RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 C7orf26Q96N11 449 aa10.83□□□□□ -0.68
CLIP1-210ENST00000538120 TTC1Q99614 292 aa10.83□□□□□ -0.68
CLIP1-210ENST00000538120 THTPAQ9BU02 230 aa10.83□□□□□ -0.68
CLIP1-210ENST00000538120 MMADHCQ9H3L0 296 aaPredicted RBP10.83□□□□□ -0.68
CLIP1-210ENST00000538120 SP110Q9HB58 689 aa10.83□□□□□ -0.68
CLIP1-210ENST00000538120 TMEM39AQ9NV64 488 aa10.83□□□□□ -0.68
CLIP1-210ENST00000538120 GJB3O75712 270 aa10.83□□□□□ -0.68
CLIP1-210ENST00000538120 KLKB1P03952 638 aa10.83□□□□□ -0.68
CLIP1-210ENST00000538120 NAT1P18440 290 aa10.83□□□□□ -0.68
CLIP1-210ENST00000538120 OR1E1P30953 314 aa10.83□□□□□ -0.68
CLIP1-210ENST00000538120 CD86P42081 329 aa10.83□□□□□ -0.68
CLIP1-210ENST00000538120 MAPKAPK2P49137 400 aa10.83□□□□□ -0.68
CLIP1-210ENST00000538120 SERPINB8P50452 374 aa10.83□□□□□ -0.68
CLIP1-210ENST00000538120 YBEYP58557 167 aaPredicted RBP10.83□□□□□ -0.68
CLIP1-210ENST00000538120 TMPRSS15P98073 1019 aa10.83□□□□□ -0.68
CLIP1-210ENST00000538120 RBBP5Q15291 538 aaKnown RBP10.83□□□□□ -0.68
CLIP1-210ENST00000538120 PCSK7Q16549 785 aa10.83□□□□□ -0.68
CLIP1-210ENST00000538120 MBLAC2Q68D91 279 aa10.83□□□□□ -0.68
CLIP1-210ENST00000538120 FAM117BQ6P1L5 589 aa10.83□□□□□ -0.68
CLIP1-210ENST00000538120 IZUMO2Q6UXV1 221 aa10.83□□□□□ -0.68
CLIP1-210ENST00000538120 ATG14Q6ZNE5 492 aa10.83□□□□□ -0.68
CLIP1-210ENST00000538120 ZCCHC23Q6ZST2 131 aa10.83□□□□□ -0.68
CLIP1-210ENST00000538120 CLEC14AQ86T13 490 aa10.83□□□□□ -0.68
CLIP1-210ENST00000538120 CNTN4Q8IWV2 1026 aa10.83□□□□□ -0.68
CLIP1-210ENST00000538120 PDZD8Q8NEN9 1154 aa10.83□□□□□ -0.68
CLIP1-210ENST00000538120 PPHLN1Q8NEY8 458 aaKnown RBP10.83□□□□□ -0.68
CLIP1-210ENST00000538120 RAB3IL1Q8TBN0 382 aa10.83□□□□□ -0.68
CLIP1-210ENST00000538120 WBP2Q969T9 261 aa10.83□□□□□ -0.68
CLIP1-210ENST00000538120 MYRFLQ96LU7 910 aa10.83□□□□□ -0.68
CLIP1-210ENST00000538120 ZNF512Q96ME7 567 aaPredicted RBP10.83□□□□□ -0.68
CLIP1-210ENST00000538120 CDK5RAP1Q96SZ6 601 aaKnown RBP10.83□□□□□ -0.68
CLIP1-210ENST00000538120 FSD1LQ9BXM9 530 aa10.83□□□□□ -0.68
CLIP1-210ENST00000538120 RNF38Q9H0F5 515 aa10.83□□□□□ -0.68
CLIP1-210ENST00000538120 PDFQ9HBH1 243 aa10.83□□□□□ -0.68
CLIP1-210ENST00000538120 SLC7A8Q9UHI5 535 aa10.83□□□□□ -0.68
CLIP1-210ENST00000538120 PPM1HQ9ULR3 514 aa10.83□□□□□ -0.68
CLIP1-210ENST00000538120 PLA2G4CQ9UP65 541 aa10.83□□□□□ -0.68
CLIP1-210ENST00000538120 MAGEA13PA6NCF6 341 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 MEI4A8MW99 385 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 MUSKO15146 869 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 PRAMEF11O60813 436 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 VAPBO95292 243 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 AHSGP02765 367 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 FGF3P11487 239 aaPredicted RBP10.82□□□□□ -0.68
CLIP1-210ENST00000538120 ANPEPP15144 967 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 GCGRP47871 477 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 NUMBP49757 651 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 RAP1GDS1P52306 607 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 ALDH18A1P54886 795 aaKnown RBP10.82□□□□□ -0.68
CLIP1-210ENST00000538120 AQP5P55064 265 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 IRF9Q00978 393 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 UBAP2LQ14157 1087 aaKnown RBP10.82□□□□□ -0.68
CLIP1-210ENST00000538120 GRM3Q14832 879 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 PCLAFQ15004 111 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 HECTD3Q5T447 861 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 ATG16L1Q676U5 607 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 KLHDC10Q6PID8 442 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 JAZF1Q86VZ6 243 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 ZC3HC1Q86WB0 502 aaKnown RBP10.82□□□□□ -0.68
CLIP1-210ENST00000538120 MFN1Q8IWA4 741 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 SCUBE1Q8IWY4 988 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 ULK2Q8IYT8 1036 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 VPS39Q96JC1 886 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 TUBGCP5Q96RT8 1024 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 EBF4Q9BQW3 602 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 HERC2P3Q9BVR0 1158 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 CYP4F11Q9HBI6 524 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 GKN1Q9NS71 199 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 HSFX1Q9UBD0 423 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 YIPF1Q9Y548 306 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 A0A0D9SEW6 157 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 PRR5-ARHGAP8B1AHC4 643 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 F5H5T6 163 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 TIMM44O43615 452 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 SIN3BO75182 1162 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 BAG2O95816 211 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 LYNP07948 512 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 ETFBP38117 255 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 PGGT1BP53609 377 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 ARHGAP8P85298 464 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 ITKQ08881 620 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 CNGA3Q16281 694 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 DBN1Q16643 649 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 TPGS2Q68CL5 300 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 TMPRSS6Q8IU80 811 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 MFSD6LQ8IWD5 586 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 DENND6AQ8IWF6 608 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 CFAP61Q8NHU2 1237 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 PRICKLE1Q96MT3 831 aaPredicted RBP10.82□□□□□ -0.68
CLIP1-210ENST00000538120 ZNF558Q96NG5 402 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 GPR22Q99680 433 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 VPS45Q9NRW7 570 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 ACTL7AQ9Y615 435 aa10.82□□□□□ -0.68
CLIP1-210ENST00000538120 ZFP37Q9Y6Q3 630 aaPredicted RBP10.82□□□□□ -0.68
CLIP1-210ENST00000538120 A0A096LPK6 155 aa10.81□□□□□ -0.68
CLIP1-210ENST00000538120 ABHD14A-ACY1A0A1B0GW23 586 aa10.81□□□□□ -0.68
CLIP1-210ENST00000538120 ITM2AO43736 263 aa10.81□□□□□ -0.68
CLIP1-210ENST00000538120 STC2O76061 302 aa10.81□□□□□ -0.68
CLIP1-210ENST00000538120 SORBS2O94875 1100 aaKnown RBP10.81□□□□□ -0.68
CLIP1-210ENST00000538120 MPOP05164 745 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms