RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 PPARGC1AQ9UBK2 798 aaKnown RBP9.5□□□□□ -0.89
NEK1-203ENST00000507142 WNT9AO14904 365 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 CDH16O75309 829 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 NOL4O94818 638 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 AGTP01019 485 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 ACVRL1P37023 503 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 USP46P62068 366 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 RFTN1Q14699 578 aaPredicted RBP9.49□□□□□ -0.89
NEK1-203ENST00000507142 CASP8Q14790 479 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 KBTBD6Q86V97 674 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 MMGT1Q8N4V1 131 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 HDAC10Q969S8 669 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 ACOX2Q99424 681 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 FBXO6Q9NRD1 293 aaPredicted RBP9.49□□□□□ -0.89
NEK1-203ENST00000507142 C6orf203Q9P0P8 240 aaPredicted RBP9.49□□□□□ -0.89
NEK1-203ENST00000507142 PSMD13Q9UNM6 376 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 ARIH1Q9Y4X5 557 aaPredicted RBP9.49□□□□□ -0.89
NEK1-203ENST00000507142 STC2O76061 302 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 MARCKSL1P49006 195 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 ALDH9A1P49189 494 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 MLLT6P55198 1093 aaPredicted RBP9.49□□□□□ -0.89
NEK1-203ENST00000507142 C6orf10Q5SRN2 563 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 SLC8B1Q6J4K2 584 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 PARGQ86W56 976 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 OR4L1Q8NH43 312 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 XYLT2Q9H1B5 865 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 GDF3Q9NR23 364 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 INTS7Q9NVH2 962 aaKnown RBP9.49□□□□□ -0.89
NEK1-203ENST00000507142 PNMA8BQ9ULN7 279 aaPredicted RBP9.49□□□□□ -0.89
NEK1-203ENST00000507142 ARHGAP26Q9UNA1 814 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 DNALI1O14645 258 aaPredicted RBP9.49□□□□□ -0.89
NEK1-203ENST00000507142 SH3BGRLO75368 114 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 KATNA1O75449 491 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 APBB3O95704 486 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 IFNA16P05015 189 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 LMAN2Q12907 356 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 CDC16Q13042 620 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 FAM78AQ5JUQ0 283 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 GPRIN1Q7Z2K8 1008 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 EFL1Q7Z2Z2 1120 aaKnown RBP9.49□□□□□ -0.89
NEK1-203ENST00000507142 TMEM25Q86YD3 366 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 SORCS1Q8WY21 1168 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 PITPNM3Q9BZ71 974 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 SHCBP1LQ9BZQ2 653 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.49□□□□□ -0.89
NEK1-203ENST00000507142 NOCTQ9UK39 431 aaKnown RBP9.49□□□□□ -0.89
NEK1-203ENST00000507142 ANKDD1BA6NHY2 528 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 HMGB1P1B2RPK0 211 aaPredicted RBP9.49□□□□□ -0.89
NEK1-203ENST00000507142 FAM47E-STBD1D6RA91 191 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 TULP3O75386 442 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 HPGDP15428 266 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 CHRNB2P17787 502 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 NR1D1P20393 614 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 JAM2P57087 298 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 TAF11Q15544 211 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 FSCBQ5H9T9 825 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 SCARA3Q6AZY7 606 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 GPR149Q86SP6 731 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 GKN2Q86XP6 184 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 RTP3Q9BQQ7 232 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 VRTNQ9H8Y1 702 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 AK5Q9Y6K8 562 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 SCN4AP35499 1836 aa9.49□□□□□ -0.89
NEK1-203ENST00000507142 ALAS2P22557 587 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 FAM189BP81408 668 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 EIF4HQ15056 248 aaKnown RBP9.48□□□□□ -0.89
NEK1-203ENST00000507142 MLF2Q15773 248 aaPredicted RBP9.48□□□□□ -0.89
NEK1-203ENST00000507142 STXBP5Q5T5C0 1151 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 CFAP206Q8IYR0 622 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 Q8N9G6 341 aaPredicted RBP9.48□□□□□ -0.89
NEK1-203ENST00000507142 VPS37AQ8NEZ2 397 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 LRRC15Q8TF66 581 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 NTAN1Q96AB6 310 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 CLIP3Q96DZ5 547 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 PPCSQ9HAB8 311 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 YBX2Q9Y2T7 364 aaKnown RBP9.48□□□□□ -0.89
NEK1-203ENST00000507142 C5orf60A6NFR6 353 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 GCATO75600 419 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 TPBGLP0DKB5 382 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 KRT4P19013 534 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 CXCR2P25025 360 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 TNK2Q07912 1038 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 HNRNPDQ14103 355 aaKnown RBP9.48□□□□□ -0.89
NEK1-203ENST00000507142 BRAT1Q6PJG6 821 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 ZNF614Q8N883 585 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 DCAF4L2Q8NA75 395 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 SHKBP1Q8TBC3 707 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 LRCH3Q96II8 777 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 ARHGAP9Q9BRR9 750 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 TBC1D17Q9HA65 648 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 LIASO43766 372 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 SCNN1AP37088 669 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 CCR3P51677 355 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 LRRC74AQ0VAA2 488 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 TBX2Q13207 712 aaPredicted RBP9.48□□□□□ -0.89
NEK1-203ENST00000507142 SF1Q15637 639 aaKnown RBP9.48□□□□□ -0.89
NEK1-203ENST00000507142 TANGO2Q6ICL3 276 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 SLC30A9Q6PML9 568 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 C10orf67Q8IYJ2 551 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 C2orf73Q8N5S3 287 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms