RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 GAB3Q8WWW8 586 aa20.21■□□□□ 0.83
USP53-203ENST00000507597 FOXJ1Q92949 421 aa20.21■□□□□ 0.83
USP53-203ENST00000507597 FAM131CQ96AQ9 280 aa20.21■□□□□ 0.83
USP53-203ENST00000507597 TOE1Q96GM8 510 aaKnown RBP20.21■□□□□ 0.83
USP53-203ENST00000507597 ETNK1Q9HBU6 452 aa20.21■□□□□ 0.83
USP53-203ENST00000507597 KCTD5Q9NXV2 234 aa20.21■□□□□ 0.83
USP53-203ENST00000507597 ASIC3Q9UHC3 531 aa20.21■□□□□ 0.83
USP53-203ENST00000507597 PPIL1Q9Y3C6 166 aa20.21■□□□□ 0.83
USP53-203ENST00000507597 IGHV1OR15-9A0A0B4J2B8 117 aa20.2■□□□□ 0.82
USP53-203ENST00000507597 ANKRD66B4E2M5 251 aa20.2■□□□□ 0.82
USP53-203ENST00000507597 SMAPO00193 183 aa20.2■□□□□ 0.82
USP53-203ENST00000507597 GJB3O75712 270 aa20.2■□□□□ 0.82
USP53-203ENST00000507597 RHOBTB1O94844 696 aa20.2■□□□□ 0.82
USP53-203ENST00000507597 SEMA4FO95754 770 aa20.2■□□□□ 0.82
USP53-203ENST00000507597 FGF1P05230 155 aa20.2■□□□□ 0.82
USP53-203ENST00000507597 NUDT1P36639 197 aa20.2■□□□□ 0.82
USP53-203ENST00000507597 ADCY8P40145 1251 aa20.2■□□□□ 0.82
USP53-203ENST00000507597 GPS1Q13098 491 aa20.2■□□□□ 0.82
USP53-203ENST00000507597 SEMA5AQ13591 1074 aa20.2■□□□□ 0.82
USP53-203ENST00000507597 ARHGEF7Q14155 803 aa20.2■□□□□ 0.82
USP53-203ENST00000507597 PIP5KL1Q5T9C9 394 aa20.2■□□□□ 0.82
USP53-203ENST00000507597 AGBL4Q5VU57 503 aa20.2■□□□□ 0.82
USP53-203ENST00000507597 CEP68Q76N32 757 aa20.2■□□□□ 0.82
USP53-203ENST00000507597 FAM124AQ86V42 546 aa20.2■□□□□ 0.82
USP53-203ENST00000507597 BBOF1Q8ND07 529 aa20.2■□□□□ 0.82
USP53-203ENST00000507597 LPCAT1Q8NF37 534 aa20.2■□□□□ 0.82
USP53-203ENST00000507597 CADM4Q8NFZ8 388 aa20.2■□□□□ 0.82
USP53-203ENST00000507597 CXorf40AQ8TE69 158 aa20.2■□□□□ 0.82
USP53-203ENST00000507597 NELL1Q92832 810 aa20.2■□□□□ 0.82
USP53-203ENST00000507597 SCRN2Q96FV2 425 aa20.2■□□□□ 0.82
USP53-203ENST00000507597 RAB17Q9H0T7 212 aa20.2■□□□□ 0.82
USP53-203ENST00000507597 EIF2B3Q9NR50 452 aaKnown RBP20.2■□□□□ 0.82
USP53-203ENST00000507597 HACD3Q9P035 362 aa20.2■□□□□ 0.82
USP53-203ENST00000507597 ZDBF2Q9HCK1 2354 aa20.19■□□□□ 0.82
USP53-203ENST00000507597 LOC285095A0A1B0GVY8 99 aa20.19■□□□□ 0.82
USP53-203ENST00000507597 RIOK3O14730 519 aaKnown RBP20.19■□□□□ 0.82
USP53-203ENST00000507597 PCDH8O95206 1070 aa20.19■□□□□ 0.82
USP53-203ENST00000507597 METTL18O95568 372 aa20.19■□□□□ 0.82
USP53-203ENST00000507597 AP2A1O95782 977 aa20.19■□□□□ 0.82
USP53-203ENST00000507597 ETS1P14921 441 aa20.19■□□□□ 0.82
USP53-203ENST00000507597 PTPN5P54829 565 aa20.19■□□□□ 0.82
USP53-203ENST00000507597 ADPRHP54922 357 aa20.19■□□□□ 0.82
USP53-203ENST00000507597 FAM193AP78312 1265 aa20.19■□□□□ 0.82
USP53-203ENST00000507597 PTK6Q13882 451 aa20.19■□□□□ 0.82
USP53-203ENST00000507597 ELF2Q15723 593 aa20.19■□□□□ 0.82
USP53-203ENST00000507597 KIAA1161Q6NSJ0 714 aa20.19■□□□□ 0.82
USP53-203ENST00000507597 KDELC1Q6UW63 502 aa20.19■□□□□ 0.82
USP53-203ENST00000507597 PPP1R21Q6ZMI0 780 aa20.19■□□□□ 0.82
USP53-203ENST00000507597 LPCAT2Q7L5N7 544 aa20.19■□□□□ 0.82
USP53-203ENST00000507597 KLHDC8BQ8IXV7 354 aa20.19■□□□□ 0.82
USP53-203ENST00000507597 ZBTB44Q8NCP5 570 aa20.19■□□□□ 0.82
USP53-203ENST00000507597 PIH1D2Q8WWB5 315 aa20.19■□□□□ 0.82
USP53-203ENST00000507597 OXNAD1Q96HP4 312 aaPredicted RBP20.19■□□□□ 0.82
USP53-203ENST00000507597 TBL1YQ9BQ87 522 aa20.19■□□□□ 0.82
USP53-203ENST00000507597 C1QTNF7Q9BXJ2 289 aa20.19■□□□□ 0.82
USP53-203ENST00000507597 TRABDQ9H4I3 376 aa20.19■□□□□ 0.82
USP53-203ENST00000507597 UTP11Q9Y3A2 253 aaKnown RBP20.19■□□□□ 0.82
USP53-203ENST00000507597 FADS3Q9Y5Q0 445 aa20.19■□□□□ 0.82
USP53-203ENST00000507597 A0A0J9YYE9 177 aa20.18■□□□□ 0.82
USP53-203ENST00000507597 H0Y858 1186 aa20.18■□□□□ 0.82
USP53-203ENST00000507597 TRBC1P01850 177 aa20.18■□□□□ 0.82
USP53-203ENST00000507597 APRTP07741 180 aa20.18■□□□□ 0.82
USP53-203ENST00000507597 ZSCAN5DPP0CG00 497 aa20.18■□□□□ 0.82
USP53-203ENST00000507597 ZNF30P17039 623 aa20.18■□□□□ 0.82
USP53-203ENST00000507597 RPS21P63220 83 aaKnown RBP20.18■□□□□ 0.82
USP53-203ENST00000507597 TUBB4BP68371 445 aa20.18■□□□□ 0.82
USP53-203ENST00000507597 RPL6Q02878 288 aaKnown RBP20.18■□□□□ 0.82
USP53-203ENST00000507597 C2orf54Q08AI8 447 aa20.18■□□□□ 0.82
USP53-203ENST00000507597 LAMB3Q13751 1172 aa20.18■□□□□ 0.82
USP53-203ENST00000507597 TRIP13Q15645 432 aaPredicted RBP20.18■□□□□ 0.82
USP53-203ENST00000507597 SLC1A5Q15758 541 aa20.18■□□□□ 0.82
USP53-203ENST00000507597 GLE1Q53GS7 698 aaKnown RBP20.18■□□□□ 0.82
USP53-203ENST00000507597 SYCP2LQ5T4T6 812 aa20.18■□□□□ 0.82
USP53-203ENST00000507597 KDELC2Q7Z4H8 507 aa20.18■□□□□ 0.82
USP53-203ENST00000507597 RAVER1Q8IY67 606 aaKnown RBP20.18■□□□□ 0.82
USP53-203ENST00000507597 PDCD7Q8N8D1 485 aaKnown RBP20.18■□□□□ 0.82
USP53-203ENST00000507597 RLN3Q8WXF3 142 aa20.18■□□□□ 0.82
USP53-203ENST00000507597 MRGPRX2Q96LB1 330 aa20.18■□□□□ 0.82
USP53-203ENST00000507597 FICDQ9BVA6 458 aa20.18■□□□□ 0.82
USP53-203ENST00000507597 PCDH12Q9NPG4 1184 aa20.18■□□□□ 0.82
USP53-203ENST00000507597 RAB23Q9ULC3 237 aa20.18■□□□□ 0.82
USP53-203ENST00000507597 HCN4Q9Y3Q4 1203 aa20.18■□□□□ 0.82
USP53-203ENST00000507597 FAM47DPA6NHR8 397 aa20.17■□□□□ 0.82
USP53-203ENST00000507597 F5H423 210 aaPredicted RBP20.17■□□□□ 0.82
USP53-203ENST00000507597 PDHA1P08559 390 aa20.17■□□□□ 0.82
USP53-203ENST00000507597 VIPR1P32241 457 aa20.17■□□□□ 0.82
USP53-203ENST00000507597 DPP6P42658 865 aa20.17■□□□□ 0.82
USP53-203ENST00000507597 VPS41P49754 854 aa20.17■□□□□ 0.82
USP53-203ENST00000507597 PDE1BQ01064 536 aa20.17■□□□□ 0.82
USP53-203ENST00000507597 DMWDQ09019 674 aa20.17■□□□□ 0.82
USP53-203ENST00000507597 TMEM52BQ4KMG9 183 aa20.17■□□□□ 0.82
USP53-203ENST00000507597 C8orf74Q6P047 294 aa20.17■□□□□ 0.82
USP53-203ENST00000507597 RANBP10Q6VN20 620 aa20.17■□□□□ 0.82
USP53-203ENST00000507597 JAMLQ86YT9 394 aa20.17■□□□□ 0.82
USP53-203ENST00000507597 DNAAF3Q8N9W5 541 aa20.17■□□□□ 0.82
USP53-203ENST00000507597 TRIB3Q96RU7 358 aa20.17■□□□□ 0.82
USP53-203ENST00000507597 GPR174Q9BXC1 333 aa20.17■□□□□ 0.82
USP53-203ENST00000507597 MAGEE1Q9HCI5 957 aa20.17■□□□□ 0.82
USP53-203ENST00000507597 SERGEFQ9UGK8 458 aa20.17■□□□□ 0.82
USP53-203ENST00000507597 PSMD11O00231 422 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms