RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 GALTP07902 379 aa3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 POU1F1P28069 291 aa3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 CDC25AP30304 524 aa3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 ABCD1P33897 745 aa3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 RYKP34925 604 aa3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 POLGP54098 1239 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 TERF1P54274 439 aa3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 CASP6P55212 293 aa3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 RIPK4P57078 832 aa3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 ADORA2A-AS1P86434 159 aa3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 RUNX2Q13950 521 aa3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 VEPH1Q14D04 833 aa3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 HIST2H2ACQ16777 129 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 ZNF260Q3ZCT1 412 aa3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 CPLX2Q6PUV4 134 aaKnown RBP3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 Q6ZTK2 550 aa3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 MOB3CQ70IA8 216 aa3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 TRILQ7L0X0 811 aa3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 CTU1Q7Z7A3 348 aaKnown RBP3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 ZUFSPQ96AP4 578 aa3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 URB1-AS1Q96HZ7 61 aa3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 MPP4Q96JB8 637 aa3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 YME1L1Q96TA2 773 aa3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 H2AFJQ9BTM1 129 aa3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 MSTO1Q9BUK6 570 aa3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 LHPPQ9H008 270 aa3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 TTYH1Q9H313 450 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 NDRG3Q9UGV2 375 aa3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 SARDHQ9UL12 918 aa3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 ADCY10Q96PN6 1610 aa3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 ZMYM4Q5VZL5 1548 aa3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 ARHGEF12Q9NZN5 1544 aa3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 E9PCH4 1651 aa3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 ABCA8O94911 1581 aa3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 ATP10AO60312 1499 aa3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 CAMSAP2Q08AD1 1489 aa3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 GPRASP1Q5JY77 1395 aa3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 A0A1W2PQM1 296 aa3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 SERINC4A6NH21 518 aa3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 OR6C75A6NL08 312 aa3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 TAF4O00268 1085 aa3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 TNFRSF13BO14836 293 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 ASAP2O43150 1006 aa3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 LDB2O43679 373 aa3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 LIASO43766 372 aa3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 TACC1O75410 805 aa3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 MTA2O94776 668 aa3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 TMEM63AO94886 807 aa3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 SOX30O94993 753 aa3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 LCATP04180 440 aa3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 KRT10P13645 584 aa3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 EPHA8P29322 1005 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 HOXD3P31249 432 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 EIF3BP55884 814 aaKnown RBP3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 MPP1Q00013 466 aa3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 ODF3L2Q3SX64 289 aa3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 SLC9B1Q4ZJI4 515 aa3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 FSCBQ5H9T9 825 aa3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 C9orf47Q6ZRZ4 202 aa3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 H1FNTQ75WM6 255 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 MON1BQ7L1V2 547 aa3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 ZNF367Q7RTV3 350 aa3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 GPAT4Q86UL3 456 aa3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 EVI5LQ96CN4 794 aa3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 KLHL29Q96CT2 875 aa3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 MPHOSPH8Q99549 860 aa3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 NPFFR1Q9GZQ6 430 aa3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 BRF2Q9HAW0 419 aa3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 C20orf141Q9NUB4 165 aa3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 TAS2R10Q9NYW0 307 aa3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 HSPB7Q9UBY9 170 aa3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 FZD10Q9ULW2 581 aa3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 BCORL1Q5H9F3 1711 aa3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 KDM3AQ9Y4C1 1321 aa3.43□□□□□ -1.86
HMGB1P41-201ENST00000520234 ARHGEF5Q12774 1597 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 PLB1Q6P1J6 1458 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 BRD4O60885 1362 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 NUP155O75694 1391 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 A0A1W2PPH5 198 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 BECN2A8MW95 431 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 B4E171 279 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 KLRF2D3W0D1 207 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 I6L893 689 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 TNFSF14O43557 240 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 RGS14O43566 566 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 HSP90AA1P07900 732 aaKnown RBP3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 TPM2P07951 284 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 HOXC6P09630 235 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 TFPIP10646 304 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 ATP1A3P13637 1013 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 NAGAP17050 411 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 SRD5A1P18405 259 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 CD53P19397 219 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 CPOXP36551 454 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 TSPAN7P41732 249 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 DSC1Q08554 894 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 TRAF2Q12933 501 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 GPS2Q13227 327 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 CAPSQ13938 189 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 GSTA3Q16772 222 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms