RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 SLC41A1Q8IVJ1 513 aa11.4□□□□□ -0.58
HTT-213ENST00000513806 PDCD7Q8N8D1 485 aaKnown RBP11.4□□□□□ -0.58
HTT-213ENST00000513806 PPP1R16AQ96I34 528 aa11.4□□□□□ -0.58
HTT-213ENST00000513806 LRIG1Q96JA1 1093 aa11.4□□□□□ -0.58
HTT-213ENST00000513806 ZNF641Q96N77 438 aaPredicted RBP11.4□□□□□ -0.58
HTT-213ENST00000513806 TRIB3Q96RU7 358 aa11.4□□□□□ -0.58
HTT-213ENST00000513806 MYOCQ99972 504 aa11.4□□□□□ -0.58
HTT-213ENST00000513806 HDAC8Q9BY41 377 aa11.4□□□□□ -0.58
HTT-213ENST00000513806 BTBD1Q9H0C5 482 aa11.4□□□□□ -0.58
HTT-213ENST00000513806 RAB6BQ9NRW1 208 aa11.4□□□□□ -0.58
HTT-213ENST00000513806 HOMER3Q9NSC5 361 aa11.4□□□□□ -0.58
HTT-213ENST00000513806 ZFR2Q9UPR6 939 aaKnown RBP11.4□□□□□ -0.58
HTT-213ENST00000513806 FADS3Q9Y5Q0 445 aa11.4□□□□□ -0.58
HTT-213ENST00000513806 MYO15AQ9UKN7 3530 aa11.4□□□□□ -0.58
HTT-213ENST00000513806 TMEM131Q92545 1883 aa11.4□□□□□ -0.59
HTT-213ENST00000513806 MUC6Q6W4X9 2439 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 CACNA1HO95180 2353 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 TBC1D3DA0A087WVF3 549 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 TBC1D3IA0A087WXS9 549 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 TBC1D3EA0A087X179 549 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 TBC1D3KA0A087X1G2 549 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 TBC1D3FA6NER0 549 aaPredicted RBP11.39□□□□□ -0.59
HTT-213ENST00000513806 NPIPB15A6NHN6 443 aaPredicted RBP11.39□□□□□ -0.59
HTT-213ENST00000513806 TBC1D3LB9A6J9 549 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 MAP3K13O43283 966 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 RAD51CO43502 376 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 PLRG1O43660 514 aaKnown RBP11.39□□□□□ -0.59
HTT-213ENST00000513806 MMP20O60882 483 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 RNGTTO60942 597 aaKnown RBP11.39□□□□□ -0.59
HTT-213ENST00000513806 SOCS5O75159 536 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 NDUFS2O75306 463 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 ZNF217O75362 1048 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 FSBPO95073 299 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 PCDH8O95206 1070 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 ECEL1O95672 775 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 IGLV3-19P01714 112 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 ATXN1LP0C7T5 689 aaKnown RBP11.39□□□□□ -0.59
HTT-213ENST00000513806 TBC1D3HP0C7X1 549 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 C7P10643 843 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 LHCGRP22888 699 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 HNF1BP35680 557 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 MAPK8P45983 427 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 FNTAP49354 379 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 EPHB1P54762 984 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 GEMP55040 296 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 BASP1P80723 227 aaKnown RBP11.39□□□□□ -0.59
HTT-213ENST00000513806 CDK18Q07002 472 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 RALGDSQ12967 914 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 PRPSAP1Q14558 356 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 GRM3Q14832 879 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 PPP1R7Q15435 360 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 WHAMMP3Q1A5X7 153 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 ZNF528Q3MIS6 628 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 RALGPS1Q5JS13 557 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 SIRPB2Q5JXA9 342 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 DNTTIP2Q5QJE6 756 aaKnown RBP11.39□□□□□ -0.59
HTT-213ENST00000513806 ANKRD22Q5VYY1 191 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 KCTD11Q693B1 232 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 TBC1D3GQ6DHY5 549 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 TBC1D3CQ6IPX1 549 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 USP30Q70CQ3 517 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 CEP68Q76N32 757 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 TBC1D3Q8IZP1 549 aaPredicted RBP11.39□□□□□ -0.59
HTT-213ENST00000513806 ZBTB44Q8NCP5 570 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 GAB3Q8WWW8 586 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 SNX19Q92543 992 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 FAM131CQ96AQ9 280 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 RMDN1Q96DB5 314 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 IFT43Q96FT9 208 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 SPACA7Q96KW9 195 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 PHOX2BQ99453 314 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 CARD6Q9BX69 1037 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 TRIM31Q9BZY9 425 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 EBF2Q9HAK2 575 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 FZD3Q9NPG1 666 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 PAK5Q9P286 719 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 DKK3Q9UBP4 350 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 RNF14Q9UBS8 474 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 B4GALT6Q9UBX8 382 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 PCYOX1Q9UHG3 505 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 PHTF1Q9UMS5 762 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 SCML1Q9UN30 329 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 CA5BQ9Y2D0 317 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 SPO11Q9Y5K1 396 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 TDRD6O60522 2096 aaKnown RBP11.39□□□□□ -0.59
HTT-213ENST00000513806 PLXNB3Q9ULL4 1909 aa11.39□□□□□ -0.59
HTT-213ENST00000513806 CCDC163A0A0D9SF12 145 aa11.38□□□□□ -0.59
HTT-213ENST00000513806 A0A1W2PQU0 124 aa11.38□□□□□ -0.59
HTT-213ENST00000513806 IGLON5A6NGN9 336 aa11.38□□□□□ -0.59
HTT-213ENST00000513806 CCDC188H7C350 402 aa11.38□□□□□ -0.59
HTT-213ENST00000513806 NEMP1O14524 444 aa11.38□□□□□ -0.59
HTT-213ENST00000513806 RIOK3O14730 519 aaKnown RBP11.38□□□□□ -0.59
HTT-213ENST00000513806 AURKAO14965 403 aa11.38□□□□□ -0.59
HTT-213ENST00000513806 AREL1O15033 823 aa11.38□□□□□ -0.59
HTT-213ENST00000513806 BUD23O43709 281 aaKnown RBP11.38□□□□□ -0.59
HTT-213ENST00000513806 LILRB5O75023 590 aa11.38□□□□□ -0.59
HTT-213ENST00000513806 TPH1P17752 444 aa11.38□□□□□ -0.59
HTT-213ENST00000513806 CES1P23141 567 aa11.38□□□□□ -0.59
HTT-213ENST00000513806 ADRA1AP35348 466 aa11.38□□□□□ -0.59
HTT-213ENST00000513806 ACTN2P35609 894 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms