH6-209ENST00000538136 ZNF252P-AS1Q0IIN9 211 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 ZBTB17Q13105 803 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 PDAP1Q13442 181 aaKnown RBP7.28□□□□□ -1.24
MSH6-209ENST00000538136 ZKSCAN8Q15776 578 aaPredicted RBP7.28□□□□□ -1.24
MSH6-209ENST00000538136 SMAD2Q15796 467 aaKnown RBP7.28□□□□□ -1.24
MSH6-209ENST00000538136 GDPD4Q6W3E5 623 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 SYTL1Q8IYJ3 562 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 SP7Q8TDD2 431 aaPredicted RBP7.28□□□□□ -1.24
MSH6-209ENST00000538136 ESAMQ96AP7 390 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 SKA1Q96BD8 255 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 LENG8Q96PV6 779 aaPredicted RBP7.28□□□□□ -1.24
MSH6-209ENST00000538136 HGH1Q9BTY7 390 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 CLPBQ9H078 707 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 MRPL40Q9NQ50 206 aaKnown RBP7.28□□□□□ -1.24
MSH6-209ENST00000538136 HPS4Q9NQG7 708 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 GGT7Q9UJ14 662 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 ZNF462Q96JM2 2506 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 KRBA1A5PL33 1030 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 C16orf96A6NNT2 1141 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms