RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 C1orf61Q13536 156 aa14.92□□□□□ -0.02
UBE2D3-228ENST00000508974 TRIM14Q14142 442 aa14.92□□□□□ -0.02
UBE2D3-228ENST00000508974 RFTN1Q14699 578 aaPredicted RBP14.92□□□□□ -0.02
UBE2D3-228ENST00000508974 SLC18A3Q16572 532 aa14.92□□□□□ -0.02
UBE2D3-228ENST00000508974 HADHQ16836 314 aaKnown RBP14.92□□□□□ -0.02
UBE2D3-228ENST00000508974 DEFB133Q30KQ1 61 aa14.92□□□□□ -0.02
UBE2D3-228ENST00000508974 ZFYVE27Q5T4F4 411 aa14.92□□□□□ -0.02
UBE2D3-228ENST00000508974 HES3Q5TGS1 186 aa14.92□□□□□ -0.02
UBE2D3-228ENST00000508974 BRAT1Q6PJG6 821 aa14.92□□□□□ -0.02
UBE2D3-228ENST00000508974 VSTM4Q8IW00 320 aa14.92□□□□□ -0.02
UBE2D3-228ENST00000508974 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.92□□□□□ -0.02
UBE2D3-228ENST00000508974 ASB12Q8WXK4 309 aa14.92□□□□□ -0.02
UBE2D3-228ENST00000508974 DNAJC7Q99615 494 aa14.92□□□□□ -0.02
UBE2D3-228ENST00000508974 CHP1Q99653 195 aa14.92□□□□□ -0.02
UBE2D3-228ENST00000508974 C1QTNF7Q9BXJ2 289 aa14.92□□□□□ -0.02
UBE2D3-228ENST00000508974 CCDC86Q9H6F5 360 aaKnown RBP14.92□□□□□ -0.02
UBE2D3-228ENST00000508974 ABHD10Q9NUJ1 306 aa14.92□□□□□ -0.02
UBE2D3-228ENST00000508974 SPTLC3Q9NUV7 552 aa14.92□□□□□ -0.02
UBE2D3-228ENST00000508974 ZNHIT6Q9NWK9 470 aaKnown RBP14.92□□□□□ -0.02
UBE2D3-228ENST00000508974 PNMA8BQ9ULN7 279 aaPredicted RBP14.92□□□□□ -0.02
UBE2D3-228ENST00000508974 PCDHGA1Q9Y5H4 931 aa14.92□□□□□ -0.02
UBE2D3-228ENST00000508974 CFAP47Q6ZTR5 3102 aa14.92□□□□□ -0.02
UBE2D3-228ENST00000508974 TRABD2BA6NFA1 517 aa14.91□□□□□ -0.02
UBE2D3-228ENST00000508974 TAF4O00268 1085 aa14.91□□□□□ -0.02
UBE2D3-228ENST00000508974 MFSD11O43934 449 aa14.91□□□□□ -0.02
UBE2D3-228ENST00000508974 MAFKO60675 156 aa14.91□□□□□ -0.02
UBE2D3-228ENST00000508974 PROSCO94903 275 aa14.91□□□□□ -0.02
UBE2D3-228ENST00000508974 PCCBP05166 539 aa14.91□□□□□ -0.02
UBE2D3-228ENST00000508974 TPM1P09493 284 aa14.91□□□□□ -0.02
UBE2D3-228ENST00000508974 H2AFZP0C0S5 128 aa14.91□□□□□ -0.02
UBE2D3-228ENST00000508974 NME1P15531 152 aaKnown RBP14.91□□□□□ -0.02
UBE2D3-228ENST00000508974 SERPINB6P35237 376 aa14.91□□□□□ -0.02
UBE2D3-228ENST00000508974 HNF1BP35680 557 aa14.91□□□□□ -0.02
UBE2D3-228ENST00000508974 CSNK1DP48730 415 aa14.91□□□□□ -0.02
UBE2D3-228ENST00000508974 RENBPP51606 427 aa14.91□□□□□ -0.02
UBE2D3-228ENST00000508974 TAS2R40P59535 323 aa14.91□□□□□ -0.02
UBE2D3-228ENST00000508974 ZNF211Q13398 564 aaPredicted RBP14.91□□□□□ -0.02
UBE2D3-228ENST00000508974 LRRC14Q15048 493 aa14.91□□□□□ -0.02
UBE2D3-228ENST00000508974 TSR1Q2NL82 804 aaKnown RBP14.91□□□□□ -0.02
UBE2D3-228ENST00000508974 WSCD2Q2TBF2 565 aa14.91□□□□□ -0.02
UBE2D3-228ENST00000508974 NYAP1Q6ZVC0 841 aa14.91□□□□□ -0.02
UBE2D3-228ENST00000508974 H2AFVQ71UI9 128 aa14.91□□□□□ -0.02
UBE2D3-228ENST00000508974 PGBD5Q8N414 524 aa14.91□□□□□ -0.02
UBE2D3-228ENST00000508974 LRRN4Q8WUT4 740 aa14.91□□□□□ -0.02
UBE2D3-228ENST00000508974 IFT43Q96FT9 208 aa14.91□□□□□ -0.02
UBE2D3-228ENST00000508974 APOLD1Q96LR9 279 aa14.91□□□□□ -0.02
UBE2D3-228ENST00000508974 ZNF599Q96NL3 588 aa14.91□□□□□ -0.02
UBE2D3-228ENST00000508974 PSKH2Q96QS6 385 aa14.91□□□□□ -0.02
UBE2D3-228ENST00000508974 SCUBE2Q9NQ36 999 aa14.91□□□□□ -0.02
UBE2D3-228ENST00000508974 NLGN3Q9NZ94 848 aa14.91□□□□□ -0.02
UBE2D3-228ENST00000508974 APOBEC3BQ9UH17 382 aaKnown RBP14.91□□□□□ -0.02
UBE2D3-228ENST00000508974 OR1A2Q9Y585 309 aa14.91□□□□□ -0.02
UBE2D3-228ENST00000508974 PCDHGC4Q9Y5F7 938 aa14.91□□□□□ -0.02
UBE2D3-228ENST00000508974 NEMP2A6NFY4 417 aa14.9□□□□□ -0.02
UBE2D3-228ENST00000508974 K7ESM1 405 aa14.9□□□□□ -0.02
UBE2D3-228ENST00000508974 AQP9O43315 295 aa14.9□□□□□ -0.02
UBE2D3-228ENST00000508974 MFAP3LO75121 409 aa14.9□□□□□ -0.02
UBE2D3-228ENST00000508974 PEX11BO96011 259 aa14.9□□□□□ -0.02
UBE2D3-228ENST00000508974 C1SP09871 688 aa14.9□□□□□ -0.02
UBE2D3-228ENST00000508974 ELFN1P0C7U0 828 aa14.9□□□□□ -0.02
UBE2D3-228ENST00000508974 IL4RP24394 825 aa14.9□□□□□ -0.02
UBE2D3-228ENST00000508974 ACP1P24666 158 aa14.9□□□□□ -0.02
UBE2D3-228ENST00000508974 SUOXP51687 545 aa14.9□□□□□ -0.02
UBE2D3-228ENST00000508974 AP1S1P61966 158 aa14.9□□□□□ -0.02
UBE2D3-228ENST00000508974 CYP4F3Q08477 520 aa14.9□□□□□ -0.02
UBE2D3-228ENST00000508974 NSUN2Q08J23 767 aaKnown RBP eCLIP14.9□□□□□ -0.02
UBE2D3-228ENST00000508974 RALGDSQ12967 914 aa14.9□□□□□ -0.02
UBE2D3-228ENST00000508974 TARDBPQ13148 414 aaKnown RBP eCLIP14.9□□□□□ -0.02
UBE2D3-228ENST00000508974 DPYSL3Q14195 570 aa14.9□□□□□ -0.02
UBE2D3-228ENST00000508974 PTK2BQ14289 1009 aa14.9□□□□□ -0.02
UBE2D3-228ENST00000508974 INPP5AQ14642 412 aa14.9□□□□□ -0.02
UBE2D3-228ENST00000508974 MESDQ14696 234 aa14.9□□□□□ -0.02
UBE2D3-228ENST00000508974 PRRT3Q5FWE3 981 aa14.9□□□□□ -0.02
UBE2D3-228ENST00000508974 FAXCQ5TGI0 409 aa14.9□□□□□ -0.02
UBE2D3-228ENST00000508974 DENND2CQ68D51 928 aa14.9□□□□□ -0.02
UBE2D3-228ENST00000508974 TMPRSS12Q86WS5 348 aa14.9□□□□□ -0.02
UBE2D3-228ENST00000508974 PROSER1Q86XN7 944 aa14.9□□□□□ -0.02
UBE2D3-228ENST00000508974 PHACTR4Q8IZ21 702 aa14.9□□□□□ -0.02
UBE2D3-228ENST00000508974 KCTD6Q8NC69 237 aa14.9□□□□□ -0.02
UBE2D3-228ENST00000508974 HCAR2Q8TDS4 363 aa14.9□□□□□ -0.02
UBE2D3-228ENST00000508974 NSMCE1Q8WV22 266 aa14.9□□□□□ -0.02
UBE2D3-228ENST00000508974 UVRAGQ9P2Y5 699 aa14.9□□□□□ -0.02
UBE2D3-228ENST00000508974 TRAFD1O14545 582 aaPredicted RBP14.89□□□□□ -0.03
UBE2D3-228ENST00000508974 CAPNS1P04632 268 aa14.89□□□□□ -0.03
UBE2D3-228ENST00000508974 MMP13P45452 471 aa14.89□□□□□ -0.03
UBE2D3-228ENST00000508974 YPEL5P62699 121 aa14.89□□□□□ -0.03
UBE2D3-228ENST00000508974 INSM1Q01101 510 aaPredicted RBP14.89□□□□□ -0.03
UBE2D3-228ENST00000508974 ITKQ08881 620 aa14.89□□□□□ -0.03
UBE2D3-228ENST00000508974 CAMK2BQ13554 666 aa14.89□□□□□ -0.03
UBE2D3-228ENST00000508974 PTPRRQ15256 657 aa14.89□□□□□ -0.03
UBE2D3-228ENST00000508974 ASTE1Q2TB18 679 aaPredicted RBP14.89□□□□□ -0.03
UBE2D3-228ENST00000508974 MARC1Q5VT66 337 aa14.89□□□□□ -0.03
UBE2D3-228ENST00000508974 NCBP2-AS2Q69YL0 99 aa14.89□□□□□ -0.03
UBE2D3-228ENST00000508974 MACC1Q6ZN28 852 aa14.89□□□□□ -0.03
UBE2D3-228ENST00000508974 RD3Q7Z3Z2 195 aa14.89□□□□□ -0.03
UBE2D3-228ENST00000508974 BBS5Q8N3I7 341 aa14.89□□□□□ -0.03
UBE2D3-228ENST00000508974 PLA2G15Q8NCC3 412 aa14.89□□□□□ -0.03
UBE2D3-228ENST00000508974 PCDH19Q8TAB3 1148 aa14.89□□□□□ -0.03
UBE2D3-228ENST00000508974 TSACCQ96A04 125 aaPredicted RBP14.89□□□□□ -0.03
UBE2D3-228ENST00000508974 ECHDC3Q96DC8 303 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms