RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 TKTL2Q9H0I9 626 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 MUC3BQ9H195 1237 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 ADAMTS10Q9H324 1103 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 ELP3Q9H9T3 547 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 ARHGEF38Q9NXL2 777 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 OR12D3Q9UGF7 316 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 DFFAO00273 331 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 BMP2P12643 396 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 CPB1P15086 417 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 DNAJB1P25685 340 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 HCAR3P49019 387 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 PFKPQ01813 784 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 NOMO2Q5JPE7 1267 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 FAM45BPQ6NSW5 357 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 LIMS2Q7Z4I7 341 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 FAM45AQ8TCE6 357 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 C3orf30Q96M34 536 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 ZNF560Q96MR9 790 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 VAT1Q99536 393 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 SLC25A23Q9BV35 468 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 COLEC11Q9BWP8 271 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 GIMAP2Q9UG22 337 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 EGFL7Q9UHF1 273 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 COL1A2P08123 1366 aa13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 A0A087X1B8 175 aa13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 NME4O00746 187 aa13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 IPO13O94829 963 aaKnown RBP13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 ATE1O95260 518 aa13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 ALDOCP09972 364 aaKnown RBP13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 ADCYAP1R1P41586 468 aa13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 SLC12A2P55011 1212 aa13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 LILRA4P59901 499 aa13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 SEPT6Q14141 434 aa13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 INTS6LQ5JSJ4 861 aaKnown RBP13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 TBCELQ5QJ74 424 aa13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 WSCD1Q658N2 575 aa13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 TTC33Q6PID6 262 aaPredicted RBP13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 SPPL2CQ8IUH8 684 aa13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 C2CD4AQ8NCU7 369 aaPredicted RBP13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 PPHLN1Q8NEY8 458 aaKnown RBP13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 GFM2Q969S9 779 aaKnown RBP13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 SLC45A3Q96JT2 553 aa13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 CAMKK2Q96RR4 588 aa13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 TRIM8Q9BZR9 551 aa13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 BRD8Q9H0E9 1235 aa13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 PLGRKTQ9HBL7 147 aa13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 FBXO5Q9UKT4 447 aa13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 TCAF1Q9Y4C2 921 aa13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 SH3PXD2BA1X283 911 aa13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 BOLA2-SMG1P6H3BVE0 249 aa13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 FZD9O00144 591 aa13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 ATP6V1G1O75348 118 aa13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 PMPCBO75439 489 aa13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 CD4P01730 458 aa13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 NUP107P57740 925 aa13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 PSMD5Q16401 504 aa13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 ZBED5Q49AG3 693 aa13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 KCTD21Q4G0X4 260 aa13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 NOTUMQ6P988 496 aa13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 Q6ZNX1 250 aa13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 SHCBP1Q8NEM2 672 aa13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 ANKRD49Q8WVL7 239 aa13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 UPF3AQ9H1J1 476 aaKnown RBP13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 GSTO2Q9H4Y5 243 aa13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 FAIMQ9NVQ4 179 aa13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 ARMC1Q9NVT9 282 aa13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 TRAF6Q9Y4K3 522 aa13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 PTGDR2Q9Y5Y4 395 aa13.5□□□□□ -0.25
SNCAIP-209ENST00000508017 A0A087WXM4 84 aa13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 A0A0G2JLL6 359 aaPredicted RBP13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 TRIM64CA6NLI5 447 aa13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 NR5A2O00482 541 aa13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 CACNG3O60359 315 aa13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 WARSP23381 471 aaKnown RBP13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 TPP2P29144 1249 aaPredicted RBP13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 OXTRP30559 389 aa13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 SLC5A3P53794 718 aa13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 AIF1P55008 147 aa13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 ESRRGP62508 458 aa13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 CCNA1P78396 465 aa13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 FAM83EQ2M2I3 478 aa13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 MAP7D1Q3KQU3 841 aa13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 SV2CQ496J9 727 aa13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 RWDD4Q6NW29 188 aaKnown RBP13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 LARP4Q71RC2 724 aaKnown RBP eCLIP13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 LYSMD3Q7Z3D4 306 aa13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 PRRT2Q7Z6L0 340 aaPredicted RBP13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 SMYD1Q8NB12 490 aa13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 PPTC7Q8NI37 304 aa13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 SH3RF2Q8TEC5 729 aa13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 FBXL20Q96IG2 436 aa13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 FAR2Q96K12 515 aa13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 SMOQ99835 787 aa13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 ADI1Q9BV57 179 aa13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 WDCPQ9H6R7 721 aa13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 EML4Q9HC35 981 aaKnown RBP13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 CRTAC1Q9NQ79 661 aa13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 VPS45Q9NRW7 570 aa13.49□□□□□ -0.25
SNCAIP-209ENST00000508017 MAP10Q9P2G4 905 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms