RNA–Protein interactions for RNA: ENST00000524813.2

PCDHB18P-201, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 2,368 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-201ENST00000524813 C2orf69Q8N8R5 385 aa18.32■□□□□ 0.52
PCDHB18P-201ENST00000524813 BEST2Q8NFU1 509 aa18.32■□□□□ 0.52
PCDHB18P-201ENST00000524813 HDAC11Q96DB2 347 aa18.32■□□□□ 0.52
PCDHB18P-201ENST00000524813 TEKT5Q96M29 485 aa18.32■□□□□ 0.52
PCDHB18P-201ENST00000524813 CDHR5Q9HBB8 845 aa18.32■□□□□ 0.52
PCDHB18P-201ENST00000524813 CHST12Q9NRB3 414 aa18.32■□□□□ 0.52
PCDHB18P-201ENST00000524813 A0A087X1B8 175 aa18.31■□□□□ 0.52
PCDHB18P-201ENST00000524813 TRIM64A6NGJ6 449 aa18.31■□□□□ 0.52
PCDHB18P-201ENST00000524813 I6L893 689 aaPredicted RBP18.31■□□□□ 0.52
PCDHB18P-201ENST00000524813 TPST1O60507 370 aa18.31■□□□□ 0.52
PCDHB18P-201ENST00000524813 CLIC3O95833 236 aa18.31■□□□□ 0.52
PCDHB18P-201ENST00000524813 GJA9P57773 515 aa18.31■□□□□ 0.52
PCDHB18P-201ENST00000524813 CSHL1Q14406 222 aa18.31■□□□□ 0.52
PCDHB18P-201ENST00000524813 RAB39AQ14964 217 aa18.31■□□□□ 0.52
PCDHB18P-201ENST00000524813 SLC36A3Q495N2 470 aa18.31■□□□□ 0.52
PCDHB18P-201ENST00000524813 PCID2Q5JVF3 399 aa18.31■□□□□ 0.52
PCDHB18P-201ENST00000524813 XKR5Q6UX68 686 aa18.31■□□□□ 0.52
PCDHB18P-201ENST00000524813 RNF135Q8IUD6 432 aa18.31■□□□□ 0.52
PCDHB18P-201ENST00000524813 SPPL2CQ8IUH8 684 aa18.31■□□□□ 0.52
PCDHB18P-201ENST00000524813 LINC01465Q8N7H1 131 aa18.31■□□□□ 0.52
PCDHB18P-201ENST00000524813 CYGBQ8WWM9 190 aa18.31■□□□□ 0.52
PCDHB18P-201ENST00000524813 RSPH1Q8WYR4 309 aa18.31■□□□□ 0.52
PCDHB18P-201ENST00000524813 LRCH3Q96II8 777 aa18.31■□□□□ 0.52
PCDHB18P-201ENST00000524813 MTF2Q9Y483 593 aaPredicted RBP18.31■□□□□ 0.52
PCDHB18P-201ENST00000524813 RNF103-CHMP3A0A140T963 221 aa18.31■□□□□ 0.52
PCDHB18P-201ENST00000524813 TXNP10599 105 aaKnown RBP18.31■□□□□ 0.52
PCDHB18P-201ENST00000524813 CD247P20963 164 aa18.31■□□□□ 0.52
PCDHB18P-201ENST00000524813 DCKP27707 260 aa18.31■□□□□ 0.52
PCDHB18P-201ENST00000524813 SLC1A2P43004 574 aa18.31■□□□□ 0.52
PCDHB18P-201ENST00000524813 TGFBIQ15582 683 aa18.31■□□□□ 0.52
PCDHB18P-201ENST00000524813 FGD3Q5JSP0 725 aa18.31■□□□□ 0.52
PCDHB18P-201ENST00000524813 AARS2Q5JTZ9 985 aaKnown RBP18.31■□□□□ 0.52
PCDHB18P-201ENST00000524813 ESRP1Q6NXG1 681 aaKnown RBP18.31■□□□□ 0.52
PCDHB18P-201ENST00000524813 TMEM26Q6ZUK4 368 aa18.31■□□□□ 0.52
PCDHB18P-201ENST00000524813 ZNF420Q8TAQ5 688 aaPredicted RBP18.31■□□□□ 0.52
PCDHB18P-201ENST00000524813 USP33Q8TEY7 942 aa18.31■□□□□ 0.52
PCDHB18P-201ENST00000524813 ZUFSPQ96AP4 578 aa18.31■□□□□ 0.52
PCDHB18P-201ENST00000524813 FBXL20Q96IG2 436 aa18.31■□□□□ 0.52
PCDHB18P-201ENST00000524813 DOK1Q99704 481 aa18.31■□□□□ 0.52
PCDHB18P-201ENST00000524813 IL1RL2Q9HB29 575 aa18.31■□□□□ 0.52
PCDHB18P-201ENST00000524813 PFDN4Q9NQP4 134 aa18.31■□□□□ 0.52
PCDHB18P-201ENST00000524813 IGSF5Q9NSI5 407 aa18.31■□□□□ 0.52
PCDHB18P-201ENST00000524813 GJD2Q9UKL4 321 aa18.31■□□□□ 0.52
PCDHB18P-201ENST00000524813 DERAQ9Y315 318 aa18.31■□□□□ 0.52
PCDHB18P-201ENST00000524813 MCM3APO60318 1980 aa18.31■□□□□ 0.52
PCDHB18P-201ENST00000524813 DHRS12A0PJE2 317 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 A8MT66 165 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 AP3B1O00203 1094 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 CLDN5O00501 218 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 BEST1O76090 585 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 KPNA2P52292 529 aaKnown RBP18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 PLK1P53350 603 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 SLC12A2P55011 1212 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 C21orf59P57076 290 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 GALNT2Q10471 571 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 SEMA3BQ13214 749 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 ZBTB6Q15916 424 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 LINC00523Q86TU6 105 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 RETREG3Q86VR2 466 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 SPATA22Q8NHS9 363 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 PLEKHA8Q96JA3 519 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 SNX27Q96L92 541 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 NAA50Q9GZZ1 169 aaKnown RBP18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 BRD8Q9H0E9 1235 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 POLR1BQ9H9Y6 1135 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 PLEKHA5Q9HAU0 1116 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 FBRSL1Q9HCM7 1045 aaKnown RBP18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 AGPAT4Q9NRZ5 378 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 COQ6Q9Y2Z9 468 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 ATP6AP2A0A1C7CYW4 349 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 PDHXO00330 501 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 NME4O00746 187 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 SPTLC1O15269 473 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 ATP6AP2O75787 350 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 ARNTP27540 789 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 ARCN1P48444 511 aaKnown RBP18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 RELAQ04206 551 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 LAMC2Q13753 1193 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 FUNDC1Q8IVP5 155 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 DDHD1Q8NEL9 900 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 ROPN1LQ96C74 230 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 MS4A4AQ96JQ5 239 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 SLC2A13Q96QE2 648 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 VAT1Q99536 393 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 MPHOSPH6Q99547 160 aaKnown RBP18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 PDGFCQ9NRA1 345 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 INIPQ9NRY2 104 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 SLC2A6Q9UGQ3 507 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 EGFL7Q9UHF1 273 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 DOLKQ9UPQ8 538 aa18.3■□□□□ 0.52
PCDHB18P-201ENST00000524813 PLXNA1Q9UIW2 1896 aa18.29■□□□□ 0.52
PCDHB18P-201ENST00000524813 IPO13O94829 963 aaKnown RBP18.29■□□□□ 0.52
PCDHB18P-201ENST00000524813 ZBTB11O95625 1053 aaPredicted RBP18.29■□□□□ 0.52
PCDHB18P-201ENST00000524813 IL10P22301 178 aa18.29■□□□□ 0.52
PCDHB18P-201ENST00000524813 UGT1A1P22309 533 aa18.29■□□□□ 0.52
PCDHB18P-201ENST00000524813 UGT1A4P22310 534 aa18.29■□□□□ 0.52
PCDHB18P-201ENST00000524813 UGT1A3P35503 534 aa18.29■□□□□ 0.52
PCDHB18P-201ENST00000524813 UGT1A5P35504 534 aa18.29■□□□□ 0.52
PCDHB18P-201ENST00000524813 RAB15P59190 212 aa18.29■□□□□ 0.52
PCDHB18P-201ENST00000524813 INPP5AQ14642 412 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms