RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 PSTKQ8IV42 348 aaKnown RBP13.11□□□□□ -0.31
HMGCS1-205ENST00000508319 TP53INP2Q8IXH6 220 aa13.11□□□□□ -0.31
HMGCS1-205ENST00000508319 SLC35F3Q8IY50 421 aa13.11□□□□□ -0.31
HMGCS1-205ENST00000508319 MAPK15Q8TD08 544 aa13.11□□□□□ -0.31
HMGCS1-205ENST00000508319 FGF11Q92914 225 aa13.11□□□□□ -0.31
HMGCS1-205ENST00000508319 ZNF653Q96CK0 615 aa13.11□□□□□ -0.31
HMGCS1-205ENST00000508319 ECHDC3Q96DC8 303 aa13.11□□□□□ -0.31
HMGCS1-205ENST00000508319 IL12RB2Q99665 862 aa13.11□□□□□ -0.31
HMGCS1-205ENST00000508319 FUCA2Q9BTY2 467 aa13.11□□□□□ -0.31
HMGCS1-205ENST00000508319 CINPQ9BW66 212 aaPredicted RBP13.11□□□□□ -0.31
HMGCS1-205ENST00000508319 SLC13A1Q9BZW2 595 aa13.11□□□□□ -0.31
HMGCS1-205ENST00000508319 CLPBQ9H078 707 aa13.11□□□□□ -0.31
HMGCS1-205ENST00000508319 ATP13A3Q9H7F0 1226 aa13.11□□□□□ -0.31
HMGCS1-205ENST00000508319 SP110Q9HB58 689 aa13.11□□□□□ -0.31
HMGCS1-205ENST00000508319 CWC15Q9P013 229 aaKnown RBP13.11□□□□□ -0.31
HMGCS1-205ENST00000508319 ATP8A1Q9Y2Q0 1164 aa13.11□□□□□ -0.31
HMGCS1-205ENST00000508319 SCINQ9Y6U3 715 aa13.11□□□□□ -0.31
HMGCS1-205ENST00000508319 CPED1A4D0V7 1026 aa13.1□□□□□ -0.31
HMGCS1-205ENST00000508319 DFFAO00273 331 aa13.1□□□□□ -0.31
HMGCS1-205ENST00000508319 USP12O75317 370 aa13.1□□□□□ -0.31
HMGCS1-205ENST00000508319 PALMO75781 387 aa13.1□□□□□ -0.31
HMGCS1-205ENST00000508319 RNF8O76064 485 aa13.1□□□□□ -0.31
HMGCS1-205ENST00000508319 DXOO77932 396 aaKnown RBP13.1□□□□□ -0.31
HMGCS1-205ENST00000508319 PRKCGP05129 697 aa13.1□□□□□ -0.31
HMGCS1-205ENST00000508319 SKILP12757 684 aa13.1□□□□□ -0.31
HMGCS1-205ENST00000508319 TCF4P15884 667 aa13.1□□□□□ -0.31
HMGCS1-205ENST00000508319 IL1R2P27930 398 aa13.1□□□□□ -0.31
HMGCS1-205ENST00000508319 SERPINA4P29622 427 aa13.1□□□□□ -0.31
HMGCS1-205ENST00000508319 LIG3P49916 1009 aa13.1□□□□□ -0.31
HMGCS1-205ENST00000508319 PEX5P50542 639 aa13.1□□□□□ -0.31
HMGCS1-205ENST00000508319 ADKP55263 362 aaKnown RBP13.1□□□□□ -0.31
HMGCS1-205ENST00000508319 GABREP78334 506 aa13.1□□□□□ -0.31
HMGCS1-205ENST00000508319 PPARDQ03181 441 aa13.1□□□□□ -0.31
HMGCS1-205ENST00000508319 IL10RBQ08334 325 aa13.1□□□□□ -0.31
HMGCS1-205ENST00000508319 KLHL30Q0D2K2 578 aa13.1□□□□□ -0.31
HMGCS1-205ENST00000508319 RALGDSQ12967 914 aa13.1□□□□□ -0.31
HMGCS1-205ENST00000508319 RFTN1Q14699 578 aaPredicted RBP13.1□□□□□ -0.31
HMGCS1-205ENST00000508319 IQCB1Q15051 598 aa13.1□□□□□ -0.31
HMGCS1-205ENST00000508319 NR0B2Q15466 257 aa13.1□□□□□ -0.31
HMGCS1-205ENST00000508319 ISXQ2M1V0 245 aa13.1□□□□□ -0.31
HMGCS1-205ENST00000508319 ALG11Q2TAA5 492 aa13.1□□□□□ -0.31
HMGCS1-205ENST00000508319 PERM1Q5SV97 790 aa13.1□□□□□ -0.31
HMGCS1-205ENST00000508319 ERAP2Q6P179 960 aa13.1□□□□□ -0.31
HMGCS1-205ENST00000508319 CRTC1Q6UUV9 634 aa13.1□□□□□ -0.31
HMGCS1-205ENST00000508319 LRRC69Q6ZNQ3 347 aa13.1□□□□□ -0.31
HMGCS1-205ENST00000508319 NYAP1Q6ZVC0 841 aa13.1□□□□□ -0.31
HMGCS1-205ENST00000508319 SRLQ86TD4 932 aa13.1□□□□□ -0.31
HMGCS1-205ENST00000508319 NSMCE3Q96MG7 304 aa13.1□□□□□ -0.31
HMGCS1-205ENST00000508319 EDEM3Q9BZQ6 932 aa13.1□□□□□ -0.31
HMGCS1-205ENST00000508319 ABCG4Q9H172 646 aa13.1□□□□□ -0.31
HMGCS1-205ENST00000508319 SHROOM3Q8TF72 1996 aa13.09□□□□□ -0.31
HMGCS1-205ENST00000508319 A0A1W2PNU3 283 aaPredicted RBP13.09□□□□□ -0.31
HMGCS1-205ENST00000508319 TRAFD1O14545 582 aaPredicted RBP13.09□□□□□ -0.31
HMGCS1-205ENST00000508319 CASC3O15234 703 aaKnown RBP13.09□□□□□ -0.31
HMGCS1-205ENST00000508319 YY2O15391 372 aa13.09□□□□□ -0.31
HMGCS1-205ENST00000508319 RRP8O43159 456 aaKnown RBP13.09□□□□□ -0.31
HMGCS1-205ENST00000508319 DAPK3O43293 454 aa13.09□□□□□ -0.31
HMGCS1-205ENST00000508319 ANXA6P08133 673 aa13.09□□□□□ -0.31
HMGCS1-205ENST00000508319 MYBL1P10243 752 aa13.09□□□□□ -0.31
HMGCS1-205ENST00000508319 PCK1P35558 622 aa13.09□□□□□ -0.31
HMGCS1-205ENST00000508319 HCAR3P49019 387 aa13.09□□□□□ -0.31
HMGCS1-205ENST00000508319 BLKP51451 505 aa13.09□□□□□ -0.31
HMGCS1-205ENST00000508319 ZNF135P52742 658 aaPredicted RBP13.09□□□□□ -0.31
HMGCS1-205ENST00000508319 HK3P52790 923 aa13.09□□□□□ -0.31
HMGCS1-205ENST00000508319 PDX1P52945 283 aa13.09□□□□□ -0.31
HMGCS1-205ENST00000508319 TLE3Q04726 772 aa13.09□□□□□ -0.31
HMGCS1-205ENST00000508319 MTM1Q13496 603 aa13.09□□□□□ -0.31
HMGCS1-205ENST00000508319 INPP5AQ14642 412 aa13.09□□□□□ -0.31
HMGCS1-205ENST00000508319 NFATC4Q14934 902 aa13.09□□□□□ -0.31
HMGCS1-205ENST00000508319 NR1I3Q14994 352 aa13.09□□□□□ -0.31
HMGCS1-205ENST00000508319 DPYSL2Q16555 572 aa13.09□□□□□ -0.31
HMGCS1-205ENST00000508319 SMTNL2Q2TAL5 461 aa13.09□□□□□ -0.31
HMGCS1-205ENST00000508319 FIGNQ5HY92 759 aa13.09□□□□□ -0.31
HMGCS1-205ENST00000508319 FAXCQ5TGI0 409 aa13.09□□□□□ -0.31
HMGCS1-205ENST00000508319 HGSNATQ68CP4 663 aa13.09□□□□□ -0.31
HMGCS1-205ENST00000508319 KCTD16Q68DU8 428 aa13.09□□□□□ -0.31
HMGCS1-205ENST00000508319 PLA2G15Q8NCC3 412 aa13.09□□□□□ -0.31
HMGCS1-205ENST00000508319 PCDH19Q8TAB3 1148 aa13.09□□□□□ -0.31
HMGCS1-205ENST00000508319 TSACCQ96A04 125 aaPredicted RBP13.09□□□□□ -0.31
HMGCS1-205ENST00000508319 TRIM11Q96F44 468 aa13.09□□□□□ -0.31
HMGCS1-205ENST00000508319 PDXPQ96GD0 296 aa13.09□□□□□ -0.31
HMGCS1-205ENST00000508319 HIC2Q96JB3 615 aa13.09□□□□□ -0.31
HMGCS1-205ENST00000508319 PSKH2Q96QS6 385 aa13.09□□□□□ -0.31
HMGCS1-205ENST00000508319 HELZ2Q9BYK8 2649 aaKnown RBP13.09□□□□□ -0.31
HMGCS1-205ENST00000508319 ISCUQ9H1K1 167 aa13.09□□□□□ -0.31
HMGCS1-205ENST00000508319 PRORYQ9H606 182 aa13.09□□□□□ -0.31
HMGCS1-205ENST00000508319 ASCL3Q9NQ33 180 aa13.09□□□□□ -0.31
HMGCS1-205ENST00000508319 OR1A2Q9Y585 309 aa13.09□□□□□ -0.31
HMGCS1-205ENST00000508319 RAI2Q9Y5P3 530 aa13.09□□□□□ -0.31
HMGCS1-205ENST00000508319 TMEM110-MUSTN1A8MSY1 372 aa13.08□□□□□ -0.32
HMGCS1-205ENST00000508319 TCEA3O75764 348 aa13.08□□□□□ -0.32
HMGCS1-205ENST00000508319 PEX11BO96011 259 aa13.08□□□□□ -0.32
HMGCS1-205ENST00000508319 PCCBP05166 539 aa13.08□□□□□ -0.32
HMGCS1-205ENST00000508319 GM2AP17900 193 aa13.08□□□□□ -0.32
HMGCS1-205ENST00000508319 HTR1BP28222 390 aa13.08□□□□□ -0.32
HMGCS1-205ENST00000508319 PBX1P40424 430 aa13.08□□□□□ -0.32
HMGCS1-205ENST00000508319 LSSP48449 732 aa13.08□□□□□ -0.32
HMGCS1-205ENST00000508319 RPIAP49247 311 aa13.08□□□□□ -0.32
HMGCS1-205ENST00000508319 PCBP4P57723 403 aaKnown RBP13.08□□□□□ -0.32
HMGCS1-205ENST00000508319 AP1S1P61966 158 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms