RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 CPNE5Q9HCH3 593 aa8.72□□□□□ -1.01
PABPC1-202ENST00000517403 FGF22Q9HCT0 170 aa8.72□□□□□ -1.01
PABPC1-202ENST00000517403 MRPL40Q9NQ50 206 aaKnown RBP8.72□□□□□ -1.01
PABPC1-202ENST00000517403 DYRK4Q9NR20 520 aa8.72□□□□□ -1.01
PABPC1-202ENST00000517403 CWC15Q9P013 229 aaKnown RBP8.72□□□□□ -1.01
PABPC1-202ENST00000517403 APOBEC3BQ9UH17 382 aaKnown RBP8.72□□□□□ -1.01
PABPC1-202ENST00000517403 TPX2Q9ULW0 747 aaKnown RBP8.72□□□□□ -1.01
PABPC1-202ENST00000517403 NENFQ9UMX5 172 aa8.72□□□□□ -1.01
PABPC1-202ENST00000517403 OR1A2Q9Y585 309 aa8.72□□□□□ -1.01
PABPC1-202ENST00000517403 ATRXP46100 2492 aa8.71□□□□□ -1.01
PABPC1-202ENST00000517403 ANKRD33BA6NCL7 494 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 TMEM202A6NGA9 273 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 CYSRT1A8MQ03 144 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 A8MX80 341 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 PYCARD-AS1I3L0S3 204 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 AGRPO00253 132 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 YY2O15391 372 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 TSPAN6O43657 245 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 CALB1P05937 261 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 CD48P09326 243 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 C1SP09871 688 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 ERCC2P18074 760 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 CR2P20023 1033 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 MIPP30301 263 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 EIF4A3P38919 411 aaKnown RBP8.71□□□□□ -1.02
PABPC1-202ENST00000517403 ABCG1P45844 678 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 RECQLP46063 649 aaPredicted RBP8.71□□□□□ -1.02
PABPC1-202ENST00000517403 SNX16P57768 344 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 TPI1P60174 286 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 GABREP78334 506 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 SKOR1P84550 965 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 DAB2P98082 770 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 SLC20A2Q08357 652 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 SLC10A7Q0GE19 358 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 TRAF2Q12933 501 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 MTA1Q13330 715 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 ILKQ13418 452 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 ISXQ2M1V0 245 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 SMTNL2Q2TAL5 461 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 TMEM52BQ4KMG9 183 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 PRRT3Q5FWE3 981 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 C3orf38Q5JPI3 329 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 EFHC2Q5JST6 749 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 DESI1Q6ICB0 168 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 MACC1Q6ZN28 852 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 RFX8Q6ZV50 586 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 DENND6BQ8NEG7 585 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 PPP1R16AQ96I34 528 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 CCDC114Q96M63 670 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 USB1Q9BQ65 265 aaKnown RBP8.71□□□□□ -1.02
PABPC1-202ENST00000517403 DHX35Q9H5Z1 703 aaKnown RBP8.71□□□□□ -1.02
PABPC1-202ENST00000517403 DKK3Q9UBP4 350 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 SATB2Q9UPW6 733 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 PAXBP1Q9Y5B6 917 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 HS3ST3A1Q9Y663 406 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 AK5Q9Y6K8 562 aa8.71□□□□□ -1.02
PABPC1-202ENST00000517403 KNTC1P50748 2209 aa8.7□□□□□ -1.02
PABPC1-202ENST00000517403 ARHGEF17Q96PE2 2063 aaPredicted RBP8.7□□□□□ -1.02
PABPC1-202ENST00000517403 FASNP49327 2511 aaKnown RBP8.7□□□□□ -1.02
PABPC1-202ENST00000517403 A0A1B0GTH6 734 aa8.7□□□□□ -1.02
PABPC1-202ENST00000517403 CXorf51AA0A1B0GTR3 108 aa8.7□□□□□ -1.02
PABPC1-202ENST00000517403 CPED1A4D0V7 1026 aa8.7□□□□□ -1.02
PABPC1-202ENST00000517403 EME2A4GXA9 379 aaPredicted RBP8.7□□□□□ -1.02
PABPC1-202ENST00000517403 NTN3O00634 580 aaPredicted RBP8.7□□□□□ -1.02
PABPC1-202ENST00000517403 EFSO43281 561 aa8.7□□□□□ -1.02
PABPC1-202ENST00000517403 USP12O75317 370 aa8.7□□□□□ -1.02
PABPC1-202ENST00000517403 MAP3K6O95382 1288 aa8.7□□□□□ -1.02
PABPC1-202ENST00000517403 POP4O95707 220 aaKnown RBP8.7□□□□□ -1.02
PABPC1-202ENST00000517403 IGSF6O95976 241 aa8.7□□□□□ -1.02
PABPC1-202ENST00000517403 SOD1P00441 154 aa8.7□□□□□ -1.02
PABPC1-202ENST00000517403 PCCBP05166 539 aa8.7□□□□□ -1.02
PABPC1-202ENST00000517403 HGFP14210 728 aa8.7□□□□□ -1.02
PABPC1-202ENST00000517403 HOXB1P14653 301 aaPredicted RBP8.7□□□□□ -1.02
PABPC1-202ENST00000517403 WT1P19544 449 aaPredicted RBP8.7□□□□□ -1.02
PABPC1-202ENST00000517403 PSMA2P25787 234 aa8.7□□□□□ -1.02
PABPC1-202ENST00000517403 HNF1BP35680 557 aa8.7□□□□□ -1.02
PABPC1-202ENST00000517403 PRKCIP41743 596 aa8.7□□□□□ -1.02
PABPC1-202ENST00000517403 RABIFP47224 123 aa8.7□□□□□ -1.02
PABPC1-202ENST00000517403 LIG3P49916 1009 aa8.7□□□□□ -1.02
PABPC1-202ENST00000517403 ADKP55263 362 aaKnown RBP8.7□□□□□ -1.02
PABPC1-202ENST00000517403 SNRPD1P62314 119 aaKnown RBP8.7□□□□□ -1.02
PABPC1-202ENST00000517403 SLC25A11Q02978 314 aaKnown RBP8.7□□□□□ -1.02
PABPC1-202ENST00000517403 MMRN1Q13201 1228 aa8.7□□□□□ -1.02
PABPC1-202ENST00000517403 UGP2Q16851 508 aa8.7□□□□□ -1.02
PABPC1-202ENST00000517403 CCDC183Q5T5S1 534 aa8.7□□□□□ -1.02
PABPC1-202ENST00000517403 ZCCHC8Q6NZY4 707 aaKnown RBP8.7□□□□□ -1.02
PABPC1-202ENST00000517403 TSPAN33Q86UF1 283 aa8.7□□□□□ -1.02
PABPC1-202ENST00000517403 MSANTD4Q8NCY6 345 aa8.7□□□□□ -1.02
PABPC1-202ENST00000517403 PATE1Q8WXA2 126 aa8.7□□□□□ -1.02
PABPC1-202ENST00000517403 ASB12Q8WXK4 309 aa8.7□□□□□ -1.02
PABPC1-202ENST00000517403 PMEPA1Q969W9 287 aa8.7□□□□□ -1.02
PABPC1-202ENST00000517403 CCDC74AQ96AQ1 378 aa8.7□□□□□ -1.02
PABPC1-202ENST00000517403 SKA1Q96BD8 255 aa8.7□□□□□ -1.02
PABPC1-202ENST00000517403 IFT43Q96FT9 208 aa8.7□□□□□ -1.02
PABPC1-202ENST00000517403 FEM1CQ96JP0 617 aa8.7□□□□□ -1.02
PABPC1-202ENST00000517403 FCRL3Q96P31 734 aaPredicted RBP8.7□□□□□ -1.02
PABPC1-202ENST00000517403 PPP1R9BQ96SB3 815 aa8.7□□□□□ -1.02
PABPC1-202ENST00000517403 BRD8Q9H0E9 1235 aa8.7□□□□□ -1.02
PABPC1-202ENST00000517403 ANO10Q9NW15 660 aa8.7□□□□□ -1.02
PABPC1-202ENST00000517403 SIRPGQ9P1W8 387 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms