RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 SHCBP1LQ9BZQ2 653 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 EML4Q9HC35 981 aaKnown RBP15.45■□□□□ 0.06
USH1C-207ENST00000527720 MARCH5Q9NX47 278 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 RIMKLBQ9ULI2 386 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 VWA7Q9Y334 891 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 NEMP1O14524 444 aa15.44■□□□□ 0.06
USH1C-207ENST00000527720 AURKAO14965 403 aa15.44■□□□□ 0.06
USH1C-207ENST00000527720 EPHB1P54762 984 aa15.44■□□□□ 0.06
USH1C-207ENST00000527720 PRAMEP78395 509 aa15.44■□□□□ 0.06
USH1C-207ENST00000527720 KLC1Q07866 573 aa15.44■□□□□ 0.06
USH1C-207ENST00000527720 IHHQ14623 411 aa15.44■□□□□ 0.06
USH1C-207ENST00000527720 HECTD2Q5U5R9 776 aa15.44■□□□□ 0.06
USH1C-207ENST00000527720 ALG1LQ6GMV1 187 aa15.44■□□□□ 0.06
USH1C-207ENST00000527720 PXYLP1Q8TE99 480 aa15.44■□□□□ 0.06
USH1C-207ENST00000527720 MOCOSQ96EN8 888 aa15.44■□□□□ 0.06
USH1C-207ENST00000527720 CYP4F11Q9HBI6 524 aa15.44■□□□□ 0.06
USH1C-207ENST00000527720 POMPQ9Y244 141 aa15.44■□□□□ 0.06
USH1C-207ENST00000527720 ARVCFO00192 962 aa15.43■□□□□ 0.06
USH1C-207ENST00000527720 ENPP3O14638 875 aa15.43■□□□□ 0.06
USH1C-207ENST00000527720 LDB2O43679 373 aa15.43■□□□□ 0.06
USH1C-207ENST00000527720 SMNDC1O75940 238 aaKnown RBP eCLIP15.43■□□□□ 0.06
USH1C-207ENST00000527720 IPO13O94829 963 aaKnown RBP15.43■□□□□ 0.06
USH1C-207ENST00000527720 WISP3O95389 354 aaPredicted RBP15.43■□□□□ 0.06
USH1C-207ENST00000527720 TACR2P21452 398 aa15.43■□□□□ 0.06
USH1C-207ENST00000527720 CYLC2Q14093 348 aaPredicted RBP15.43■□□□□ 0.06
USH1C-207ENST00000527720 ZNF789Q5FWF6 425 aa15.43■□□□□ 0.06
USH1C-207ENST00000527720 FAM45BPQ6NSW5 357 aa15.43■□□□□ 0.06
USH1C-207ENST00000527720 FUT10Q6P4F1 479 aa15.43■□□□□ 0.06
USH1C-207ENST00000527720 GPR150Q8NGU9 434 aa15.43■□□□□ 0.06
USH1C-207ENST00000527720 FAM45AQ8TCE6 357 aa15.43■□□□□ 0.06
USH1C-207ENST00000527720 IFT43Q96FT9 208 aa15.43■□□□□ 0.06
USH1C-207ENST00000527720 SERPINI1Q99574 410 aa15.43■□□□□ 0.06
USH1C-207ENST00000527720 SEPT5Q99719 369 aaPredicted RBP15.43■□□□□ 0.06
USH1C-207ENST00000527720 TMEM175Q9BSA9 504 aa15.43■□□□□ 0.06
USH1C-207ENST00000527720 VPS28Q9UK41 221 aa15.43■□□□□ 0.06
USH1C-207ENST00000527720 SLC27A5Q9Y2P5 690 aa15.43■□□□□ 0.06
USH1C-207ENST00000527720 F5H5T6 163 aa15.43■□□□□ 0.06
USH1C-207ENST00000527720 HOXA2O43364 376 aa15.43■□□□□ 0.06
USH1C-207ENST00000527720 TLR5O60602 858 aa15.43■□□□□ 0.06
USH1C-207ENST00000527720 SOAT2O75908 522 aa15.43■□□□□ 0.06
USH1C-207ENST00000527720 VNN2O95498 520 aa15.43■□□□□ 0.06
USH1C-207ENST00000527720 S1PR4O95977 384 aa15.43■□□□□ 0.06
USH1C-207ENST00000527720 HMBSP08397 361 aa15.43■□□□□ 0.06
USH1C-207ENST00000527720 CCDC166P0CW27 439 aa15.43■□□□□ 0.06
USH1C-207ENST00000527720 ARPP19P56211 112 aa15.43■□□□□ 0.06
USH1C-207ENST00000527720 ZNF235Q14590 738 aa15.43■□□□□ 0.06
USH1C-207ENST00000527720 RNF19BQ6ZMZ0 732 aa15.43■□□□□ 0.06
USH1C-207ENST00000527720 ANKS3Q6ZW76 656 aa15.43■□□□□ 0.06
USH1C-207ENST00000527720 PTAR1Q7Z6K3 402 aaPredicted RBP15.43■□□□□ 0.06
USH1C-207ENST00000527720 SPATA6LQ8N4H0 392 aa15.43■□□□□ 0.06
USH1C-207ENST00000527720 KYQ8NBH2 561 aa15.43■□□□□ 0.06
USH1C-207ENST00000527720 OR6P1Q8NGX9 317 aa15.43■□□□□ 0.06
USH1C-207ENST00000527720 HDAC10Q969S8 669 aa15.43■□□□□ 0.06
USH1C-207ENST00000527720 NDNQ99608 321 aa15.43■□□□□ 0.06
USH1C-207ENST00000527720 SEMA3CQ99985 751 aa15.43■□□□□ 0.06
USH1C-207ENST00000527720 TTLL2Q9BWV7 592 aa15.43■□□□□ 0.06
USH1C-207ENST00000527720 OSBPL1AQ9BXW6 950 aa15.43■□□□□ 0.06
USH1C-207ENST00000527720 SEZ6LQ9BYH1 1024 aa15.43■□□□□ 0.06
USH1C-207ENST00000527720 PDFQ9HBH1 243 aa15.43■□□□□ 0.06
USH1C-207ENST00000527720 ZBTB26Q9HCK0 441 aa15.43■□□□□ 0.06
USH1C-207ENST00000527720 TRPC7Q9HCX4 862 aa15.43■□□□□ 0.06
USH1C-207ENST00000527720 PPM1HQ9ULR3 514 aa15.43■□□□□ 0.06
USH1C-207ENST00000527720 SLC11A1P49279 550 aa15.42■□□□□ 0.06
USH1C-207ENST00000527720 NOGQ13253 232 aa15.42■□□□□ 0.06
USH1C-207ENST00000527720 CCNIQ14094 377 aa15.42■□□□□ 0.06
USH1C-207ENST00000527720 NADSYN1Q6IA69 706 aa15.42■□□□□ 0.06
USH1C-207ENST00000527720 SNX32Q86XE0 403 aa15.42■□□□□ 0.06
USH1C-207ENST00000527720 BBS5Q8N3I7 341 aa15.42■□□□□ 0.06
USH1C-207ENST00000527720 CEP70Q8NHQ1 597 aa15.42■□□□□ 0.06
USH1C-207ENST00000527720 TTC1Q99614 292 aa15.42■□□□□ 0.06
USH1C-207ENST00000527720 LBHD1Q9BQE6 289 aaPredicted RBP15.42■□□□□ 0.06
USH1C-207ENST00000527720 TRMOQ9BU70 441 aa15.42■□□□□ 0.06
USH1C-207ENST00000527720 MRPL9Q9BYD2 267 aaKnown RBP15.42■□□□□ 0.06
USH1C-207ENST00000527720 MAGEH1Q9H213 219 aa15.42■□□□□ 0.06
USH1C-207ENST00000527720 CRISPLD1Q9H336 500 aa15.42■□□□□ 0.06
USH1C-207ENST00000527720 A8MT66 165 aa15.42■□□□□ 0.06
USH1C-207ENST00000527720 PDE5AO76074 875 aa15.42■□□□□ 0.06
USH1C-207ENST00000527720 BFSP2Q13515 415 aa15.42■□□□□ 0.06
USH1C-207ENST00000527720 APLFQ8IW19 511 aaPredicted RBP15.42■□□□□ 0.06
USH1C-207ENST00000527720 REM2Q8IYK8 340 aaPredicted RBP15.42■□□□□ 0.06
USH1C-207ENST00000527720 BRSK1Q8TDC3 778 aa15.42■□□□□ 0.06
USH1C-207ENST00000527720 VCX3BQ9H321 246 aa15.42■□□□□ 0.06
USH1C-207ENST00000527720 CCSER2Q9H7U1 834 aa15.42■□□□□ 0.06
USH1C-207ENST00000527720 POPDC3Q9HBV1 291 aa15.42■□□□□ 0.06
USH1C-207ENST00000527720 ACSS2Q9NR19 701 aa15.42■□□□□ 0.06
USH1C-207ENST00000527720 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.42■□□□□ 0.06
USH1C-207ENST00000527720 STK39Q9UEW8 545 aa15.42■□□□□ 0.06
USH1C-207ENST00000527720 A6NHS1 94 aa15.41■□□□□ 0.06
USH1C-207ENST00000527720 SLC38A8A6NNN8 435 aa15.41■□□□□ 0.06
USH1C-207ENST00000527720 SDHDO14521 159 aa15.41■□□□□ 0.06
USH1C-207ENST00000527720 ZMPSTE24O75844 475 aa15.41■□□□□ 0.06
USH1C-207ENST00000527720 BAG2O95816 211 aa15.41■□□□□ 0.06
USH1C-207ENST00000527720 GLP2RO95838 553 aa15.41■□□□□ 0.06
USH1C-207ENST00000527720 ACVRL1P37023 503 aa15.41■□□□□ 0.06
USH1C-207ENST00000527720 ETFBP38117 255 aa15.41■□□□□ 0.06
USH1C-207ENST00000527720 NUDT2P50583 147 aa15.41■□□□□ 0.06
USH1C-207ENST00000527720 ARSDP51689 593 aa15.41■□□□□ 0.06
USH1C-207ENST00000527720 DSG1Q02413 1049 aa15.41■□□□□ 0.06
USH1C-207ENST00000527720 PDCD2Q16342 344 aaPredicted RBP15.41■□□□□ 0.06
USH1C-207ENST00000527720 GSTA3Q16772 222 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms