RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 ITPKAP23677 461 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 ITGB7P26010 798 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 MAOBP27338 520 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 HOXD12P35452 270 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 MPLP40238 635 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 GARSP41250 739 aaKnown RBP8.41□□□□□ -1.06
CCL28-204ENST00000514421 KCNJ1P48048 391 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 CCR5P51681 352 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 EIF3BP55884 814 aaKnown RBP8.41□□□□□ -1.06
CCL28-204ENST00000514421 SLC10A7Q0GE19 358 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 GALNT2Q10471 571 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 HNRNPDQ14103 355 aaKnown RBP8.41□□□□□ -1.06
CCL28-204ENST00000514421 LBRQ14739 615 aaKnown RBP8.41□□□□□ -1.06
CCL28-204ENST00000514421 GRM3Q14832 879 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 SLMAPQ14BN4 828 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 DUOXA1Q1HG43 343 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 ZNF805Q5CZA5 627 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 MARC1Q5VT66 337 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 KIAA0895LQ68EN5 471 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 TBC1D3GQ6DHY5 549 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 TBC1D3CQ6IPX1 549 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 NEK5Q6P3R8 708 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 GDPD4Q6W3E5 623 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 RFX6Q8HWS3 928 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 CCDC50Q8IVM0 306 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 TBC1D3Q8IZP1 549 aaPredicted RBP8.41□□□□□ -1.06
CCL28-204ENST00000514421 ATPAF2Q8N5M1 289 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 PLD5Q8N7P1 536 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 CCDC89Q8N998 374 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 BBOF1Q8ND07 529 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 GRIN3AQ8TCU5 1115 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 ARRDC3Q96B67 414 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 BIRC7Q96CA5 298 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 SNF8Q96H20 258 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 CINPQ9BW66 212 aaPredicted RBP8.41□□□□□ -1.06
CCL28-204ENST00000514421 PHACTR1Q9C0D0 580 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 SUV39H2Q9H5I1 410 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 ZDHHC6Q9H6R6 413 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 TMEM74BQ9NUR3 256 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 LHX3Q9UBR4 397 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 SUSD2Q9UGT4 822 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 ADAM21Q9UKJ8 722 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 MEI4A8MW99 385 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 PRR5-ARHGAP8B1AHC4 643 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 C10orf142B7Z368 130 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 APOC4-APOC2K7ER74 178 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 PLK4O00444 970 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 NDC80O14777 642 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 APOL1O14791 398 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 INSIG1O15503 277 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 PLRG1O43660 514 aaKnown RBP8.4□□□□□ -1.06
CCL28-204ENST00000514421 CST8O60676 142 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 FSBPO95073 299 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 APOC2P02655 101 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 UGT2B4P06133 528 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 KRT10P13645 584 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 CES1P23141 567 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 GKP32189 559 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 NUDT1P36639 197 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 MAPK8P45983 427 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 NR2C2P49116 596 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 SCNN1BP51168 640 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 NEK3P51956 506 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 METAP1P53582 386 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 ADPRHP54922 357 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 ARHGAP8P85298 464 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 GBE1Q04446 702 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 SLC10A2Q12908 348 aaPredicted RBP8.4□□□□□ -1.06
CCL28-204ENST00000514421 ZNF235Q14590 738 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 PDK1Q15118 436 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 CCDC6Q16204 474 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 POM121L1PQ3SYA9 428 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 PIP5KL1Q5T9C9 394 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 AGBL4Q5VU57 503 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 PEAR1Q5VY43 1037 aaPredicted RBP8.4□□□□□ -1.06
CCL28-204ENST00000514421 TIGD7Q6NT04 549 aaPredicted RBP8.4□□□□□ -1.06
CCL28-204ENST00000514421 FBXL19Q6PCT2 694 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 SLC23A3Q6PIS1 610 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 NCEH1Q6PIU2 408 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 TTC7BQ86TV6 843 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 PRPF39Q86UA1 669 aaKnown RBP8.4□□□□□ -1.06
CCL28-204ENST00000514421 KIAA2013Q8IYS2 634 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 TEX26Q8N6G2 289 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 CCNYQ8ND76 341 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 OR6K2Q8NGY2 324 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 C1orf216Q8TAB5 229 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 ATG4AQ8WYN0 398 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 FATE1Q969F0 183 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 RAB7BQ96AH8 199 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 VOPP1Q96AW1 172 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 FEM1CQ96JP0 617 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 ZNF641Q96N77 438 aaPredicted RBP8.4□□□□□ -1.06
CCL28-204ENST00000514421 KLHL32Q96NJ5 620 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 TUBGCP5Q96RT8 1024 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 HEMGNQ9BXL5 484 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 BRD8Q9H0E9 1235 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 MIR1-1HGQ9H1L0 117 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 DPH5Q9H2P9 285 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 PREBQ9HCU5 417 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 PARD6AQ9NPB6 346 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms