RNA–Protein interactions for RNA: ENST00000511891.5

COPS4-211, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-211ENST00000511891 APOLD1Q96LR9 279 aa9.98□□□□□ -0.81
COPS4-211ENST00000511891 CSPG4P5Q96PW8 444 aa9.98□□□□□ -0.81
COPS4-211ENST00000511891 TUBGCP5Q96RT8 1024 aa9.98□□□□□ -0.81
COPS4-211ENST00000511891 PCDH18Q9HCL0 1135 aa9.98□□□□□ -0.81
COPS4-211ENST00000511891 NLGN3Q9NZ94 848 aa9.98□□□□□ -0.81
COPS4-211ENST00000511891 NEMP2A6NFY4 417 aa9.97□□□□□ -0.81
COPS4-211ENST00000511891 A8MX80 341 aa9.97□□□□□ -0.81
COPS4-211ENST00000511891 H3BM21 787 aa9.97□□□□□ -0.81
COPS4-211ENST00000511891 AQP9O43315 295 aa9.97□□□□□ -0.81
COPS4-211ENST00000511891 GCATO75600 419 aa9.97□□□□□ -0.81
COPS4-211ENST00000511891 PEX11BO96011 259 aa9.97□□□□□ -0.81
COPS4-211ENST00000511891 CELA2BP08218 269 aaPredicted RBP9.97□□□□□ -0.81
COPS4-211ENST00000511891 CD48P09326 243 aa9.97□□□□□ -0.81
COPS4-211ENST00000511891 ALPPL2P10696 532 aa9.97□□□□□ -0.81
COPS4-211ENST00000511891 CDK4P11802 303 aa9.97□□□□□ -0.81
COPS4-211ENST00000511891 CKMT1AP12532 417 aa9.97□□□□□ -0.81
COPS4-211ENST00000511891 SERPINA4P29622 427 aa9.97□□□□□ -0.81
COPS4-211ENST00000511891 EIF4A3P38919 411 aaKnown RBP9.97□□□□□ -0.81
COPS4-211ENST00000511891 MMP12P39900 470 aa9.97□□□□□ -0.81
COPS4-211ENST00000511891 CSNK1DP48730 415 aa9.97□□□□□ -0.81
COPS4-211ENST00000511891 LIG3P49916 1009 aa9.97□□□□□ -0.81
COPS4-211ENST00000511891 ZNF135P52742 658 aaPredicted RBP9.97□□□□□ -0.81
COPS4-211ENST00000511891 THOP1P52888 689 aa9.97□□□□□ -0.81
COPS4-211ENST00000511891 RALGDSQ12967 914 aa9.97□□□□□ -0.81
COPS4-211ENST00000511891 ILKQ13418 452 aa9.97□□□□□ -0.81
COPS4-211ENST00000511891 LBRQ14739 615 aaKnown RBP9.97□□□□□ -0.81
COPS4-211ENST00000511891 GRM3Q14832 879 aa9.97□□□□□ -0.81
COPS4-211ENST00000511891 LRRC14Q15048 493 aa9.97□□□□□ -0.81
COPS4-211ENST00000511891 DEFB133Q30KQ1 61 aa9.97□□□□□ -0.81
COPS4-211ENST00000511891 ATP13A4Q4VNC1 1196 aa9.97□□□□□ -0.81
COPS4-211ENST00000511891 PRRT3Q5FWE3 981 aa9.97□□□□□ -0.81
COPS4-211ENST00000511891 TMCO4Q5TGY1 634 aa9.97□□□□□ -0.81
COPS4-211ENST00000511891 BRAT1Q6PJG6 821 aa9.97□□□□□ -0.81
COPS4-211ENST00000511891 TMCO3Q6UWJ1 677 aa9.97□□□□□ -0.81
COPS4-211ENST00000511891 PHACTR4Q8IZ21 702 aa9.97□□□□□ -0.81
COPS4-211ENST00000511891 PGBD5Q8N414 524 aa9.97□□□□□ -0.81
COPS4-211ENST00000511891 LZTR1Q8N653 840 aa9.97□□□□□ -0.81
COPS4-211ENST00000511891 PAF1Q8N7H5 531 aa9.97□□□□□ -0.81
COPS4-211ENST00000511891 NIPA2Q8N8Q9 360 aa9.97□□□□□ -0.81
COPS4-211ENST00000511891 HCAR2Q8TDS4 363 aa9.97□□□□□ -0.81
COPS4-211ENST00000511891 ZNF641Q96N77 438 aaPredicted RBP9.97□□□□□ -0.81
COPS4-211ENST00000511891 C1QTNF7Q9BXJ2 289 aa9.97□□□□□ -0.81
COPS4-211ENST00000511891 PACSIN1Q9BY11 444 aa9.97□□□□□ -0.81
COPS4-211ENST00000511891 ATP13A3Q9H7F0 1226 aa9.97□□□□□ -0.81
COPS4-211ENST00000511891 SEPT3Q9UH03 358 aa9.97□□□□□ -0.81
COPS4-211ENST00000511891 APOBEC3BQ9UH17 382 aaKnown RBP9.97□□□□□ -0.81
COPS4-211ENST00000511891 IP6K2Q9UHH9 426 aa9.97□□□□□ -0.81
COPS4-211ENST00000511891 NENFQ9UMX5 172 aa9.97□□□□□ -0.81
COPS4-211ENST00000511891 ATP8A1Q9Y2Q0 1164 aa9.97□□□□□ -0.81
COPS4-211ENST00000511891 KNTC1P50748 2209 aa9.97□□□□□ -0.81
COPS4-211ENST00000511891 LRRK1Q38SD2 2015 aa9.96□□□□□ -0.81
COPS4-211ENST00000511891 MYO1FO00160 1098 aa9.96□□□□□ -0.82
COPS4-211ENST00000511891 TRAFD1O14545 582 aaPredicted RBP9.96□□□□□ -0.82
COPS4-211ENST00000511891 LZTS3O60299 673 aaPredicted RBP9.96□□□□□ -0.82
COPS4-211ENST00000511891 MT-CO3P00414 261 aa9.96□□□□□ -0.82
COPS4-211ENST00000511891 PCCBP05166 539 aa9.96□□□□□ -0.82
COPS4-211ENST00000511891 IL4RP24394 825 aa9.96□□□□□ -0.82
COPS4-211ENST00000511891 SUOXP51687 545 aa9.96□□□□□ -0.82
COPS4-211ENST00000511891 ADKP55263 362 aaKnown RBP9.96□□□□□ -0.82
COPS4-211ENST00000511891 CDH6P55285 790 aa9.96□□□□□ -0.82
COPS4-211ENST00000511891 MAXP61244 160 aa9.96□□□□□ -0.82
COPS4-211ENST00000511891 BCL2L1Q07817 233 aa9.96□□□□□ -0.82
COPS4-211ENST00000511891 PTK2BQ14289 1009 aa9.96□□□□□ -0.82
COPS4-211ENST00000511891 KRT81Q14533 505 aa9.96□□□□□ -0.82
COPS4-211ENST00000511891 ZNF235Q14590 738 aa9.96□□□□□ -0.82
COPS4-211ENST00000511891 INPP5AQ14642 412 aa9.96□□□□□ -0.82
COPS4-211ENST00000511891 RFTN1Q14699 578 aaPredicted RBP9.96□□□□□ -0.82
COPS4-211ENST00000511891 CDKN3Q16667 212 aa9.96□□□□□ -0.82
COPS4-211ENST00000511891 FAXCQ5TGI0 409 aa9.96□□□□□ -0.82
COPS4-211ENST00000511891 KCTD16Q68DU8 428 aa9.96□□□□□ -0.82
COPS4-211ENST00000511891 ERAP2Q6P179 960 aa9.96□□□□□ -0.82
COPS4-211ENST00000511891 MACC1Q6ZN28 852 aa9.96□□□□□ -0.82
COPS4-211ENST00000511891 FAM181AQ8N9Y4 354 aa9.96□□□□□ -0.82
COPS4-211ENST00000511891 PLA2G15Q8NCC3 412 aa9.96□□□□□ -0.82
COPS4-211ENST00000511891 ZNF564Q8TBZ8 553 aaPredicted RBP9.96□□□□□ -0.82
COPS4-211ENST00000511891 HNRNPLLQ8WVV9 542 aaKnown RBP9.96□□□□□ -0.82
COPS4-211ENST00000511891 TEKT4Q8WW24 435 aa9.96□□□□□ -0.82
COPS4-211ENST00000511891 RFFLQ8WZ73 363 aa9.96□□□□□ -0.82
COPS4-211ENST00000511891 TSACCQ96A04 125 aaPredicted RBP9.96□□□□□ -0.82
COPS4-211ENST00000511891 ECHDC3Q96DC8 303 aa9.96□□□□□ -0.82
COPS4-211ENST00000511891 IQCDQ96DY2 449 aa9.96□□□□□ -0.82
COPS4-211ENST00000511891 PSKH2Q96QS6 385 aa9.96□□□□□ -0.82
COPS4-211ENST00000511891 LRRC61Q9BV99 259 aa9.96□□□□□ -0.82
COPS4-211ENST00000511891 CLPBQ9H078 707 aa9.96□□□□□ -0.82
COPS4-211ENST00000511891 CTTNBP2NLQ9P2B4 639 aa9.96□□□□□ -0.82
COPS4-211ENST00000511891 SPASTQ9UBP0 616 aa9.96□□□□□ -0.82
COPS4-211ENST00000511891 DKK4Q9UBT3 224 aa9.96□□□□□ -0.82
COPS4-211ENST00000511891 CLCA2Q9UQC9 943 aa9.96□□□□□ -0.82
COPS4-211ENST00000511891 GPSM3Q9Y4H4 160 aa9.96□□□□□ -0.82
COPS4-211ENST00000511891 OR1A2Q9Y585 309 aa9.96□□□□□ -0.82
COPS4-211ENST00000511891 PCDHGC4Q9Y5F7 938 aa9.96□□□□□ -0.82
COPS4-211ENST00000511891 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.96□□□□□ -0.82
COPS4-211ENST00000511891 CSNK1G3Q9Y6M4 447 aa9.96□□□□□ -0.82
COPS4-211ENST00000511891 ZZEF1O43149 2961 aa9.96□□□□□ -0.82
COPS4-211ENST00000511891 APC2O95996 2303 aa9.95□□□□□ -0.82
COPS4-211ENST00000511891 DMXL2Q8TDJ6 3036 aa9.95□□□□□ -0.82
COPS4-211ENST00000511891 CFAP47Q6ZTR5 3102 aa9.95□□□□□ -0.82
COPS4-211ENST00000511891 CPED1A4D0V7 1026 aa9.95□□□□□ -0.82
COPS4-211ENST00000511891 CASC3O15234 703 aaKnown RBP9.95□□□□□ -0.82
COPS4-211ENST00000511891 MFSD11O43934 449 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms