RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 PIGNO95427 931 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 KLF8O95600 359 aaPredicted RBP7.25□□□□□ -1.25
NUP54-204ENST00000506098 PSMA3P25788 255 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 GKP32189 559 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 MAGEA9P43362 315 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 GRIA4P48058 902 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 GTF2A1P52655 376 aaPredicted RBP7.25□□□□□ -1.25
NUP54-204ENST00000506098 COPAP53621 1224 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 ARL4CP56559 192 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 POLR2LP62875 67 aaKnown RBP7.25□□□□□ -1.25
NUP54-204ENST00000506098 SIGLEC14Q08ET2 396 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 OLIG2Q13516 323 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 SPARCL1Q14515 664 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 HLTFQ14527 1009 aaKnown RBP eCLIP7.25□□□□□ -1.25
NUP54-204ENST00000506098 BRD3Q15059 726 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 PCSK7Q16549 785 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 HIF1AQ16665 826 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 QPCTQ16769 361 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 C11orf91Q3C1V1 193 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 MSS51Q4VC12 460 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 ZNF805Q5CZA5 627 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 ARSIQ5FYB1 569 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 SIRPB2Q5JXA9 342 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 FNBP1LQ5T0N5 605 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 SYCP2LQ5T4T6 812 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 ARMC12Q5T9G4 340 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 BRAT1Q6PJG6 821 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 MAMSTRQ6ZN01 415 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 SYT13Q7L8C5 426 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 DSG4Q86SJ6 1040 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 ZSWIM9Q86XI8 627 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 CAMK1DQ8IU85 385 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 PDIK1LQ8N165 341 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 SIX5Q8N196 739 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 AGGF1Q8N302 714 aaeCLIP7.25□□□□□ -1.25
NUP54-204ENST00000506098 RYBPQ8N488 228 aaPredicted RBP7.25□□□□□ -1.25
NUP54-204ENST00000506098 TXNDC5Q8NBS9 432 aaKnown RBP7.25□□□□□ -1.25
NUP54-204ENST00000506098 PJA1Q8NG27 643 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 OR52K1Q8NGK4 314 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 OR6K2Q8NGY2 324 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 OR2T3Q8NH03 318 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 RPLP0P6Q8NHW5 317 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 PIP4K2CQ8TBX8 421 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 AENQ8WTP8 325 aaKnown RBP7.25□□□□□ -1.25
NUP54-204ENST00000506098 HNRNPLLQ8WVV9 542 aaKnown RBP7.25□□□□□ -1.25
NUP54-204ENST00000506098 FAM131CQ96AQ9 280 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 IFT43Q96FT9 208 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 KLHL32Q96NJ5 620 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 RANBP9Q96S59 729 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 LYSMD1Q96S90 227 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 SRPK1Q96SB4 655 aaKnown RBP7.25□□□□□ -1.25
NUP54-204ENST00000506098 FMO2Q99518 471 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 C19orf43Q9BQ61 176 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 IER2Q9BTL4 223 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 FICDQ9BVA6 458 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 ADGRE3Q9BY15 652 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 TXLNGYQ9BZA5 131 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 IL22Q9GZX6 179 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 ZDHHC6Q9H6R6 413 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 TBC1D17Q9HA65 648 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 LMAN1LQ9HAT1 526 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 ZDHHC4Q9NPG8 344 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 BFARQ9NZS9 450 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 SARDHQ9UL12 918 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 CHKBQ9Y259 395 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 MTF2Q9Y483 593 aaPredicted RBP7.25□□□□□ -1.25
NUP54-204ENST00000506098 PCDHB9Q9Y5E1 797 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 TEX264Q9Y6I9 313 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 ZNF318Q5VUA4 2279 aa7.25□□□□□ -1.25
NUP54-204ENST00000506098 ZDBF2Q9HCK1 2354 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 A0A0J9YYE9 177 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 MAGEB16A2A368 324 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 SDR42E2A6NKP2 422 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 FAM170BA6NMN3 283 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 C16orf96A6NNT2 1141 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 C1QTNF3-AMACRE9PGA6 284 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 GOLGA8MH3BSY2 632 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 BNIP3LO60238 219 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 SYNCRIPO60506 623 aaKnown RBP7.24□□□□□ -1.25
NUP54-204ENST00000506098 RNASEH1O60930 286 aaKnown RBP7.24□□□□□ -1.25
NUP54-204ENST00000506098 ATG13O75143 517 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 USP12O75317 370 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 AVILO75366 819 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 ADH1BP00325 375 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 CPP00450 1065 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 TRBC1P01850 177 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 UGT2B4P06133 528 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 FAM153BP0C7A2 387 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 HOXB2P14652 356 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 TIMP2P16035 220 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 COL9A1P20849 921 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 ADRA1DP25100 572 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 ITGB7P26010 798 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 WASP42768 502 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 CHRNA4P43681 627 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 TNNT3P45378 269 aaPredicted RBP7.24□□□□□ -1.25
NUP54-204ENST00000506098 SUOXP51687 545 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 RPS14P62263 151 aaKnown RBP7.24□□□□□ -1.25
NUP54-204ENST00000506098 ZBTB16Q05516 673 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 DHX9Q08211 1270 aaKnown RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms