RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 USP12O75317 370 aa4.59□□□□□ -1.67
USP47-211ENST00000531513 TBX10O75333 385 aa4.59□□□□□ -1.67
USP47-211ENST00000531513 OAZ2O95190 189 aa4.59□□□□□ -1.67
USP47-211ENST00000531513 IPO7O95373 1038 aaKnown RBP4.59□□□□□ -1.67
USP47-211ENST00000531513 CBX6O95503 412 aa4.59□□□□□ -1.67
USP47-211ENST00000531513 IRF1P10914 325 aa4.59□□□□□ -1.67
USP47-211ENST00000531513 SCG2P13521 617 aa4.59□□□□□ -1.67
USP47-211ENST00000531513 GABRB1P18505 474 aa4.59□□□□□ -1.67
USP47-211ENST00000531513 PTMSP20962 102 aa4.59□□□□□ -1.67
USP47-211ENST00000531513 OAS2P29728 719 aaKnown RBP4.59□□□□□ -1.67
USP47-211ENST00000531513 CTNNA1P35221 906 aaKnown RBP4.59□□□□□ -1.67
USP47-211ENST00000531513 PIP4K2AP48426 406 aaPredicted RBP4.59□□□□□ -1.67
USP47-211ENST00000531513 LMAN1P49257 510 aa4.59□□□□□ -1.67
USP47-211ENST00000531513 PPP5CP53041 499 aa4.59□□□□□ -1.67
USP47-211ENST00000531513 RRP1P56182 461 aaKnown RBP4.59□□□□□ -1.67
USP47-211ENST00000531513 NANOS2P60321 138 aaKnown RBP4.59□□□□□ -1.67
USP47-211ENST00000531513 GHRHRQ02643 423 aa4.59□□□□□ -1.67
USP47-211ENST00000531513 ZBTB16Q05516 673 aa4.59□□□□□ -1.67
USP47-211ENST00000531513 SCARB2Q14108 478 aa4.59□□□□□ -1.67
USP47-211ENST00000531513 TXNDC8Q6A555 127 aa4.59□□□□□ -1.67
USP47-211ENST00000531513 HMBOX1Q6NT76 420 aa4.59□□□□□ -1.67
USP47-211ENST00000531513 TSSK4Q6SA08 328 aa4.59□□□□□ -1.67
USP47-211ENST00000531513 DCDC5Q6ZRR9 648 aa4.59□□□□□ -1.67
USP47-211ENST00000531513 DENND5BQ6ZUT9 1274 aa4.59□□□□□ -1.67
USP47-211ENST00000531513 GPAT4Q86UL3 456 aa4.59□□□□□ -1.67
USP47-211ENST00000531513 DNAAF5Q86Y56 855 aa4.59□□□□□ -1.67
USP47-211ENST00000531513 LINC00346Q8IVM7 164 aa4.59□□□□□ -1.67
USP47-211ENST00000531513 SYT2Q8N9I0 419 aaPredicted RBP4.59□□□□□ -1.67
USP47-211ENST00000531513 AVL9Q8NBF6 648 aa4.59□□□□□ -1.67
USP47-211ENST00000531513 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.59□□□□□ -1.67
USP47-211ENST00000531513 PRPF31Q8WWY3 499 aaKnown RBP4.59□□□□□ -1.67
USP47-211ENST00000531513 MMABQ96EY8 250 aaPredicted RBP4.59□□□□□ -1.67
USP47-211ENST00000531513 SAT2Q96F10 170 aaPredicted RBP4.59□□□□□ -1.67
USP47-211ENST00000531513 HIC2Q96JB3 615 aa4.59□□□□□ -1.67
USP47-211ENST00000531513 GCNAQ96QF7 691 aa4.59□□□□□ -1.67
USP47-211ENST00000531513 ZNF347Q96SE7 839 aa4.59□□□□□ -1.67
USP47-211ENST00000531513 NCAPGQ9BPX3 1015 aa4.59□□□□□ -1.67
USP47-211ENST00000531513 EDEM3Q9BZQ6 932 aa4.59□□□□□ -1.67
USP47-211ENST00000531513 FOXP1Q9H334 677 aaPredicted RBP4.59□□□□□ -1.67
USP47-211ENST00000531513 ZWILCHQ9H900 591 aa4.59□□□□□ -1.67
USP47-211ENST00000531513 ERVMER34-1Q9H9K5 563 aa4.59□□□□□ -1.67
USP47-211ENST00000531513 ATP8A2Q9NTI2 1148 aa4.59□□□□□ -1.67
USP47-211ENST00000531513 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.59□□□□□ -1.67
USP47-211ENST00000531513 TAB2Q9NYJ8 693 aa4.59□□□□□ -1.67
USP47-211ENST00000531513 DLGAP2Q9P1A6 1054 aa4.59□□□□□ -1.67
USP47-211ENST00000531513 FBXO40Q9UH90 709 aa4.59□□□□□ -1.67
USP47-211ENST00000531513 ICKQ9UPZ9 632 aa4.59□□□□□ -1.67
USP47-211ENST00000531513 PCDHGB5Q9Y5G0 923 aa4.59□□□□□ -1.67
USP47-211ENST00000531513 SOS1Q07889 1333 aaPredicted RBP4.58□□□□□ -1.68
USP47-211ENST00000531513 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.58□□□□□ -1.68
USP47-211ENST00000531513 TARSL2A2RTX5 802 aaKnown RBP4.58□□□□□ -1.68
USP47-211ENST00000531513 USP17L23D6RBM5 183 aa4.58□□□□□ -1.68
USP47-211ENST00000531513 SNAP23O00161 211 aa4.58□□□□□ -1.68
USP47-211ENST00000531513 CTDSP2O14595 271 aa4.58□□□□□ -1.68
USP47-211ENST00000531513 ALPLP05186 524 aa4.58□□□□□ -1.68
USP47-211ENST00000531513 QDPRP09417 244 aa4.58□□□□□ -1.68
USP47-211ENST00000531513 POU1F1P28069 291 aa4.58□□□□□ -1.68
USP47-211ENST00000531513 NRIP1P48552 1158 aa4.58□□□□□ -1.68
USP47-211ENST00000531513 HTR6P50406 440 aa4.58□□□□□ -1.68
USP47-211ENST00000531513 YWHAZP63104 245 aaKnown RBP4.58□□□□□ -1.68
USP47-211ENST00000531513 RHAGQ02094 409 aa4.58□□□□□ -1.68
USP47-211ENST00000531513 KCNB1Q14721 858 aa4.58□□□□□ -1.68
USP47-211ENST00000531513 RNPS1Q15287 305 aaKnown RBP4.58□□□□□ -1.68
USP47-211ENST00000531513 HIST2H2ACQ16777 129 aaPredicted RBP4.58□□□□□ -1.68
USP47-211ENST00000531513 ANXA2RQ3ZCQ2 193 aa4.58□□□□□ -1.68
USP47-211ENST00000531513 LEXMQ3ZCV2 418 aa4.58□□□□□ -1.68
USP47-211ENST00000531513 PLK5Q496M5 336 aa4.58□□□□□ -1.68
USP47-211ENST00000531513 ARL13AQ5H913 290 aaPredicted RBP4.58□□□□□ -1.68
USP47-211ENST00000531513 TCP11X2Q5H9J9 407 aa4.58□□□□□ -1.68
USP47-211ENST00000531513 C10orf76Q5T2E6 689 aa4.58□□□□□ -1.68
USP47-211ENST00000531513 TMEM268Q5VZI3 342 aa4.58□□□□□ -1.68
USP47-211ENST00000531513 ADALQ6DHV7 355 aa4.58□□□□□ -1.68
USP47-211ENST00000531513 JADE1Q6IE81 842 aa4.58□□□□□ -1.68
USP47-211ENST00000531513 TMEM65Q6PI78 240 aa4.58□□□□□ -1.68
USP47-211ENST00000531513 ZNF474Q6S9Z5 364 aaPredicted RBP4.58□□□□□ -1.68
USP47-211ENST00000531513 FAM47EQ6ZV65 393 aa4.58□□□□□ -1.68
USP47-211ENST00000531513 PIP4P1Q86T03 277 aa4.58□□□□□ -1.68
USP47-211ENST00000531513 KLBQ86Z14 1044 aa4.58□□□□□ -1.68
USP47-211ENST00000531513 RFX6Q8HWS3 928 aa4.58□□□□□ -1.68
USP47-211ENST00000531513 POGLUT1Q8NBL1 392 aa4.58□□□□□ -1.68
USP47-211ENST00000531513 PGAP3Q96FM1 320 aaPredicted RBP4.58□□□□□ -1.68
USP47-211ENST00000531513 P2RY11Q96G91 374 aa4.58□□□□□ -1.68
USP47-211ENST00000531513 CCDC34Q96HJ3 373 aa4.58□□□□□ -1.68
USP47-211ENST00000531513 GATA5Q9BWX5 397 aaPredicted RBP4.58□□□□□ -1.68
USP47-211ENST00000531513 ASAH2Q9NR71 780 aa4.58□□□□□ -1.68
USP47-211ENST00000531513 ABI3Q9P2A4 366 aa4.58□□□□□ -1.68
USP47-211ENST00000531513 FBXL17Q9UF56 701 aa4.58□□□□□ -1.68
USP47-211ENST00000531513 FBXO4Q9UKT5 387 aa4.58□□□□□ -1.68
USP47-211ENST00000531513 NENFQ9UMX5 172 aa4.58□□□□□ -1.68
USP47-211ENST00000531513 RPGRIP1LQ68CZ1 1315 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 ADGRF5Q8IZF2 1346 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 OR2A25A4D2G3 310 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 FAM90A8PA6NJQ4 464 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 CD8B2A6NJW9 211 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 GLOD5A6NK44 160 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 A8MXE2 369 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 IFNL4K9M1U5 179 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 GCATO75600 419 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 IL1AP01583 271 aa4.57□□□□□ -1.68
USP47-211ENST00000531513 AFPP02771 609 aaKnown RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms