RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 MRPL57Q9BQC6 102 aaKnown RBP15.99■□□□□ 0.15
SCLT1-208ENST00000506368 C11orf84Q9BUA3 381 aaPredicted RBP15.99■□□□□ 0.15
SCLT1-208ENST00000506368 USP3Q9Y6I4 520 aa15.99■□□□□ 0.15
SCLT1-208ENST00000506368 SPATA31C2B4DYI2 1134 aa15.99■□□□□ 0.15
SCLT1-208ENST00000506368 DEAF1O75398 565 aaPredicted RBP15.99■□□□□ 0.15
SCLT1-208ENST00000506368 JUNP05412 331 aaKnown RBP15.99■□□□□ 0.15
SCLT1-208ENST00000506368 KRT19P08727 400 aa15.99■□□□□ 0.15
SCLT1-208ENST00000506368 ATP5F1P24539 256 aaPredicted RBP15.99■□□□□ 0.15
SCLT1-208ENST00000506368 PSMB4P28070 264 aa15.99■□□□□ 0.15
SCLT1-208ENST00000506368 APLP1P51693 650 aa15.99■□□□□ 0.15
SCLT1-208ENST00000506368 TRIM32Q13049 653 aa15.99■□□□□ 0.15
SCLT1-208ENST00000506368 RAB6CQ53S08 254 aa15.99■□□□□ 0.15
SCLT1-208ENST00000506368 DDIASQ8IXT1 998 aa15.99■□□□□ 0.15
SCLT1-208ENST00000506368 ATP6V0D2Q8N8Y2 350 aa15.99■□□□□ 0.15
SCLT1-208ENST00000506368 OSCP1Q8WVF1 389 aa15.99■□□□□ 0.15
SCLT1-208ENST00000506368 BTN2A3PQ96KV6 586 aa15.99■□□□□ 0.15
SCLT1-208ENST00000506368 CYP2S1Q96SQ9 504 aa15.99■□□□□ 0.15
SCLT1-208ENST00000506368 NAA50Q9GZZ1 169 aaKnown RBP15.99■□□□□ 0.15
SCLT1-208ENST00000506368 RAB6CQ9H0N0 254 aa15.99■□□□□ 0.15
SCLT1-208ENST00000506368 CAB39LQ9H9S4 337 aa15.99■□□□□ 0.15
SCLT1-208ENST00000506368 VTA1Q9NP79 307 aa15.99■□□□□ 0.15
SCLT1-208ENST00000506368 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.99■□□□□ 0.15
SCLT1-208ENST00000506368 TSPAN16Q9UKR8 245 aa15.99■□□□□ 0.15
SCLT1-208ENST00000506368 SLC39A10Q9ULF5 831 aa15.99■□□□□ 0.15
SCLT1-208ENST00000506368 AURKCQ9UQB9 309 aa15.99■□□□□ 0.15
SCLT1-208ENST00000506368 PHIPQ8WWQ0 1821 aa15.99■□□□□ 0.15
SCLT1-208ENST00000506368 KIAA1217Q5T5P2 1943 aa15.99■□□□□ 0.15
SCLT1-208ENST00000506368 A0A087X1B8 175 aa15.98■□□□□ 0.15
SCLT1-208ENST00000506368 SLC22A1O15245 554 aa15.98■□□□□ 0.15
SCLT1-208ENST00000506368 SPTLC1O15269 473 aa15.98■□□□□ 0.15
SCLT1-208ENST00000506368 PRKCBP05771 671 aa15.98■□□□□ 0.15
SCLT1-208ENST00000506368 POLR2EP19388 210 aaKnown RBP15.98■□□□□ 0.15
SCLT1-208ENST00000506368 NFKBIAP25963 317 aa15.98■□□□□ 0.15
SCLT1-208ENST00000506368 CDH8P55286 799 aa15.98■□□□□ 0.15
SCLT1-208ENST00000506368 TNK2Q07912 1038 aa15.98■□□□□ 0.15
SCLT1-208ENST00000506368 EPS8Q12929 822 aa15.98■□□□□ 0.15
SCLT1-208ENST00000506368 DGKZQ13574 1117 aa15.98■□□□□ 0.15
SCLT1-208ENST00000506368 MXD4Q14582 209 aaPredicted RBP15.98■□□□□ 0.15
SCLT1-208ENST00000506368 USP10Q14694 798 aaKnown RBP15.98■□□□□ 0.15
SCLT1-208ENST00000506368 SKIV2LQ15477 1246 aaKnown RBP15.98■□□□□ 0.15
SCLT1-208ENST00000506368 DLG2Q15700 870 aa15.98■□□□□ 0.15
SCLT1-208ENST00000506368 ARL13BQ3SXY8 428 aa15.98■□□□□ 0.15
SCLT1-208ENST00000506368 AASDHQ4L235 1098 aaPredicted RBP15.98■□□□□ 0.15
SCLT1-208ENST00000506368 IER5Q5VY09 327 aa15.98■□□□□ 0.15
SCLT1-208ENST00000506368 BSPRYQ5W0U4 402 aa15.98■□□□□ 0.15
SCLT1-208ENST00000506368 FKBP9P1Q75LS8 142 aa15.98■□□□□ 0.15
SCLT1-208ENST00000506368 STRADAQ7RTN6 431 aa15.98■□□□□ 0.15
SCLT1-208ENST00000506368 CADM3Q8N126 398 aa15.98■□□□□ 0.15
SCLT1-208ENST00000506368 HMGCLL1Q8TB92 370 aa15.98■□□□□ 0.15
SCLT1-208ENST00000506368 UBA3Q8TBC4 463 aa15.98■□□□□ 0.15
SCLT1-208ENST00000506368 TSPAN18Q96SJ8 248 aa15.98■□□□□ 0.15
SCLT1-208ENST00000506368 TRMOQ9BU70 441 aa15.98■□□□□ 0.15
SCLT1-208ENST00000506368 CPNE5Q9HCH3 593 aa15.98■□□□□ 0.15
SCLT1-208ENST00000506368 AKIP1Q9NQ31 210 aa15.98■□□□□ 0.15
SCLT1-208ENST00000506368 CCDC167Q9P0B6 97 aa15.98■□□□□ 0.15
SCLT1-208ENST00000506368 XPR1Q9UBH6 696 aa15.98■□□□□ 0.15
SCLT1-208ENST00000506368 OAZ3Q9UMX2 235 aa15.98■□□□□ 0.15
SCLT1-208ENST00000506368 TRAF6Q9Y4K3 522 aa15.98■□□□□ 0.15
SCLT1-208ENST00000506368 E2F8A0AVK6 867 aa15.98■□□□□ 0.15
SCLT1-208ENST00000506368 MAFO75444 373 aaPredicted RBP15.98■□□□□ 0.15
SCLT1-208ENST00000506368 ALBP02768 609 aa15.98■□□□□ 0.15
SCLT1-208ENST00000506368 TGM1P22735 817 aa15.98■□□□□ 0.15
SCLT1-208ENST00000506368 RFC2P35250 354 aa15.98■□□□□ 0.15
SCLT1-208ENST00000506368 HPCAL1P37235 193 aa15.98■□□□□ 0.15
SCLT1-208ENST00000506368 SERPINB10P48595 397 aa15.98■□□□□ 0.15
SCLT1-208ENST00000506368 TKTL1P51854 596 aa15.98■□□□□ 0.15
SCLT1-208ENST00000506368 C1QTNF8P60827 252 aa15.98■□□□□ 0.15
SCLT1-208ENST00000506368 TOP3AQ13472 1001 aaPredicted RBP15.98■□□□□ 0.15
SCLT1-208ENST00000506368 TARBP2Q15633 366 aaKnown RBP15.98■□□□□ 0.15
SCLT1-208ENST00000506368 PDZD4Q76G19 769 aaPredicted RBP15.98■□□□□ 0.15
SCLT1-208ENST00000506368 ZC3HC1Q86WB0 502 aaKnown RBP15.98■□□□□ 0.15
SCLT1-208ENST00000506368 SNX19Q92543 992 aa15.98■□□□□ 0.15
SCLT1-208ENST00000506368 ATXN7L3BQ96GX2 97 aa15.98■□□□□ 0.15
SCLT1-208ENST00000506368 KCTD15Q96SI1 283 aaPredicted RBP15.98■□□□□ 0.15
SCLT1-208ENST00000506368 RPF1Q9H9Y2 349 aaKnown RBP15.98■□□□□ 0.15
SCLT1-208ENST00000506368 FANCEQ9HB96 536 aa15.98■□□□□ 0.15
SCLT1-208ENST00000506368 SIX4Q9UIU6 781 aa15.98■□□□□ 0.15
SCLT1-208ENST00000506368 TLL2Q9Y6L7 1015 aa15.98■□□□□ 0.15
SCLT1-208ENST00000506368 ANK1P16157 1881 aa15.97■□□□□ 0.15
SCLT1-208ENST00000506368 LSM1O15116 133 aaKnown RBP15.97■□□□□ 0.15
SCLT1-208ENST00000506368 MTSS1O43312 755 aa15.97■□□□□ 0.15
SCLT1-208ENST00000506368 SLC35E2BP0CK96 405 aa15.97■□□□□ 0.15
SCLT1-208ENST00000506368 RPL10P27635 214 aaKnown RBP15.97■□□□□ 0.15
SCLT1-208ENST00000506368 GJA5P36382 358 aa15.97■□□□□ 0.15
SCLT1-208ENST00000506368 RAB10P61026 200 aa15.97■□□□□ 0.15
SCLT1-208ENST00000506368 CPNE9Q8IYJ1 553 aa15.97■□□□□ 0.15
SCLT1-208ENST00000506368 ADGRG5Q8IZF4 528 aa15.97■□□□□ 0.15
SCLT1-208ENST00000506368 ZNF567Q8N184 647 aa15.97■□□□□ 0.15
SCLT1-208ENST00000506368 HPS1Q92902 700 aa15.97■□□□□ 0.15
SCLT1-208ENST00000506368 FBXL20Q96IG2 436 aa15.97■□□□□ 0.15
SCLT1-208ENST00000506368 AGAP2Q99490 1192 aa15.97■□□□□ 0.15
SCLT1-208ENST00000506368 NT5C1AQ9BXI3 368 aa15.97■□□□□ 0.15
SCLT1-208ENST00000506368 MUC3BQ9H195 1237 aa15.97■□□□□ 0.15
SCLT1-208ENST00000506368 HPS4Q9NQG7 708 aa15.97■□□□□ 0.15
SCLT1-208ENST00000506368 THG1LQ9NWX6 298 aaKnown RBP15.97■□□□□ 0.15
SCLT1-208ENST00000506368 GTSE1Q9NYZ3 720 aa15.97■□□□□ 0.15
SCLT1-208ENST00000506368 VWA7Q9Y334 891 aa15.97■□□□□ 0.15
SCLT1-208ENST00000506368 CSADQ9Y600 493 aa15.97■□□□□ 0.15
SCLT1-208ENST00000506368 IGKV6D-21A0A0A0MT36 114 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 CCDC78A2IDD5 438 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms