RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 ZFR2Q9UPR6 939 aaKnown RBP8.83□□□□□ -1
COPB1-210ENST00000533533 HS3ST3A1Q9Y663 406 aa8.83□□□□□ -1
COPB1-210ENST00000533533 EPN1Q9Y6I3 576 aaPredicted RBP8.83□□□□□ -1
COPB1-210ENST00000533533 RP1L1Q8IWN7 2480 aaPredicted RBP8.83□□□□□ -1
COPB1-210ENST00000533533 ARHGEF17Q96PE2 2063 aaPredicted RBP8.82□□□□□ -1
COPB1-210ENST00000533533 COL12A1Q99715 3063 aa8.82□□□□□ -1
COPB1-210ENST00000533533 A6NNZ2 444 aa8.82□□□□□ -1
COPB1-210ENST00000533533 EIF3CLB5ME19 914 aaKnown RBP8.82□□□□□ -1
COPB1-210ENST00000533533 RASA4BC9J798 803 aa8.82□□□□□ -1
COPB1-210ENST00000533533 K7ESM1 405 aa8.82□□□□□ -1
COPB1-210ENST00000533533 RNF103O00237 685 aa8.82□□□□□ -1
COPB1-210ENST00000533533 DFFAO00273 331 aa8.82□□□□□ -1
COPB1-210ENST00000533533 RIOK3O14730 519 aaKnown RBP8.82□□□□□ -1
COPB1-210ENST00000533533 KLK10O43240 276 aa8.82□□□□□ -1
COPB1-210ENST00000533533 RASA4O43374 803 aa8.82□□□□□ -1
COPB1-210ENST00000533533 BUB1O43683 1085 aa8.82□□□□□ -1
COPB1-210ENST00000533533 SPOPO43791 374 aa8.82□□□□□ -1
COPB1-210ENST00000533533 LZTS3O60299 673 aaPredicted RBP8.82□□□□□ -1
COPB1-210ENST00000533533 NEBLO76041 1014 aa8.82□□□□□ -1
COPB1-210ENST00000533533 ERCC2P18074 760 aa8.82□□□□□ -1
COPB1-210ENST00000533533 HTR7P34969 479 aa8.82□□□□□ -1
COPB1-210ENST00000533533 RECQLP46063 649 aaPredicted RBP8.82□□□□□ -1
COPB1-210ENST00000533533 ISXQ2M1V0 245 aa8.82□□□□□ -1
COPB1-210ENST00000533533 ARSIQ5FYB1 569 aa8.82□□□□□ -1
COPB1-210ENST00000533533 TXNRD3NBQ6F5E7 133 aa8.82□□□□□ -1
COPB1-210ENST00000533533 IGF2-ASQ6U949 168 aa8.82□□□□□ -1
COPB1-210ENST00000533533 RAD9BQ6WBX8 426 aa8.82□□□□□ -1
COPB1-210ENST00000533533 ZNF783Q6ZMS7 281 aa8.82□□□□□ -1
COPB1-210ENST00000533533 RFX8Q6ZV50 586 aa8.82□□□□□ -1
COPB1-210ENST00000533533 PTAR1Q7Z6K3 402 aaPredicted RBP8.82□□□□□ -1
COPB1-210ENST00000533533 NLRP14Q86W24 1093 aa8.82□□□□□ -1
COPB1-210ENST00000533533 PSTKQ8IV42 348 aaKnown RBP8.82□□□□□ -1
COPB1-210ENST00000533533 NIPA2Q8N8Q9 360 aa8.82□□□□□ -1
COPB1-210ENST00000533533 NETO2Q8NC67 525 aa8.82□□□□□ -1
COPB1-210ENST00000533533 KCTD6Q8NC69 237 aa8.82□□□□□ -1
COPB1-210ENST00000533533 CHST14Q8NCH0 376 aa8.82□□□□□ -1
COPB1-210ENST00000533533 ACRBPQ8NEB7 543 aa8.82□□□□□ -1
COPB1-210ENST00000533533 IFI44Q8TCB0 444 aa8.82□□□□□ -1
COPB1-210ENST00000533533 GRIN3AQ8TCU5 1115 aa8.82□□□□□ -1
COPB1-210ENST00000533533 MAPK15Q8TD08 544 aa8.82□□□□□ -1
COPB1-210ENST00000533533 SNRNP27Q8WVK2 155 aaKnown RBP8.82□□□□□ -1
COPB1-210ENST00000533533 ARHGEF2Q92974 986 aaKnown RBP8.82□□□□□ -1
COPB1-210ENST00000533533 PPP1R16AQ96I34 528 aa8.82□□□□□ -1
COPB1-210ENST00000533533 BMFQ96LC9 184 aa8.82□□□□□ -1
COPB1-210ENST00000533533 EIF3CQ99613 913 aaKnown RBP8.82□□□□□ -1
COPB1-210ENST00000533533 DPH1Q9BZG8 443 aa8.82□□□□□ -1
COPB1-210ENST00000533533 MAGEH1Q9H213 219 aa8.82□□□□□ -1
COPB1-210ENST00000533533 TNKS2Q9H2K2 1166 aa8.82□□□□□ -1
COPB1-210ENST00000533533 GRPEL1Q9HAV7 217 aa8.82□□□□□ -1
COPB1-210ENST00000533533 DONSONQ9NYP3 566 aa8.82□□□□□ -1
COPB1-210ENST00000533533 CWC15Q9P013 229 aaKnown RBP8.82□□□□□ -1
COPB1-210ENST00000533533 IL36AQ9UHA7 158 aa8.82□□□□□ -1
COPB1-210ENST00000533533 LCMT1Q9UIC8 334 aa8.82□□□□□ -1
COPB1-210ENST00000533533 INTUQ9ULD6 942 aa8.82□□□□□ -1
COPB1-210ENST00000533533 BOLA1Q9Y3E2 137 aa8.82□□□□□ -1
COPB1-210ENST00000533533 HYOU1Q9Y4L1 999 aa8.82□□□□□ -1
COPB1-210ENST00000533533 SPTY2D1-AS1A0A0U1RR47 76 aa8.81□□□□□ -1
COPB1-210ENST00000533533 POM121BA6NF01 834 aa8.81□□□□□ -1
COPB1-210ENST00000533533 ZNF821O75541 412 aaPredicted RBP8.81□□□□□ -1
COPB1-210ENST00000533533 LEFTY1O75610 366 aa8.81□□□□□ -1
COPB1-210ENST00000533533 PAK4O96013 591 aaPredicted RBP8.81□□□□□ -1
COPB1-210ENST00000533533 CSF2P04141 144 aa8.81□□□□□ -1
COPB1-210ENST00000533533 KRT7P08729 469 aa8.81□□□□□ -1
COPB1-210ENST00000533533 NME1P15531 152 aaKnown RBP8.81□□□□□ -1
COPB1-210ENST00000533533 TGM2P21980 687 aa8.81□□□□□ -1
COPB1-210ENST00000533533 AMPD1P23109 780 aa8.81□□□□□ -1
COPB1-210ENST00000533533 ARHGAP25P42331 645 aa8.81□□□□□ -1
COPB1-210ENST00000533533 NEK3P51956 506 aa8.81□□□□□ -1
COPB1-210ENST00000533533 GSDMDP57764 484 aa8.81□□□□□ -1
COPB1-210ENST00000533533 YBEYP58557 167 aaPredicted RBP8.81□□□□□ -1
COPB1-210ENST00000533533 TAS2R40P59535 323 aa8.81□□□□□ -1
COPB1-210ENST00000533533 RPS21P63220 83 aaKnown RBP8.81□□□□□ -1
COPB1-210ENST00000533533 SLC25A11Q02978 314 aaKnown RBP8.81□□□□□ -1
COPB1-210ENST00000533533 VAC14Q08AM6 782 aa8.81□□□□□ -1
COPB1-210ENST00000533533 FGL2Q14314 439 aa8.81□□□□□ -1
COPB1-210ENST00000533533 FZD2Q14332 565 aa8.81□□□□□ -1
COPB1-210ENST00000533533 DPYSL2Q16555 572 aa8.81□□□□□ -1
COPB1-210ENST00000533533 CDKN3Q16667 212 aa8.81□□□□□ -1
COPB1-210ENST00000533533 ATP13A4Q4VNC1 1196 aa8.81□□□□□ -1
COPB1-210ENST00000533533 KIAA1161Q6NSJ0 714 aa8.81□□□□□ -1
COPB1-210ENST00000533533 ZCCHC8Q6NZY4 707 aaKnown RBP8.81□□□□□ -1
COPB1-210ENST00000533533 C22orf39Q6P5X5 142 aa8.81□□□□□ -1
COPB1-210ENST00000533533 KYAT3Q6YP21 454 aaKnown RBP8.81□□□□□ -1
COPB1-210ENST00000533533 DPY19L3Q6ZPD9 716 aa8.81□□□□□ -1
COPB1-210ENST00000533533 CYP4V2Q6ZWL3 525 aaPredicted RBP8.81□□□□□ -1
COPB1-210ENST00000533533 PARGQ86W56 976 aa8.81□□□□□ -1
COPB1-210ENST00000533533 ZNF548Q8NEK5 533 aaPredicted RBP8.81□□□□□ -1
COPB1-210ENST00000533533 TEKT4Q8WW24 435 aa8.81□□□□□ -1
COPB1-210ENST00000533533 TTC9Q92623 222 aa8.81□□□□□ -1
COPB1-210ENST00000533533 GRAMD1AQ96CP6 724 aa8.81□□□□□ -1
COPB1-210ENST00000533533 HMCESQ96FZ2 354 aa8.81□□□□□ -1
COPB1-210ENST00000533533 FEM1CQ96JP0 617 aa8.81□□□□□ -1
COPB1-210ENST00000533533 SLC46A1Q96NT5 459 aa8.81□□□□□ -1
COPB1-210ENST00000533533 DESI2Q9BSY9 194 aa8.81□□□□□ -1
COPB1-210ENST00000533533 SLC17A9Q9BYT1 436 aa8.81□□□□□ -1
COPB1-210ENST00000533533 TM6SF2Q9BZW4 377 aa8.81□□□□□ -1
COPB1-210ENST00000533533 SEMA4CQ9C0C4 833 aa8.81□□□□□ -1
COPB1-210ENST00000533533 RETREG1Q9H6L5 497 aa8.81□□□□□ -1
COPB1-210ENST00000533533 PCDH18Q9HCL0 1135 aa8.81□□□□□ -1
COPB1-210ENST00000533533 NCKIPSDQ9NZQ3 722 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms