RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 LRMPQ12912 555 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 MTX1Q13505 466 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 CUL4AQ13619 759 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 BMPR2Q13873 1038 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 PUM3Q15397 648 aaKnown RBP4.09□□□□□ -1.75
CTR9-205ENST00000529898 NFE2Q16621 373 aaPredicted RBP4.09□□□□□ -1.75
CTR9-205ENST00000529898 RGS21Q2M5E4 152 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 GRAMD1BQ3KR37 738 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 GLE1Q53GS7 698 aaKnown RBP4.09□□□□□ -1.75
CTR9-205ENST00000529898 TDRD12Q587J7 1177 aaKnown RBP4.09□□□□□ -1.75
CTR9-205ENST00000529898 HERC4Q5GLZ8 1057 aaPredicted RBP4.09□□□□□ -1.75
CTR9-205ENST00000529898 AARS2Q5JTZ9 985 aaKnown RBP4.09□□□□□ -1.75
CTR9-205ENST00000529898 FAM173BQ6P4H8 233 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 TMEM154Q6P9G4 183 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 SHQ1Q6PI26 577 aaKnown RBP4.09□□□□□ -1.75
CTR9-205ENST00000529898 TRIM65Q6PJ69 517 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 KDELC1Q6UW63 502 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 HEATR3Q7Z4Q2 680 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 PATL1Q86TB9 770 aaKnown RBP4.09□□□□□ -1.75
CTR9-205ENST00000529898 NLRP14Q86W24 1093 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 STX12Q86Y82 276 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 PM20D2Q8IYS1 436 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 ZBED8Q8IZ13 594 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 TCP11L2Q8N4U5 519 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 CCDC63Q8NA47 563 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 MLKLQ8NB16 471 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 PJA1Q8NG27 643 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 SLC2A14Q8TDB8 520 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 ZNF473Q8WTR7 871 aaKnown RBP4.09□□□□□ -1.75
CTR9-205ENST00000529898 EME1Q96AY2 570 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 FKBP10Q96AY3 582 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 RGMAQ96B86 450 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 FAM136AQ96C01 138 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 METTL2AQ96IZ6 378 aaKnown RBP4.09□□□□□ -1.75
CTR9-205ENST00000529898 SPATA17Q96L03 361 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 ATP6V1G3Q96LB4 118 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 NUDCD1Q96RS6 583 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 NUP88Q99567 741 aaPredicted RBP4.09□□□□□ -1.75
CTR9-205ENST00000529898 AP1M1Q9BXS5 423 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 RHOBTB2Q9BYZ6 727 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 CRNKL1Q9BZJ0 848 aaKnown RBP4.09□□□□□ -1.75
CTR9-205ENST00000529898 TRIM15Q9C019 465 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 C6orf62Q9GZU0 229 aaPredicted RBP4.09□□□□□ -1.75
CTR9-205ENST00000529898 ADNPQ9H2P0 1102 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 MROH8Q9H579 483 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 DENND2DQ9H6A0 471 aaPredicted RBP4.09□□□□□ -1.75
CTR9-205ENST00000529898 PALMDQ9NP74 551 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 ABCF3Q9NUQ8 709 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 DDX19AQ9NUU7 478 aaKnown RBP4.09□□□□□ -1.75
CTR9-205ENST00000529898 EXTL2Q9UBQ6 330 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 AMACRQ9UHK6 382 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 DNAJC16Q9Y2G8 782 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 TBC1D30Q9Y2I9 924 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 MROH7Q68CQ1 1323 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 TTC21BQ7Z4L5 1316 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 POGZQ7Z3K3 1410 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 PTPRMP28827 1452 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 DIP2CQ9Y2E4 1556 aa4.09□□□□□ -1.75
CTR9-205ENST00000529898 XRN1Q8IZH2 1706 aaKnown RBP4.09□□□□□ -1.76
CTR9-205ENST00000529898 CRYBG1Q9Y4K1 1723 aa4.09□□□□□ -1.76
CTR9-205ENST00000529898 CHD2O14647 1828 aaKnown RBP4.09□□□□□ -1.76
CTR9-205ENST00000529898 A0A1B0GVL5 298 aa4.08□□□□□ -1.76
CTR9-205ENST00000529898 ANO9A1A5B4 782 aa4.08□□□□□ -1.76
CTR9-205ENST00000529898 BCL9O00512 1426 aa4.08□□□□□ -1.76
CTR9-205ENST00000529898 PFDN6O15212 129 aa4.08□□□□□ -1.76
CTR9-205ENST00000529898 AP5Z1O43299 807 aa4.08□□□□□ -1.76
CTR9-205ENST00000529898 HNRNPRO43390 633 aaKnown RBP4.08□□□□□ -1.76
CTR9-205ENST00000529898 STX6O43752 255 aa4.08□□□□□ -1.76
CTR9-205ENST00000529898 DTNBO60941 627 aa4.08□□□□□ -1.76
CTR9-205ENST00000529898 CNOT3O75175 753 aaKnown RBP4.08□□□□□ -1.76
CTR9-205ENST00000529898 GMNNO75496 209 aa4.08□□□□□ -1.76
CTR9-205ENST00000529898 JRKO75564 520 aa4.08□□□□□ -1.76
CTR9-205ENST00000529898 PALMO75781 387 aa4.08□□□□□ -1.76
CTR9-205ENST00000529898 UFL1O94874 794 aa4.08□□□□□ -1.76
CTR9-205ENST00000529898 SNX4O95219 450 aa4.08□□□□□ -1.76
CTR9-205ENST00000529898 TTLL1O95922 423 aa4.08□□□□□ -1.76
CTR9-205ENST00000529898 ASS1P00966 412 aaKnown RBP4.08□□□□□ -1.76
CTR9-205ENST00000529898 FYNP06241 537 aa4.08□□□□□ -1.76
CTR9-205ENST00000529898 RHOP08100 348 aa4.08□□□□□ -1.76
CTR9-205ENST00000529898 KRT7P08729 469 aa4.08□□□□□ -1.76
CTR9-205ENST00000529898 TRIM27P14373 513 aa4.08□□□□□ -1.76
CTR9-205ENST00000529898 JUPP14923 745 aa4.08□□□□□ -1.76
CTR9-205ENST00000529898 GLULP15104 373 aa4.08□□□□□ -1.76
CTR9-205ENST00000529898 GAP43P17677 238 aa4.08□□□□□ -1.76
CTR9-205ENST00000529898 ITGALP20701 1170 aa4.08□□□□□ -1.76
CTR9-205ENST00000529898 DRD4P21917 467 aa4.08□□□□□ -1.76
CTR9-205ENST00000529898 TYK2P29597 1187 aa4.08□□□□□ -1.76
CTR9-205ENST00000529898 GNA11P29992 359 aa4.08□□□□□ -1.76
CTR9-205ENST00000529898 PKLRP30613 574 aa4.08□□□□□ -1.76
CTR9-205ENST00000529898 HOXA6P31267 233 aa4.08□□□□□ -1.76
CTR9-205ENST00000529898 IFNA8P32881 189 aa4.08□□□□□ -1.76
CTR9-205ENST00000529898 PCK1P35558 622 aa4.08□□□□□ -1.76
CTR9-205ENST00000529898 GSSP48637 474 aa4.08□□□□□ -1.76
CTR9-205ENST00000529898 PTDSS1P48651 473 aaKnown RBP4.08□□□□□ -1.76
CTR9-205ENST00000529898 ARHGDIBP52566 201 aa4.08□□□□□ -1.76
CTR9-205ENST00000529898 EIF4A1P60842 406 aaKnown RBP4.08□□□□□ -1.76
CTR9-205ENST00000529898 ATP6V0D1P61421 351 aa4.08□□□□□ -1.76
CTR9-205ENST00000529898 PRKCEQ02156 737 aa4.08□□□□□ -1.76
CTR9-205ENST00000529898 SRSF4Q08170 494 aaKnown RBP4.08□□□□□ -1.76
CTR9-205ENST00000529898 SMARCB1Q12824 385 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms