RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 PLEKHB1Q9UF11 243 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 TUBD1Q9UJT1 453 aa11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 CDC23Q9UJX2 597 aa11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 BOD1L1Q8NFC6 3051 aa11.48□□□□□ -0.57
TRAPPC4-213ENST00000533149 A0A1W2PQU0 124 aa11.48□□□□□ -0.57
TRAPPC4-213ENST00000533149 YJEFN3A6XGL0 299 aa11.48□□□□□ -0.57
TRAPPC4-213ENST00000533149 E7ENQ6 273 aa11.48□□□□□ -0.57
TRAPPC4-213ENST00000533149 MUSKO15146 869 aa11.48□□□□□ -0.57
TRAPPC4-213ENST00000533149 AQP9O43315 295 aa11.48□□□□□ -0.57
TRAPPC4-213ENST00000533149 LUC7L3O95232 432 aaKnown RBP11.48□□□□□ -0.57
TRAPPC4-213ENST00000533149 IGLV3-27P01718 113 aa11.48□□□□□ -0.57
TRAPPC4-213ENST00000533149 FYNP06241 537 aa11.48□□□□□ -0.57
TRAPPC4-213ENST00000533149 NME1P15531 152 aaKnown RBP11.48□□□□□ -0.57
TRAPPC4-213ENST00000533149 TCP1P17987 556 aaKnown RBP11.48□□□□□ -0.57
TRAPPC4-213ENST00000533149 SDC4P31431 198 aa11.48□□□□□ -0.57
TRAPPC4-213ENST00000533149 CXCR5P32302 372 aa11.48□□□□□ -0.57
TRAPPC4-213ENST00000533149 PEX5P50542 639 aa11.48□□□□□ -0.57
TRAPPC4-213ENST00000533149 METAP1P53582 386 aa11.48□□□□□ -0.57
TRAPPC4-213ENST00000533149 RPS24P62847 133 aaKnown RBP11.48□□□□□ -0.57
TRAPPC4-213ENST00000533149 SULT2A1Q06520 285 aa11.48□□□□□ -0.57
TRAPPC4-213ENST00000533149 KCNAB2Q13303 367 aa11.48□□□□□ -0.57
TRAPPC4-213ENST00000533149 C15orf59Q2T9L4 293 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC4-213ENST00000533149 FSCBQ5H9T9 825 aa11.48□□□□□ -0.57
TRAPPC4-213ENST00000533149 PERM1Q5SV97 790 aa11.48□□□□□ -0.57
TRAPPC4-213ENST00000533149 BORAQ6PGQ7 559 aa11.48□□□□□ -0.57
TRAPPC4-213ENST00000533149 Q6ZSR6 202 aa11.48□□□□□ -0.57
TRAPPC4-213ENST00000533149 BHLHA9Q7RTU4 235 aa11.48□□□□□ -0.57
TRAPPC4-213ENST00000533149 HORMAD1Q86X24 394 aa11.48□□□□□ -0.57
TRAPPC4-213ENST00000533149 SLC22A18ASQ8N1D0 253 aa11.48□□□□□ -0.57
TRAPPC4-213ENST00000533149 UBL4BQ8N7F7 174 aa11.48□□□□□ -0.57
TRAPPC4-213ENST00000533149 COG1Q8WTW3 980 aa11.48□□□□□ -0.57
TRAPPC4-213ENST00000533149 PBKQ96KB5 322 aa11.48□□□□□ -0.57
TRAPPC4-213ENST00000533149 CFAP57Q96MR6 1250 aa11.48□□□□□ -0.57
TRAPPC4-213ENST00000533149 SLC2A13Q96QE2 648 aa11.48□□□□□ -0.57
TRAPPC4-213ENST00000533149 PSMB7Q99436 277 aa11.48□□□□□ -0.57
TRAPPC4-213ENST00000533149 L2HGDHQ9H9P8 463 aa11.48□□□□□ -0.57
TRAPPC4-213ENST00000533149 EPB41L5Q9HCM4 733 aa11.48□□□□□ -0.57
TRAPPC4-213ENST00000533149 SARDHQ9UL12 918 aa11.48□□□□□ -0.57
TRAPPC4-213ENST00000533149 PPM1HQ9ULR3 514 aa11.48□□□□□ -0.57
TRAPPC4-213ENST00000533149 PCDHA3Q9Y5H8 950 aa11.48□□□□□ -0.57
TRAPPC4-213ENST00000533149 LRRK2Q5S007 2527 aa11.48□□□□□ -0.57
TRAPPC4-213ENST00000533149 CCDC66A2RUB6 948 aa11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 ZNF185O15231 689 aa11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 ALOX15BO15296 676 aa11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 DAB1O75553 588 aa11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 RNF8O76064 485 aa11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 LTFP02788 710 aa11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 JMJD7P0C870 316 aa11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 VAV1P15498 845 aa11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 CTNNA1P35221 906 aaKnown RBP11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 NOS2P35228 1153 aa11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 PTPN9P43378 593 aa11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 CYP4F2P78329 520 aa11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 ATP11AP98196 1134 aa11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 SLC12A1Q13621 1099 aa11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 ZNF284Q2VY69 593 aa11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 DEFB133Q30KQ1 61 aa11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 RAB6CQ53S08 254 aa11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 DCAF6Q58WW2 860 aa11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 SYPL2Q5VXT5 272 aa11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 PTAR1Q7Z6K3 402 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 PARGQ86W56 976 aa11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 ATCAYQ86WG3 371 aa11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 RHOT1Q8IXI2 618 aa11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 FRS2Q8WU20 508 aa11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 ALG3Q92685 438 aa11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 KLK6Q92876 244 aa11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 PRICKLE1Q96MT3 831 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 CCDC3Q9BQI4 270 aa11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 BOCQ9BWV1 1114 aa11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 RAB6CQ9H0N0 254 aa11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 SYNDIG1Q9H7V2 258 aa11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 POPDC2Q9HBU9 364 aa11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 FZD3Q9NPG1 666 aa11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 SRPK3Q9UPE1 567 aa11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 NAALADL1Q9UQQ1 740 aa11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 MRFAP1Q9Y605 127 aa11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 HS3ST3A1Q9Y663 406 aa11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 CREBBPQ92793 2442 aa11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 TLN1Q9Y490 2541 aaKnown RBP11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 TEP1Q99973 2627 aaKnown RBP11.47□□□□□ -0.57
TRAPPC4-213ENST00000533149 TDRD6O60522 2096 aaKnown RBP11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 FLNCQ14315 2725 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 SPTY2D1-AS1A0A0U1RR47 76 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 NTN3O00634 580 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 MCF2LO15068 1137 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 CEP104O60308 925 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 LRCH4O75427 683 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 TRUB2O95900 331 aaKnown RBP11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 TCF4P15884 667 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 TFE3P19532 575 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 MIPP30301 263 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 PCK1P35558 622 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 MARCKSL1P49006 195 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 STK19P49842 368 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 VASPP50552 380 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 POLE2P56282 527 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 RIPPLY3P57055 190 aa11.46□□□□□ -0.57
TRAPPC4-213ENST00000533149 RWDD2BP57060 319 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms