RNA–Protein interactions for RNA: ENST00000533678.1

RDX-214, Transcript of radixin, humanhuman

TSL 4

Gene RDX, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-214ENST00000533678 IFT43Q96FT9 208 aa16.53■□□□□ 0.24
RDX-214ENST00000533678 CDC6Q99741 560 aa16.53■□□□□ 0.24
RDX-214ENST00000533678 PCDH12Q9NPG4 1184 aa16.53■□□□□ 0.24
RDX-214ENST00000533678 PCOLCE2Q9UKZ9 415 aa16.53■□□□□ 0.24
RDX-214ENST00000533678 TFR2Q9UP52 801 aa16.53■□□□□ 0.24
RDX-214ENST00000533678 ITM2BQ9Y287 266 aa16.53■□□□□ 0.24
RDX-214ENST00000533678 ATP8A1Q9Y2Q0 1164 aa16.53■□□□□ 0.24
RDX-214ENST00000533678 MACROD2A1Z1Q3 448 aa16.52■□□□□ 0.24
RDX-214ENST00000533678 GIPC1O14908 333 aa16.52■□□□□ 0.24
RDX-214ENST00000533678 PJA2O43164 708 aa16.52■□□□□ 0.24
RDX-214ENST00000533678 HTRA2O43464 458 aaPredicted RBP16.52■□□□□ 0.24
RDX-214ENST00000533678 CBFA2T3O75081 653 aa16.52■□□□□ 0.24
RDX-214ENST00000533678 PROS1P07225 676 aa16.52■□□□□ 0.24
RDX-214ENST00000533678 GRK6P43250 576 aa16.52■□□□□ 0.24
RDX-214ENST00000533678 RABIFP47224 123 aa16.52■□□□□ 0.24
RDX-214ENST00000533678 GBE1Q04446 702 aa16.52■□□□□ 0.24
RDX-214ENST00000533678 TFDP2Q14188 446 aa16.52■□□□□ 0.24
RDX-214ENST00000533678 TRIP6Q15654 476 aaKnown RBP16.52■□□□□ 0.24
RDX-214ENST00000533678 TAZQ16635 292 aa16.52■□□□□ 0.24
RDX-214ENST00000533678 UNQ6494/PRO21346Q6UXR6 183 aa16.52■□□□□ 0.24
RDX-214ENST00000533678 RCOR2Q8IZ40 523 aa16.52■□□□□ 0.24
RDX-214ENST00000533678 RHBDD1Q8TEB9 315 aa16.52■□□□□ 0.24
RDX-214ENST00000533678 BMFQ96LC9 184 aa16.52■□□□□ 0.24
RDX-214ENST00000533678 KLF6Q99612 283 aaPredicted RBP16.52■□□□□ 0.24
RDX-214ENST00000533678 POLR1EQ9GZS1 481 aaKnown RBP16.52■□□□□ 0.24
RDX-214ENST00000533678 BRD8Q9H0E9 1235 aa16.52■□□□□ 0.24
RDX-214ENST00000533678 FZD3Q9NPG1 666 aa16.52■□□□□ 0.24
RDX-214ENST00000533678 DTLQ9NZJ0 730 aa16.52■□□□□ 0.24
RDX-214ENST00000533678 GGT7Q9UJ14 662 aa16.52■□□□□ 0.24
RDX-214ENST00000533678 CEP295Q9C0D2 2601 aa16.52■□□□□ 0.23
RDX-214ENST00000533678 BAHCC1Q9P281 2608 aa16.52■□□□□ 0.23
RDX-214ENST00000533678 CACNA1GO43497 2377 aa16.52■□□□□ 0.23
RDX-214ENST00000533678 SPEGQ15772 3267 aa16.52■□□□□ 0.23
RDX-214ENST00000533678 KNL1Q8NG31 2342 aa16.52■□□□□ 0.23
RDX-214ENST00000533678 CABIN1Q9Y6J0 2220 aa16.51■□□□□ 0.23
RDX-214ENST00000533678 MMP20O60882 483 aa16.51■□□□□ 0.23
RDX-214ENST00000533678 NEBLO76041 1014 aa16.51■□□□□ 0.23
RDX-214ENST00000533678 TRIM16O95361 564 aa16.51■□□□□ 0.23
RDX-214ENST00000533678 ITGAVP06756 1048 aa16.51■□□□□ 0.23
RDX-214ENST00000533678 CCNB1P14635 433 aa16.51■□□□□ 0.23
RDX-214ENST00000533678 MMP12P39900 470 aa16.51■□□□□ 0.23
RDX-214ENST00000533678 NR2C2P49116 596 aa16.51■□□□□ 0.23
RDX-214ENST00000533678 PPIDQ08752 370 aaKnown RBP16.51■□□□□ 0.23
RDX-214ENST00000533678 SLC10A2Q12908 348 aaPredicted RBP16.51■□□□□ 0.23
RDX-214ENST00000533678 COL9A2Q14055 689 aaPredicted RBP16.51■□□□□ 0.23
RDX-214ENST00000533678 AGERQ15109 404 aa16.51■□□□□ 0.23
RDX-214ENST00000533678 PDK1Q15118 436 aa16.51■□□□□ 0.23
RDX-214ENST00000533678 SHBQ15464 509 aa16.51■□□□□ 0.23
RDX-214ENST00000533678 ALG1LQ6GMV1 187 aa16.51■□□□□ 0.23
RDX-214ENST00000533678 Q6ZSR6 202 aa16.51■□□□□ 0.23
RDX-214ENST00000533678 ZSWIM9Q86XI8 627 aa16.51■□□□□ 0.23
RDX-214ENST00000533678 RFX6Q8HWS3 928 aa16.51■□□□□ 0.23
RDX-214ENST00000533678 CCDC13Q8IYE1 715 aa16.51■□□□□ 0.23
RDX-214ENST00000533678 KATNAL2Q8IYT4 538 aa16.51■□□□□ 0.23
RDX-214ENST00000533678 SYCE1Q8N0S2 351 aa16.51■□□□□ 0.23
RDX-214ENST00000533678 PLD5Q8N7P1 536 aa16.51■□□□□ 0.23
RDX-214ENST00000533678 CCNYQ8ND76 341 aa16.51■□□□□ 0.23
RDX-214ENST00000533678 TPCN2Q8NHX9 752 aa16.51■□□□□ 0.23
RDX-214ENST00000533678 BAHD1Q8TBE0 780 aaPredicted RBP16.51■□□□□ 0.23
RDX-214ENST00000533678 KIAA1524Q8TCG1 905 aa16.51■□□□□ 0.23
RDX-214ENST00000533678 SAP25Q8TEE9 199 aa16.51■□□□□ 0.23
RDX-214ENST00000533678 RNF25Q96BH1 459 aaPredicted RBP16.51■□□□□ 0.23
RDX-214ENST00000533678 CENPTQ96BT3 561 aa16.51■□□□□ 0.23
RDX-214ENST00000533678 MYOCQ99972 504 aa16.51■□□□□ 0.23
RDX-214ENST00000533678 NOD2Q9HC29 1040 aa16.51■□□□□ 0.23
RDX-214ENST00000533678 NT5MQ9NPB1 228 aa16.51■□□□□ 0.23
RDX-214ENST00000533678 GPR27Q9NS67 375 aa16.51■□□□□ 0.23
RDX-214ENST00000533678 RBM22Q9NW64 420 aaKnown RBP eCLIP16.51■□□□□ 0.23
RDX-214ENST00000533678 PHTF1Q9UMS5 762 aa16.51■□□□□ 0.23
RDX-214ENST00000533678 GUCA1BQ9UMX6 200 aa16.51■□□□□ 0.23
RDX-214ENST00000533678 CA5BQ9Y2D0 317 aa16.51■□□□□ 0.23
RDX-214ENST00000533678 HYOU1Q9Y4L1 999 aa16.51■□□□□ 0.23
RDX-214ENST00000533678 ADGRG1Q9Y653 693 aa16.51■□□□□ 0.23
RDX-214ENST00000533678 COL5A1P20908 1838 aaPredicted RBP16.51■□□□□ 0.23
RDX-214ENST00000533678 CNOT1A5YKK6 2376 aaKnown RBP16.51■□□□□ 0.23
RDX-214ENST00000533678 PPP1R12AO14974 1030 aaPredicted RBP16.5■□□□□ 0.23
RDX-214ENST00000533678 RAD51BO15315 384 aa16.5■□□□□ 0.23
RDX-214ENST00000533678 ZSCAN12O43309 604 aa16.5■□□□□ 0.23
RDX-214ENST00000533678 ZRANB2O95218 330 aaKnown RBP eCLIP16.5■□□□□ 0.23
RDX-214ENST00000533678 ITIH2P19823 946 aa16.5■□□□□ 0.23
RDX-214ENST00000533678 EPHA8P29322 1005 aaPredicted RBP16.5■□□□□ 0.23
RDX-214ENST00000533678 CDKN2BP42772 138 aa16.5■□□□□ 0.23
RDX-214ENST00000533678 CLDN2P57739 230 aa16.5■□□□□ 0.23
RDX-214ENST00000533678 YPEL5P62699 121 aa16.5■□□□□ 0.23
RDX-214ENST00000533678 FAM193AP78312 1265 aa16.5■□□□□ 0.23
RDX-214ENST00000533678 SIM1P81133 766 aaPredicted RBP16.5■□□□□ 0.23
RDX-214ENST00000533678 CCZ1BP86790 482 aa16.5■□□□□ 0.23
RDX-214ENST00000533678 CCZ1P86791 482 aaPredicted RBP16.5■□□□□ 0.23
RDX-214ENST00000533678 PTK2BQ14289 1009 aa16.5■□□□□ 0.23
RDX-214ENST00000533678 TFDP3Q5H9I0 405 aa16.5■□□□□ 0.23
RDX-214ENST00000533678 LRRC73Q5JTD7 316 aa16.5■□□□□ 0.23
RDX-214ENST00000533678 DPPA4Q7L190 304 aa16.5■□□□□ 0.23
RDX-214ENST00000533678 NDUFAF2Q8N183 169 aa16.5■□□□□ 0.23
RDX-214ENST00000533678 OR13H1Q8NG92 308 aa16.5■□□□□ 0.23
RDX-214ENST00000533678 EXD1Q8NHP7 514 aa16.5■□□□□ 0.23
RDX-214ENST00000533678 RBM41Q96IZ5 413 aaKnown RBP16.5■□□□□ 0.23
RDX-214ENST00000533678 CAMK1GQ96NX5 476 aa16.5■□□□□ 0.23
RDX-214ENST00000533678 WRAP53Q9BUR4 548 aaKnown RBP16.5■□□□□ 0.23
RDX-214ENST00000533678 LZTFL1Q9NQ48 299 aa16.5■□□□□ 0.23
RDX-214ENST00000533678 KCTD5Q9NXV2 234 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms