RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 INO80B-WBP1J3KQ70 363 aa17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 GPC4O75487 556 aa17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 AHSGP02765 367 aa17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 HSD17B1P14061 328 aa17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 OXTRP30559 389 aa17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 IDUAP35475 653 aa17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 KPNA1P52294 538 aaPredicted RBP17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 RAB10P61026 200 aa17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 CXCL9Q07325 125 aa17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 TMEM132AQ24JP5 1023 aa17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 RETREG3Q86VR2 466 aa17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 FAM131BQ86XD5 332 aa17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 CEP97Q8IW35 865 aa17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 USP33Q8TEY7 942 aa17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 RNF139Q8WU17 664 aa17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 HDAC10Q969S8 669 aa17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 CSF3RQ99062 836 aa17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 DAPK2Q9UIK4 370 aa17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 MAGED2Q9UNF1 606 aaPredicted RBP17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 IGKV6-21A0A0C4DH24 114 aa17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 DYTNA2CJ06 578 aa17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 CCDC78A2IDD5 438 aa17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 ERI2A8K979 691 aaKnown RBP17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 FARP2O94887 1054 aaPredicted RBP17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 STAU1O95793 577 aaKnown RBP17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 PABPC1P11940 636 aaKnown RBP17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 CYP2B6P20813 491 aa17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 ATP4BP51164 291 aa17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 ADARB1P78563 741 aaKnown RBP17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 STXBP2Q15833 593 aa17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 GTF2IRD2BQ6EKJ0 949 aa17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 ACOT1Q86TX2 421 aa17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 GTF2IRD2Q86UP8 949 aa17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 DDIASQ8IXT1 998 aa17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 SPATA6LQ8N4H0 392 aa17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 TRPV3Q8NET8 790 aa17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 DCPSQ96C86 337 aaKnown RBP17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 MRPL57Q9BQC6 102 aaKnown RBP17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 MLPHQ9BV36 600 aaPredicted RBP17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 FANCEQ9HB96 536 aa17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 ACTR3BQ9P1U1 418 aa17.2■□□□□ 0.34
SQSTM1-211ENST00000506690 GAS2O43903 313 aaKnown RBP17.19■□□□□ 0.34
SQSTM1-211ENST00000506690 UBA1P22314 1058 aaKnown RBP17.19■□□□□ 0.34
SQSTM1-211ENST00000506690 ATP5F1P24539 256 aaPredicted RBP17.19■□□□□ 0.34
SQSTM1-211ENST00000506690 SCNN1AP37088 669 aa17.19■□□□□ 0.34
SQSTM1-211ENST00000506690 RPS9P46781 194 aaKnown RBP17.19■□□□□ 0.34
SQSTM1-211ENST00000506690 OAZ1P54368 228 aa17.19■□□□□ 0.34
SQSTM1-211ENST00000506690 GJA9P57773 515 aa17.19■□□□□ 0.34
SQSTM1-211ENST00000506690 BNIP2Q12982 314 aa17.19■□□□□ 0.34
SQSTM1-211ENST00000506690 FAM160B1Q5W0V3 765 aa17.19■□□□□ 0.34
SQSTM1-211ENST00000506690 XAF1Q6GPH4 301 aa17.19■□□□□ 0.34
SQSTM1-211ENST00000506690 MFSD6LQ8IWD5 586 aa17.19■□□□□ 0.34
SQSTM1-211ENST00000506690 CADM3Q8N126 398 aa17.19■□□□□ 0.34
SQSTM1-211ENST00000506690 AFAP1L2Q8N4X5 818 aa17.19■□□□□ 0.34
SQSTM1-211ENST00000506690 AGBL3Q8NEM8 1001 aa17.19■□□□□ 0.34
SQSTM1-211ENST00000506690 ABHD11Q8NFV4 315 aa17.19■□□□□ 0.34
SQSTM1-211ENST00000506690 EFHD2Q96C19 240 aaPredicted RBP17.19■□□□□ 0.34
SQSTM1-211ENST00000506690 LRCH3Q96II8 777 aa17.19■□□□□ 0.34
SQSTM1-211ENST00000506690 ZNF668Q96K58 619 aaPredicted RBP17.19■□□□□ 0.34
SQSTM1-211ENST00000506690 HOPXQ9BPY8 73 aaPredicted RBP17.19■□□□□ 0.34
SQSTM1-211ENST00000506690 ASB7Q9H672 318 aa17.19■□□□□ 0.34
SQSTM1-211ENST00000506690 SETD4Q9NVD3 440 aa17.19■□□□□ 0.34
SQSTM1-211ENST00000506690 SCHIP1Q9P0W5 487 aaPredicted RBP17.19■□□□□ 0.34
SQSTM1-211ENST00000506690 VWA7Q9Y334 891 aa17.19■□□□□ 0.34
SQSTM1-211ENST00000506690 SPTLC1O15269 473 aa17.19■□□□□ 0.34
SQSTM1-211ENST00000506690 FCGR1AP12314 374 aa17.19■□□□□ 0.34
SQSTM1-211ENST00000506690 OPRL1P41146 370 aa17.19■□□□□ 0.34
SQSTM1-211ENST00000506690 POLD2P49005 469 aa17.19■□□□□ 0.34
SQSTM1-211ENST00000506690 BTLAQ7Z6A9 289 aa17.19■□□□□ 0.34
SQSTM1-211ENST00000506690 SH3YL1Q96HL8 342 aaPredicted RBP17.19■□□□□ 0.34
SQSTM1-211ENST00000506690 RAD21L1Q9H4I0 556 aa17.19■□□□□ 0.34
SQSTM1-211ENST00000506690 SOX17Q9H6I2 414 aaPredicted RBP17.19■□□□□ 0.34
SQSTM1-211ENST00000506690 MAP10Q9P2G4 905 aa17.19■□□□□ 0.34
SQSTM1-211ENST00000506690 EGFL7Q9UHF1 273 aa17.19■□□□□ 0.34
SQSTM1-211ENST00000506690 NEMP2A6NFY4 417 aa17.18■□□□□ 0.34
SQSTM1-211ENST00000506690 BBIP1A8MTZ0 92 aa17.18■□□□□ 0.34
SQSTM1-211ENST00000506690 ZBTB42B2RXF5 422 aa17.18■□□□□ 0.34
SQSTM1-211ENST00000506690 KCNH1O95259 989 aa17.18■□□□□ 0.34
SQSTM1-211ENST00000506690 GPIP06744 558 aa17.18■□□□□ 0.34
SQSTM1-211ENST00000506690 MBTD1Q05BQ5 628 aa17.18■□□□□ 0.34
SQSTM1-211ENST00000506690 CBX2Q14781 532 aaPredicted RBP17.18■□□□□ 0.34
SQSTM1-211ENST00000506690 PLCL1Q15111 1095 aa17.18■□□□□ 0.34
SQSTM1-211ENST00000506690 DALRD3Q5D0E6 543 aaKnown RBP17.18■□□□□ 0.34
SQSTM1-211ENST00000506690 CYHR1Q6ZMK1 362 aa17.18■□□□□ 0.34
SQSTM1-211ENST00000506690 LARP4Q71RC2 724 aaKnown RBP eCLIP17.18■□□□□ 0.34
SQSTM1-211ENST00000506690 CUZD1Q86UP6 607 aa17.18■□□□□ 0.34
SQSTM1-211ENST00000506690 NT5DC4Q86YG4 428 aa17.18■□□□□ 0.34
SQSTM1-211ENST00000506690 TMCO5AQ8N6Q1 288 aa17.18■□□□□ 0.34
SQSTM1-211ENST00000506690 ZC3H15Q8WU90 426 aaKnown RBP17.18■□□□□ 0.34
SQSTM1-211ENST00000506690 CGREF1Q99674 301 aa17.18■□□□□ 0.34
SQSTM1-211ENST00000506690 MINDY3Q9H8M7 445 aa17.18■□□□□ 0.34
SQSTM1-211ENST00000506690 EML4Q9HC35 981 aaKnown RBP17.18■□□□□ 0.34
SQSTM1-211ENST00000506690 CLDN25C9JDP6 229 aa17.18■□□□□ 0.34
SQSTM1-211ENST00000506690 ZBTB24O43167 697 aaPredicted RBP17.18■□□□□ 0.34
SQSTM1-211ENST00000506690 SNAP29O95721 258 aa17.18■□□□□ 0.34
SQSTM1-211ENST00000506690 GJB1P08034 283 aa17.18■□□□□ 0.34
SQSTM1-211ENST00000506690 IQCF3P0C7M6 154 aa17.18■□□□□ 0.34
SQSTM1-211ENST00000506690 STMN1P16949 149 aa17.18■□□□□ 0.34
SQSTM1-211ENST00000506690 TPH1P17752 444 aa17.18■□□□□ 0.34
SQSTM1-211ENST00000506690 CD68P34810 354 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms