RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 HADHAP40939 763 aa4.79□□□□□ -1.64
C11orf88-204ENST00000529661 DPP6P42658 865 aa4.79□□□□□ -1.64
C11orf88-204ENST00000529661 GABRB2P47870 512 aa4.79□□□□□ -1.64
C11orf88-204ENST00000529661 PGGT1BP53609 377 aa4.79□□□□□ -1.64
C11orf88-204ENST00000529661 TMPRSS3P57727 454 aa4.79□□□□□ -1.64
C11orf88-204ENST00000529661 MED22Q15528 200 aa4.79□□□□□ -1.64
C11orf88-204ENST00000529661 RUSC1-AS1Q66K80 236 aa4.79□□□□□ -1.64
C11orf88-204ENST00000529661 TTI2Q6NXR4 508 aa4.79□□□□□ -1.64
C11orf88-204ENST00000529661 CPLX2Q6PUV4 134 aaKnown RBP4.79□□□□□ -1.64
C11orf88-204ENST00000529661 CYP20A1Q6UW02 462 aa4.79□□□□□ -1.64
C11orf88-204ENST00000529661 PARM1Q6UWI2 310 aa4.79□□□□□ -1.64
C11orf88-204ENST00000529661 CTU1Q7Z7A3 348 aaKnown RBP4.79□□□□□ -1.64
C11orf88-204ENST00000529661 GPAT4Q86UL3 456 aa4.79□□□□□ -1.64
C11orf88-204ENST00000529661 ZDHHC23Q8IYP9 409 aa4.79□□□□□ -1.64
C11orf88-204ENST00000529661 OR8H2Q8N162 312 aa4.79□□□□□ -1.64
C11orf88-204ENST00000529661 WDTC1Q8N5D0 677 aa4.79□□□□□ -1.64
C11orf88-204ENST00000529661 PDILTQ8N807 584 aa4.79□□□□□ -1.64
C11orf88-204ENST00000529661 C7orf57Q8NEG2 295 aa4.79□□□□□ -1.64
C11orf88-204ENST00000529661 SCFD2Q8WU76 684 aa4.79□□□□□ -1.64
C11orf88-204ENST00000529661 ISCUQ9H1K1 167 aa4.79□□□□□ -1.64
C11orf88-204ENST00000529661 HIPK2Q9H2X6 1198 aa4.79□□□□□ -1.64
C11orf88-204ENST00000529661 PLEKHA4Q9H4M7 779 aa4.79□□□□□ -1.64
C11orf88-204ENST00000529661 ACTR5Q9H9F9 607 aaPredicted RBP4.79□□□□□ -1.64
C11orf88-204ENST00000529661 PLSCR4Q9NRQ2 329 aa4.79□□□□□ -1.64
C11orf88-204ENST00000529661 ANKEF1Q9NU02 776 aa4.79□□□□□ -1.64
C11orf88-204ENST00000529661 ADAM18Q9Y3Q7 739 aa4.79□□□□□ -1.64
C11orf88-204ENST00000529661 A0A1W2PQF6 199 aa4.78□□□□□ -1.64
C11orf88-204ENST00000529661 LRRC53A6NM62 1247 aa4.78□□□□□ -1.64
C11orf88-204ENST00000529661 MYO1GB0I1T2 1018 aa4.78□□□□□ -1.64
C11orf88-204ENST00000529661 BCAT2O15382 392 aaPredicted RBP4.78□□□□□ -1.64
C11orf88-204ENST00000529661 LIASO43766 372 aa4.78□□□□□ -1.64
C11orf88-204ENST00000529661 TMCC1O94876 653 aa4.78□□□□□ -1.64
C11orf88-204ENST00000529661 YWHAQP27348 245 aa4.78□□□□□ -1.64
C11orf88-204ENST00000529661 RYKP34925 604 aa4.78□□□□□ -1.64
C11orf88-204ENST00000529661 PSMB10P40306 273 aa4.78□□□□□ -1.64
C11orf88-204ENST00000529661 GNAQP50148 359 aa4.78□□□□□ -1.64
C11orf88-204ENST00000529661 RNPS1Q15287 305 aaKnown RBP4.78□□□□□ -1.64
C11orf88-204ENST00000529661 HIST2H2ACQ16777 129 aaPredicted RBP4.78□□□□□ -1.64
C11orf88-204ENST00000529661 DUSP28Q4G0W2 176 aa4.78□□□□□ -1.64
C11orf88-204ENST00000529661 RILPL1Q5EBL4 403 aa4.78□□□□□ -1.64
C11orf88-204ENST00000529661 SLC16A12Q6ZSM3 486 aa4.78□□□□□ -1.64
C11orf88-204ENST00000529661 FAM217AQ8IXS0 508 aa4.78□□□□□ -1.64
C11orf88-204ENST00000529661 DPP10Q8N608 796 aa4.78□□□□□ -1.64
C11orf88-204ENST00000529661 LRRC57Q8N9N7 239 aa4.78□□□□□ -1.64
C11orf88-204ENST00000529661 PSPC1Q8WXF1 523 aaKnown RBP4.78□□□□□ -1.64
C11orf88-204ENST00000529661 FAM149B1Q96BN6 582 aa4.78□□□□□ -1.64
C11orf88-204ENST00000529661 THOC3Q96J01 351 aaKnown RBP4.78□□□□□ -1.64
C11orf88-204ENST00000529661 SF3B5Q9BWJ5 86 aaKnown RBP4.78□□□□□ -1.64
C11orf88-204ENST00000529661 RNF146Q9NTX7 359 aa4.78□□□□□ -1.64
C11orf88-204ENST00000529661 NKIRAS2Q9NYR9 191 aa4.78□□□□□ -1.64
C11orf88-204ENST00000529661 HAO1Q9UJM8 370 aa4.78□□□□□ -1.64
C11orf88-204ENST00000529661 ZNF215Q9UL58 517 aaPredicted RBP4.78□□□□□ -1.64
C11orf88-204ENST00000529661 A0A1W2PRG0 241 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 FRMD3A2A2Y4 597 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 C17orf102A2RUQ5 167 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 GAGE12JA6NER3 117 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 DDTLA6NHG4 134 aaPredicted RBP4.77□□□□□ -1.65
C11orf88-204ENST00000529661 TTC36A6NLP5 189 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 LACTBL1A8MY62 500 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 IFNL4K9M1U5 179 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 EBAG9O00559 213 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 TSPAN9O75954 239 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 OR2C1O95371 312 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 KLKB1P03952 638 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 CYP1A2P05177 515 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 CSH1P0DML2 217 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 CSH2P0DML3 217 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 IRF1P10914 325 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 HOXB6P17509 224 aaKnown RBP4.77□□□□□ -1.65
C11orf88-204ENST00000529661 ARRB2P32121 409 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 ACSL1P33121 698 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 TTKP33981 857 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 ACTN2P35609 894 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 CLCNKBP51801 687 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 KRTAP10-9P60411 292 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 MC1RQ01726 317 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 WTAPQ15007 396 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 DPCR1Q3MIW9 517 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 Q5PR19 223 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 KIAA1161Q6NSJ0 714 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 KLHL35Q6PF15 583 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 KRBA2Q6ZNG9 492 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 Q6ZTK2 550 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 TMC8Q8IU68 726 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 ARHGAP12Q8IWW6 846 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 FAM185AQ8N0U4 392 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 CADM3Q8N126 398 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 FRMD1Q8N878 549 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 LSMEM1Q8N8F7 131 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 B4GALNT2Q8NHY0 566 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 OIT3Q8WWZ8 545 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 SMARCE1Q969G3 411 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 FAM120BQ96EK7 910 aaKnown RBP4.77□□□□□ -1.65
C11orf88-204ENST00000529661 WDFY2Q96P53 400 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 ZPBPQ9BS86 351 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 POLR1BQ9H9Y6 1135 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 FBRSL1Q9HCM7 1045 aaKnown RBP4.77□□□□□ -1.65
C11orf88-204ENST00000529661 ADD3Q9UEY8 706 aaKnown RBP4.77□□□□□ -1.65
C11orf88-204ENST00000529661 ZNF580Q9UK33 172 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 MKLN1Q9UL63 735 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms