RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 C7orf57Q8NEG2 295 aa3.72□□□□□ -1.81
USP48-215ENST00000534705 GABPB2Q8TAK5 448 aaPredicted RBP3.72□□□□□ -1.81
USP48-215ENST00000534705 TMEM163Q8TC26 289 aa3.72□□□□□ -1.81
USP48-215ENST00000534705 C2CD4CQ8TF44 421 aa3.72□□□□□ -1.81
USP48-215ENST00000534705 FAR1Q8WVX9 515 aa3.72□□□□□ -1.81
USP48-215ENST00000534705 GOLGA1Q92805 767 aa3.72□□□□□ -1.81
USP48-215ENST00000534705 KCNJ9Q92806 393 aa3.72□□□□□ -1.81
USP48-215ENST00000534705 WBP1Q96G27 269 aa3.72□□□□□ -1.81
USP48-215ENST00000534705 CAMK1GQ96NX5 476 aa3.72□□□□□ -1.81
USP48-215ENST00000534705 WDR77Q9BQA1 342 aaPredicted RBP3.72□□□□□ -1.81
USP48-215ENST00000534705 IFT27Q9BW83 186 aa3.72□□□□□ -1.81
USP48-215ENST00000534705 B3GNT4Q9C0J1 378 aa3.72□□□□□ -1.81
USP48-215ENST00000534705 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.72□□□□□ -1.81
USP48-215ENST00000534705 TMX4Q9H1E5 349 aaPredicted RBP3.72□□□□□ -1.81
USP48-215ENST00000534705 PLEKHA2Q9HB19 425 aa3.72□□□□□ -1.81
USP48-215ENST00000534705 THAP1Q9NVV9 213 aa3.72□□□□□ -1.81
USP48-215ENST00000534705 UPB1Q9UBR1 384 aa3.72□□□□□ -1.81
USP48-215ENST00000534705 KLQ9UEF7 1012 aa3.72□□□□□ -1.81
USP48-215ENST00000534705 DERAQ9Y315 318 aa3.72□□□□□ -1.81
USP48-215ENST00000534705 SCINQ9Y6U3 715 aa3.72□□□□□ -1.81
USP48-215ENST00000534705 FER1L6Q2WGJ9 1857 aa3.72□□□□□ -1.81
USP48-215ENST00000534705 RPS10-NUDT3A0A1W2PQS6 291 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 C17orf102A2RUQ5 167 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 SERINC4A6NH21 518 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 C17orf100A8MU93 164 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 H0YGN5 161 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 GTPBP1O00178 669 aaKnown RBP3.71□□□□□ -1.82
USP48-215ENST00000534705 SYN3O14994 580 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 RNMTO43148 476 aaKnown RBP3.71□□□□□ -1.82
USP48-215ENST00000534705 TMCC1O94876 653 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 MMP3P08254 477 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 DHRS4L1P0CG22 281 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 LYL1P12980 280 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 ARSAP15289 507 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 BDNFP23560 247 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 KLRC2P26717 231 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 CDC25AP30304 524 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 AVPR2P30518 371 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 ARRB2P32121 409 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 CLCNKBP51801 687 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 MVDP53602 400 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 SELENOVP59797 346 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 ZP1P60852 638 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 ROR2Q01974 943 aaKnown RBP3.71□□□□□ -1.82
USP48-215ENST00000534705 CUL4BQ13620 913 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 SLC15A2Q16348 729 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 DUSP6Q16828 381 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 CTXN3Q4LDR2 81 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 INO80DQ53TQ3 878 aaPredicted RBP3.71□□□□□ -1.82
USP48-215ENST00000534705 ZNF484Q5JVG2 852 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 NCAPH2Q6IBW4 605 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 RNF144BQ7Z419 303 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 MOGAT3Q86VF5 341 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 SMAP1Q8IYB5 467 aaPredicted RBP3.71□□□□□ -1.82
USP48-215ENST00000534705 DCP1BQ8IZD4 617 aaKnown RBP3.71□□□□□ -1.82
USP48-215ENST00000534705 SCAIQ8N9R8 606 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 TEX19Q8NA77 164 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 USP38Q8NB14 1042 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 PIGBQ92521 554 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 NCSTNQ92542 709 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 HERC2P3Q9BVR0 1158 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 ISCUQ9H1K1 167 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 PDCL3Q9H2J4 239 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 ZHX3Q9H4I2 956 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 PLAC1Q9HBJ0 212 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 PTPRHQ9HD43 1115 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 RRAGDQ9NQL2 400 aaPredicted RBP3.71□□□□□ -1.82
USP48-215ENST00000534705 PLK2Q9NYY3 685 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 SELENONQ9NZV5 590 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 CD207Q9UJ71 328 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 PCDHA7Q9UN72 937 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 PALLDQ8WX93 1383 aa3.71□□□□□ -1.82
USP48-215ENST00000534705 DDX60Q8IY21 1712 aaKnown RBP3.7□□□□□ -1.82
USP48-215ENST00000534705 SPEF2Q9C093 1822 aa3.7□□□□□ -1.82
USP48-215ENST00000534705 CKAP5Q14008 2032 aa3.7□□□□□ -1.82
USP48-215ENST00000534705 A0A0U1RQG5 324 aaPredicted RBP3.7□□□□□ -1.82
USP48-215ENST00000534705 TNFRSF13BO14836 293 aaPredicted RBP3.7□□□□□ -1.82
USP48-215ENST00000534705 SPRY3O43610 288 aa3.7□□□□□ -1.82
USP48-215ENST00000534705 KRT38O76015 456 aa3.7□□□□□ -1.82
USP48-215ENST00000534705 HMOX1P09601 288 aa3.7□□□□□ -1.82
USP48-215ENST00000534705 FCGR2AP12318 317 aa3.7□□□□□ -1.82
USP48-215ENST00000534705 ARSBP15848 533 aa3.7□□□□□ -1.82
USP48-215ENST00000534705 CHRNB2P17787 502 aa3.7□□□□□ -1.82
USP48-215ENST00000534705 ANP32AP39687 249 aaKnown RBP3.7□□□□□ -1.82
USP48-215ENST00000534705 CDKN2AP42771 156 aaKnown RBP3.7□□□□□ -1.82
USP48-215ENST00000534705 PAPOLAP51003 745 aaKnown RBP3.7□□□□□ -1.82
USP48-215ENST00000534705 TERF1P54274 439 aa3.7□□□□□ -1.82
USP48-215ENST00000534705 EGR4Q05215 589 aa3.7□□□□□ -1.82
USP48-215ENST00000534705 GOLGA8FQ08AF8 430 aa3.7□□□□□ -1.82
USP48-215ENST00000534705 MTHFSDQ2M296 383 aaKnown RBP3.7□□□□□ -1.82
USP48-215ENST00000534705 ALFQ53S48 1182 aa3.7□□□□□ -1.82
USP48-215ENST00000534705 CBWD5Q5RIA9 395 aa3.7□□□□□ -1.82
USP48-215ENST00000534705 WASHC2DQ5SRD0 308 aa3.7□□□□□ -1.82
USP48-215ENST00000534705 CCDC70Q6NSX1 233 aa3.7□□□□□ -1.82
USP48-215ENST00000534705 DENND1BQ6P3S1 775 aa3.7□□□□□ -1.82
USP48-215ENST00000534705 SYNE3Q6ZMZ3 975 aa3.7□□□□□ -1.82
USP48-215ENST00000534705 SLC16A12Q6ZSM3 486 aa3.7□□□□□ -1.82
USP48-215ENST00000534705 WDR5BQ86VZ2 330 aa3.7□□□□□ -1.82
USP48-215ENST00000534705 FOXP4Q8IVH2 680 aaPredicted RBP3.7□□□□□ -1.82
USP48-215ENST00000534705 FAM217AQ8IXS0 508 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms