RNA–Protein interactions for RNA: ENST00000512487.1

LINC00290-201, long intergenic non-protein coding RNA 290, humanhuman

TSL 1 (best) BASIC

Gene LINC00290, Length 593 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00290-201ENST00000512487 CXorf40AQ8TE69 158 aa11.96□□□□□ -0.49
LINC00290-201ENST00000512487 PDCD6IPQ8WUM4 868 aaKnown RBP11.96□□□□□ -0.49
LINC00290-201ENST00000512487 PTCD2Q8WV60 388 aaKnown RBP11.96□□□□□ -0.49
LINC00290-201ENST00000512487 PEX13Q92968 403 aa11.96□□□□□ -0.49
LINC00290-201ENST00000512487 EXOC2Q96KP1 924 aa11.96□□□□□ -0.49
LINC00290-201ENST00000512487 HHIPQ96QV1 700 aa11.96□□□□□ -0.49
LINC00290-201ENST00000512487 LYSMD1Q96S90 227 aa11.96□□□□□ -0.49
LINC00290-201ENST00000512487 RBM15Q96T37 977 aaKnown RBP eCLIP11.96□□□□□ -0.49
LINC00290-201ENST00000512487 KRT12Q99456 494 aa11.96□□□□□ -0.49
LINC00290-201ENST00000512487 NAT9Q9BTE0 207 aa11.96□□□□□ -0.49
LINC00290-201ENST00000512487 DDX47Q9H0S4 455 aaKnown RBP11.96□□□□□ -0.49
LINC00290-201ENST00000512487 RAB23Q9ULC3 237 aa11.96□□□□□ -0.49
LINC00290-201ENST00000512487 DMTF1Q9Y222 760 aa11.96□□□□□ -0.49
LINC00290-201ENST00000512487 CKAP5Q14008 2032 aa11.95□□□□□ -0.5
LINC00290-201ENST00000512487 PLRG1O43660 514 aaKnown RBP11.95□□□□□ -0.5
LINC00290-201ENST00000512487 FZD6O60353 706 aa11.95□□□□□ -0.5
LINC00290-201ENST00000512487 MAGEC1O60732 1142 aa11.95□□□□□ -0.5
LINC00290-201ENST00000512487 APRTP07741 180 aa11.95□□□□□ -0.5
LINC00290-201ENST00000512487 COL9A1P20849 921 aa11.95□□□□□ -0.5
LINC00290-201ENST00000512487 PSMB4P28070 264 aa11.95□□□□□ -0.5
LINC00290-201ENST00000512487 CD68P34810 354 aaPredicted RBP11.95□□□□□ -0.5
LINC00290-201ENST00000512487 RPL22P35268 128 aaKnown RBP11.95□□□□□ -0.5
LINC00290-201ENST00000512487 HOXD12P35452 270 aa11.95□□□□□ -0.5
LINC00290-201ENST00000512487 P2RY2P41231 377 aa11.95□□□□□ -0.5
LINC00290-201ENST00000512487 KCNJ1P48048 391 aa11.95□□□□□ -0.5
LINC00290-201ENST00000512487 NPY2RP49146 381 aa11.95□□□□□ -0.5
LINC00290-201ENST00000512487 NIPAL4Q0D2K0 466 aa11.95□□□□□ -0.5
LINC00290-201ENST00000512487 ILF2Q12905 390 aaKnown RBP11.95□□□□□ -0.5
LINC00290-201ENST00000512487 SGCGQ13326 291 aa11.95□□□□□ -0.5
LINC00290-201ENST00000512487 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.95□□□□□ -0.5
LINC00290-201ENST00000512487 LPCAT2Q7L5N7 544 aa11.95□□□□□ -0.5
LINC00290-201ENST00000512487 NLRP8Q86W28 1048 aa11.95□□□□□ -0.5
LINC00290-201ENST00000512487 JAMLQ86YT9 394 aa11.95□□□□□ -0.5
LINC00290-201ENST00000512487 NRSN1Q8IZ57 195 aa11.95□□□□□ -0.5
LINC00290-201ENST00000512487 DNAAF3Q8N9W5 541 aa11.95□□□□□ -0.5
LINC00290-201ENST00000512487 NETO2Q8NC67 525 aa11.95□□□□□ -0.5
LINC00290-201ENST00000512487 MDGA1Q8NFP4 955 aa11.95□□□□□ -0.5
LINC00290-201ENST00000512487 OR14C36Q8NHC7 312 aa11.95□□□□□ -0.5
LINC00290-201ENST00000512487 GAB3Q8WWW8 586 aa11.95□□□□□ -0.5
LINC00290-201ENST00000512487 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.95□□□□□ -0.5
LINC00290-201ENST00000512487 NELL1Q92832 810 aa11.95□□□□□ -0.5
LINC00290-201ENST00000512487 SNF8Q96H20 258 aa11.95□□□□□ -0.5
LINC00290-201ENST00000512487 LOXL4Q96JB6 756 aa11.95□□□□□ -0.5
LINC00290-201ENST00000512487 MCCC1Q96RQ3 725 aaPredicted RBP11.95□□□□□ -0.5
LINC00290-201ENST00000512487 FAM118BQ9BPY3 351 aa11.95□□□□□ -0.5
LINC00290-201ENST00000512487 TBL1YQ9BQ87 522 aa11.95□□□□□ -0.5
LINC00290-201ENST00000512487 ERP44Q9BS26 406 aa11.95□□□□□ -0.5
LINC00290-201ENST00000512487 ETNK1Q9HBU6 452 aa11.95□□□□□ -0.5
LINC00290-201ENST00000512487 BFARQ9NZS9 450 aa11.95□□□□□ -0.5
LINC00290-201ENST00000512487 SHOC2Q9UQ13 582 aa11.95□□□□□ -0.5
LINC00290-201ENST00000512487 PCDHGC4Q9Y5F7 938 aa11.95□□□□□ -0.5
LINC00290-201ENST00000512487 TBC1D3DA0A087WVF3 549 aa11.94□□□□□ -0.5
LINC00290-201ENST00000512487 TBC1D3IA0A087WXS9 549 aa11.94□□□□□ -0.5
LINC00290-201ENST00000512487 TBC1D3EA0A087X179 549 aa11.94□□□□□ -0.5
LINC00290-201ENST00000512487 TBC1D3KA0A087X1G2 549 aa11.94□□□□□ -0.5
LINC00290-201ENST00000512487 A0A0J9YYE9 177 aa11.94□□□□□ -0.5
LINC00290-201ENST00000512487 A0A1W2PP55 124 aa11.94□□□□□ -0.5
LINC00290-201ENST00000512487 TBC1D3FA6NER0 549 aaPredicted RBP11.94□□□□□ -0.5
LINC00290-201ENST00000512487 EFCAB8A8MWE9 144 aa11.94□□□□□ -0.5
LINC00290-201ENST00000512487 PRR5-ARHGAP8B1AHC4 643 aa11.94□□□□□ -0.5
LINC00290-201ENST00000512487 TBC1D3LB9A6J9 549 aa11.94□□□□□ -0.5
LINC00290-201ENST00000512487 RIOK3O14730 519 aaKnown RBP11.94□□□□□ -0.5
LINC00290-201ENST00000512487 MUSKO15146 869 aa11.94□□□□□ -0.5
LINC00290-201ENST00000512487 PMPCBO75439 489 aa11.94□□□□□ -0.5
LINC00290-201ENST00000512487 RPP40O75818 363 aaKnown RBP11.94□□□□□ -0.5
LINC00290-201ENST00000512487 SEMA4FO95754 770 aa11.94□□□□□ -0.5
LINC00290-201ENST00000512487 TRBC1P01850 177 aa11.94□□□□□ -0.5
LINC00290-201ENST00000512487 CTSLP07711 333 aa11.94□□□□□ -0.5
LINC00290-201ENST00000512487 TBC1D3HP0C7X1 549 aa11.94□□□□□ -0.5
LINC00290-201ENST00000512487 TIMP2P16035 220 aa11.94□□□□□ -0.5
LINC00290-201ENST00000512487 VIPR1P32241 457 aa11.94□□□□□ -0.5
LINC00290-201ENST00000512487 HADHAP40939 763 aa11.94□□□□□ -0.5
LINC00290-201ENST00000512487 RGRP47804 291 aa11.94□□□□□ -0.5
LINC00290-201ENST00000512487 CNTN1Q12860 1018 aa11.94□□□□□ -0.5
LINC00290-201ENST00000512487 SLC1A5Q15758 541 aa11.94□□□□□ -0.5
LINC00290-201ENST00000512487 TMEM52BQ4KMG9 183 aa11.94□□□□□ -0.5
LINC00290-201ENST00000512487 SETMARQ53H47 684 aaPredicted RBP11.94□□□□□ -0.5
LINC00290-201ENST00000512487 DNAJC21Q5F1R6 531 aaKnown RBP11.94□□□□□ -0.5
LINC00290-201ENST00000512487 TBC1D3GQ6DHY5 549 aa11.94□□□□□ -0.5
LINC00290-201ENST00000512487 TBC1D3CQ6IPX1 549 aa11.94□□□□□ -0.5
LINC00290-201ENST00000512487 PKN3Q6P5Z2 889 aa11.94□□□□□ -0.5
LINC00290-201ENST00000512487 KDELC1Q6UW63 502 aa11.94□□□□□ -0.5
LINC00290-201ENST00000512487 RANBP10Q6VN20 620 aa11.94□□□□□ -0.5
LINC00290-201ENST00000512487 DPPA4Q7L190 304 aa11.94□□□□□ -0.5
LINC00290-201ENST00000512487 TRIM69Q86WT6 500 aa11.94□□□□□ -0.5
LINC00290-201ENST00000512487 TBC1D3Q8IZP1 549 aaPredicted RBP11.94□□□□□ -0.5
LINC00290-201ENST00000512487 EIF1ADQ8N9N8 165 aaKnown RBP11.94□□□□□ -0.5
LINC00290-201ENST00000512487 DENND6BQ8NEG7 585 aa11.94□□□□□ -0.5
LINC00290-201ENST00000512487 IPMKQ8NFU5 416 aa11.94□□□□□ -0.5
LINC00290-201ENST00000512487 DTX3LQ8TDB6 740 aa11.94□□□□□ -0.5
LINC00290-201ENST00000512487 BRSK1Q8TDC3 778 aa11.94□□□□□ -0.5
LINC00290-201ENST00000512487 LRRC39Q96DD0 335 aa11.94□□□□□ -0.5
LINC00290-201ENST00000512487 LRFN3Q9BTN0 628 aa11.94□□□□□ -0.5
LINC00290-201ENST00000512487 PHACTR1Q9C0D0 580 aa11.94□□□□□ -0.5
LINC00290-201ENST00000512487 IL22Q9GZX6 179 aa11.94□□□□□ -0.5
LINC00290-201ENST00000512487 DUSP15Q9H1R2 295 aaPredicted RBP11.94□□□□□ -0.5
LINC00290-201ENST00000512487 NEUROG2Q9H2A3 272 aa11.94□□□□□ -0.5
LINC00290-201ENST00000512487 FAM114A2Q9NRY5 505 aa11.94□□□□□ -0.5
LINC00290-201ENST00000512487 WSB2Q9NYS7 404 aaPredicted RBP11.94□□□□□ -0.5
LINC00290-201ENST00000512487 WHRNQ9P202 907 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms